RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 MYT1LQ9UL68 1186 aa7.72□□□□□ -1.17
CYCSP28-201ENST00000534284 ZMYND15Q9H091 742 aa7.71□□□□□ -1.18
CYCSP28-201ENST00000534284 MYO15BQ96JP2 1530 aa7.7□□□□□ -1.18
CYCSP28-201ENST00000534284 ZNF316A6NFI3 1004 aaPredicted RBP7.7□□□□□ -1.18
CYCSP28-201ENST00000534284 MINK1Q8N4C8 1332 aaPredicted RBP7.7□□□□□ -1.18
CYCSP28-201ENST00000534284 C2orf72A6NCS6 295 aa7.69□□□□□ -1.18
CYCSP28-201ENST00000534284 RIMBP2O15034 1052 aa7.69□□□□□ -1.18
CYCSP28-201ENST00000534284 UPF1Q92900 1129 aaKnown RBP eCLIP7.69□□□□□ -1.18
CYCSP28-201ENST00000534284 ZSWIM6Q9HCJ5 1215 aa7.69□□□□□ -1.18
CYCSP28-201ENST00000534284 MAP2K5Q13163 448 aa7.68□□□□□ -1.18
CYCSP28-201ENST00000534284 KHSRPQ92945 711 aaKnown RBP eCLIP7.68□□□□□ -1.18
CYCSP28-201ENST00000534284 CCDC102AQ96A19 550 aa7.68□□□□□ -1.18
CYCSP28-201ENST00000534284 FAM117AQ9C073 453 aa7.68□□□□□ -1.18
CYCSP28-201ENST00000534284 RSPH6AQ9H0K4 717 aa7.68□□□□□ -1.18
CYCSP28-201ENST00000534284 GPR37O15354 613 aa7.67□□□□□ -1.18
CYCSP28-201ENST00000534284 ARSIQ5FYB1 569 aa7.67□□□□□ -1.18
CYCSP28-201ENST00000534284 DDRGK1Q96HY6 314 aa7.67□□□□□ -1.18
CYCSP28-201ENST00000534284 IRF6O14896 467 aa7.65□□□□□ -1.18
CYCSP28-201ENST00000534284 GNPATO15228 680 aa7.65□□□□□ -1.18
CYCSP28-201ENST00000534284 TBC1D12O60347 775 aa7.65□□□□□ -1.18
CYCSP28-201ENST00000534284 FCHSD2O94868 740 aa7.65□□□□□ -1.18
CYCSP28-201ENST00000534284 DDX12PQ92771 950 aa7.65□□□□□ -1.18
CYCSP28-201ENST00000534284 TTLL12Q14166 644 aaPredicted RBP7.64□□□□□ -1.19
CYCSP28-201ENST00000534284 HIC1Q14526 733 aa7.64□□□□□ -1.19
CYCSP28-201ENST00000534284 OSBPP22059 807 aa7.63□□□□□ -1.19
CYCSP28-201ENST00000534284 ANKRD13DQ6ZTN6 518 aa7.63□□□□□ -1.19
CYCSP28-201ENST00000534284 AMHR2Q16671 573 aa7.62□□□□□ -1.19
CYCSP28-201ENST00000534284 PARP9Q8IXQ6 854 aa7.62□□□□□ -1.19
CYCSP28-201ENST00000534284 ARID3AQ99856 593 aa7.62□□□□□ -1.19
CYCSP28-201ENST00000534284 KIF3CO14782 793 aa7.61□□□□□ -1.19
CYCSP28-201ENST00000534284 POTEEQ6S8J3 1075 aa7.6□□□□□ -1.19
CYCSP28-201ENST00000534284 PLEKHG3A1L390 1219 aa7.59□□□□□ -1.19
CYCSP28-201ENST00000534284 FECHP22830 423 aa7.59□□□□□ -1.19
