RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 ABCC5O15440 1437 aa15.03■□□□□ -0
LDLRAD3-206ENST00000534091 ZMYM3Q14202 1370 aa15.03■□□□□ -0
LDLRAD3-206ENST00000534091 RNF17Q9BXT8 1623 aaKnown RBP15.03■□□□□ -0
LDLRAD3-206ENST00000534091 HFM1A2PYH4 1435 aa15.02■□□□□ -0
LDLRAD3-206ENST00000534091 UHRF1BP1Q6BDS2 1440 aa15.02■□□□□ -0
LDLRAD3-206ENST00000534091 SETD5Q9C0A6 1442 aa15.02■□□□□ -0
LDLRAD3-206ENST00000534091 KIF3BO15066 747 aa15.02■□□□□ -0
LDLRAD3-206ENST00000534091 GGT6Q6P531 493 aa15.02■□□□□ -0
LDLRAD3-206ENST00000534091 CLTCQ00610 1675 aaKnown RBP15.02□□□□□ -0.01
LDLRAD3-206ENST00000534091 KDM5DQ9BY66 1539 aa15.02□□□□□ -0.01
LDLRAD3-206ENST00000534091 HRCP23327 699 aa15.01□□□□□ -0.01
LDLRAD3-206ENST00000534091 ERBINQ96RT1 1412 aa15□□□□□ -0.01
LDLRAD3-206ENST00000534091 ROCK1Q13464 1354 aa15□□□□□ -0.01
LDLRAD3-206ENST00000534091 ZC3H13Q5T200 1668 aaKnown RBP15□□□□□ -0.01
LDLRAD3-206ENST00000534091 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
LDLRAD3-206ENST00000534091 ANKRD30AQ9BXX3 1397 aa14.99□□□□□ -0.01
LDLRAD3-206ENST00000534091 ITGAEP38570 1179 aa14.99□□□□□ -0.01
LDLRAD3-206ENST00000534091 ADGRL2O95490 1459 aa14.99□□□□□ -0.01
LDLRAD3-206ENST00000534091 KIF15Q9NS87 1388 aa14.98□□□□□ -0.01
LDLRAD3-206ENST00000534091 RAB3GAP2Q9H2M9 1393 aa14.98□□□□□ -0.01
LDLRAD3-206ENST00000534091 ZEB1P37275 1124 aaPredicted RBP14.97□□□□□ -0.01
LDLRAD3-206ENST00000534091 NAIPQ13075 1403 aa14.97□□□□□ -0.01
LDLRAD3-206ENST00000534091 WASHC2CQ9Y4E1 1318 aa14.96□□□□□ -0.01
LDLRAD3-206ENST00000534091 NCOA1Q15788 1441 aa14.96□□□□□ -0.01
LDLRAD3-206ENST00000534091 PZPP20742 1482 aa14.95□□□□□ -0.02
LDLRAD3-206ENST00000534091 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
LDLRAD3-206ENST00000534091 ZNF142P52746 1687 aaPredicted RBP14.94□□□□□ -0.02
LDLRAD3-206ENST00000534091 ILDR1Q86SU0 546 aaPredicted RBP14.94□□□□□ -0.02
LDLRAD3-206ENST00000534091 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
LDLRAD3-206ENST00000534091 PRDM15P57071 1507 aaPredicted RBP14.93□□□□□ -0.02
LDLRAD3-206ENST00000534091 DEPDC5O75140 1603 aa14.93□□□□□ -0.02
LDLRAD3-206ENST00000534091 DHX57Q6P158 1386 aaKnown RBP14.93□□□□□ -0.02
LDLRAD3-206ENST00000534091 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
LDLRAD3-206ENST00000534091 ACIN1Q9UKV3 1341 aaKnown RBP14.92□□□□□ -0.02
LDLRAD3-206ENST00000534091 MROH1Q8NDA8 1641 aa14.92□□□□□ -0.02
LDLRAD3-206ENST00000534091 CCER1Q8TC90 406 aaPredicted RBP14.92□□□□□ -0.02
LDLRAD3-206ENST00000534091 ABCC3O15438 1527 aa14.92□□□□□ -0.02
LDLRAD3-206ENST00000534091 RRP7BPQ9NSQ0 103 aa14.91□□□□□ -0.02
LDLRAD3-206ENST00000534091 ARHGAP31Q2M1Z3 1444 aa14.91□□□□□ -0.02
LDLRAD3-206ENST00000534091 KANK1Q14678 1352 aa14.9□□□□□ -0.02
LDLRAD3-206ENST00000534091 HSPA2P54652 639 aa14.9□□□□□ -0.02
LDLRAD3-206ENST00000534091 MYO3AQ8NEV4 1616 aa14.9□□□□□ -0.02
LDLRAD3-206ENST00000534091 CEP170BQ9Y4F5 1589 aaPredicted RBP14.89□□□□□ -0.03
LDLRAD3-206ENST00000534091 PLA2R1Q13018 1463 aa14.89□□□□□ -0.03
LDLRAD3-206ENST00000534091 NLRP1Q9C000 1473 aa14.89□□□□□ -0.03
LDLRAD3-206ENST00000534091 LMTK2Q8IWU2 1503 aa14.88□□□□□ -0.03
LDLRAD3-206ENST00000534091 A2ML1A8K2U0 1454 aa14.88□□□□□ -0.03
LDLRAD3-206ENST00000534091 TNRQ92752 1358 aa14.87□□□□□ -0.03
LDLRAD3-206ENST00000534091 SPATA31D1Q6ZQQ2 1576 aa14.87□□□□□ -0.03
LDLRAD3-206ENST00000534091 PTPRTO14522 1441 aa14.87□□□□□ -0.03
LDLRAD3-206ENST00000534091 STRCQ7RTU9 1775 aa14.87□□□□□ -0.03
LDLRAD3-206ENST00000534091 CAMSAP1Q5T5Y3 1602 aa14.87□□□□□ -0.03
LDLRAD3-206ENST00000534091 VWDEQ8N2E2 1590 aa14.86□□□□□ -0.03
LDLRAD3-206ENST00000534091 ANKRD50Q9ULJ7 1429 aa14.86□□□□□ -0.03
LDLRAD3-206ENST00000534091 CHIC2Q9UKJ5 165 aa14.86□□□□□ -0.03
LDLRAD3-206ENST00000534091 PKD2Q13563 968 aa14.85□□□□□ -0.03
LDLRAD3-206ENST00000534091 CEP152O94986 1710 aa14.85□□□□□ -0.03
LDLRAD3-206ENST00000534091 ERVK-7P63135 1459 aa14.82□□□□□ -0.04
LDLRAD3-206ENST00000534091 FBXO31Q5XUX0 539 aaPredicted RBP14.81□□□□□ -0.04
LDLRAD3-206ENST00000534091 THEMISQ8N1K5 641 aaPredicted RBP14.81□□□□□ -0.04
LDLRAD3-206ENST00000534091 RPRD2Q5VT52 1461 aaKnown RBP14.81□□□□□ -0.04
LDLRAD3-206ENST00000534091 UNC13BO14795 1591 aa14.8□□□□□ -0.04
LDLRAD3-206ENST00000534091 UGGT1Q9NYU