CYCSP28-201ENST00000534284 EVI5O60447 810 aa7.58□□□□□ -1.2
CYCSP28-201ENST00000534284 UBTFP17480 764 aaKnown RBP7.58□□□□□ -1.2
CYCSP28-201ENST00000534284 PTGER2P43116 358 aa7.58□□□□□ -1.2
CYCSP28-201ENST00000534284 LSM11P83369 360 aaKnown RBP eCLIP7.58□□□□□ -1.2
CYCSP28-201ENST00000534284 FLIIQ13045 1269 aa7.58□□□□□ -1.2
CYCSP28-201ENST00000534284 OXER1Q8TDS5 423 aa7.58□□□□□ -1.2
CYCSP28-201ENST00000534284 ATP1B4Q9UN42 357 aaPredicted RBP7.58□□□□□ -1.2
CYCSP28-201ENST00000534284 PCMTD1Q96MG8 357 aaPredicted RBP7.57□□□□□ -1.2
CYCSP28-201ENST00000534284 ABCC9O60706 1549 aa7.56□□□□□ -1.2
CYCSP28-201ENST00000534284 PTGDRQ13258 359 aa7.55□□□□□ -1.2
CYCSP28-201ENST00000534284 GIGYF2Q6Y7W6 1299 aaKnown RBP7.55□□□□□ -1.2
CYCSP28-201ENST00000534284 AXIN2Q9Y2T1 843 aa7.55□□□□□ -1.2
CYCSP28-201ENST00000534284 NUDT7P0C024 238 aa7.54□□□□□ -1.2
CYCSP28-201ENST00000534284 GOPCQ9HD26 462 aa7.53□□□□□ -1.2
CYCSP28-201ENST00000534284 PODXL2Q9NZ53 605 aa7.53□□□□□ -1.2
CYCSP28-201ENST00000534284 ARID3CA6NKF2 412 aa7.52□□□□□ -1.21
CYCSP28-201ENST00000534284 APBB1O00213 710 aa7.52□□□□□ -1.21
CYCSP28-201ENST00000534284 LHX6Q9UPM6 363 aa7.52□□□□□ -1.21
CYCSP28-201ENST00000534284 MAP3K7O43318 606 aa7.51□□□□□ -1.21
CYCSP28-201ENST00000534284 MS4A1P11836 297 aa7.51□□□□□ -1.21
CYCSP28-201ENST00000534284 PRIM1P49642 420 aaKnown RBP7.51□□□□□ -1.21
CYCSP28-201ENST00000534284 NACADO15069 1562 aa7.5□□□□□ -1.21
CYCSP28-201ENST00000534284 CLCN1P35523 988 aa7.5□□□□□ -1.21
CYCSP28-201ENST00000534284 RBM33Q96EV2 1170 aaKnown RBP7.5□□□□□ -1.21
CYCSP28-201ENST00000534284 PCDHGA4Q9Y5G9 962 aa7.5□□□□□ -1.21
CYCSP28-201ENST00000534284 MDM2Q00987 491 aaPredicted RBP7.49□□□□□ -1.21
CYCSP28-201ENST00000534284 EPAS1Q99814 870 aa7.49□□□□□ -1.21
CYCSP28-201ENST00000534284 PTCD2Q8WV60 388 aaKnown RBP7.48□□□□□ -1.21
CYCSP28-201ENST00000534284 CDHR5Q9HBB8 845 aa7.48□□□□□ -1.21
CYCSP28-201ENST00000534284 GPCPD1Q9NPB8 672 aa7.48□□□□□ -1.21
CYCSP28-201ENST00000534284 PHF14O94880 888 aa7.47□□□□□ -1.21
CYCSP28-201ENST00000534284 SLC34A2O95436 690 aa7.47□□□□□ -1.21
CYCSP28-201ENST00000534284 PBX2P40425 430 aa7.47□□□□□ -1.21
CYCSP28-201ENST00000534284 EN1Q05925 392 aaPredicted RBP7.47□□□□□ -1.21
CYCSP28-201ENST00000534284 REPIN1Q9BWE0 567 aaKnown RBP7.47□□□□□ -1.21
CYCSP28-201ENST00000534284 C1orf115Q9H7X2 142 aa7.47□□□□□ -1.21
CYCSP28-201ENST00000534284 PLA2G2EQ9NZK7 142 aa7.47□□□□□ -1.21
CYCSP28-201ENST00000534284 SSTR3P32745 418 aaPredicted RBP7.46□□□□□ -1.22
CYCSP28-201ENST00000534284 SH3D19Q5HYK7 790 aa7.46□□□□□ -1.22
CYCSP28-201ENST00000534284 CLUAP1Q96AJ1 413 aa7.46□□□□□ -1.22
CYCSP28-201ENST00000534284 KDM4FA0A1W2PPD8 638 aa7.44□□□□□ -1.22
CYCSP28-201ENST00000534284 TYW1BQ6NUM6 668 aa7.44□□□□□ -1.22
CYCSP28-201ENST00000534284 BEGAINQ9BUH8 593 aa7.44□□□□□ -1.22
CYCSP28-201ENST00000534284 ANO8Q9HCE9 1232 aaPredicted RBP7.44□□□□□ -1.22
CYCSP28-201ENST00000534284 NPDC1Q9NQX5 325 aaPredicted RBP7.44□□□□□ -1.22
CYCSP28-201ENST00000534284 A6NJR5 290 aa7.43□□□□□ -1.22
CYCSP28-201ENST00000534284 ONECUT3O60422 494 aaPredicted RBP7.43□□□□□ -1.22
CYCSP28-201ENST00000534284 SKIV2LQ15477 1246 aaKnown RBP7.43□□□□□ -1.22
CYCSP28-201ENST00000534284 TSR1Q2NL82 804 aaKnown RBP7.43□□□□□ -1.22
CYCSP28-201ENST00000534284 ADGRD1Q6QNK2 874 aa7.43□□□□□ -1.22
CYCSP28-201ENST00000534284 RB1CC1Q8TDY2 1594 aa7.42□□□□□ -1.22
CYCSP28-201ENST00000534284 SCRIBQ14160 1630 aa7.42□□□□□ -1.22
CYCSP28-201ENST00000534284 RAD21O60216 631 aa7.42□□□□□ -1.22
CYCSP28-201ENST00000534284 TRAK2O60296 914 aa7.42□□□□□ -1.22
CYCSP28-201ENST00000534284 DMRTA1Q5VZB9 504 aa7.42□□□□□ -1.22
CYCSP28-201ENST00000534284 POLR3EQ9NVU0 708 aa7.42□□□□□ -1.22
CYCSP28-201ENST00000534284 HCSTQ9UBK5 93 aa7.42□□□□□ -1.22
CYCSP28-201ENST00000534284 PCDHGA10Q9Y5H3 936 aa7.42□□□□□ -1.22
CYCSP28-201ENST00000534284 RSF1Q96T23 1441 aaPredicted RBP7.42□□□□□ -1.22
CYCSP28-201ENST00000534284 ARHGAP33O14559 1287 aa7.41□□□□□ -1.22
CYCSP28-201ENST00000534284 HRO43593 1189 aa7.41□□□□□ -1.22
CYCSP28-201ENST00000534284 OATP04181 439 aa7.41□□□□□ -1.22
CYCSP28-201ENST00000534284 HRCP23327 699 aa7.41□□□□□ -1.22
CYCSP28-201ENST00000534284 TRIM26Q12899 539 aaPredicted RBP7.41□□□□□ -1.22
CYCSP28-201ENST00000534284 MCM6Q14566 821 aa7.41□□□□□ -1.22
CYCSP28-201ENST00000534284 FAM161AQ3B820 660 aa7.41□□□□□ -1.22
CYCSP28-201ENST00000534284 CCDC82Q8N4S0 544 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms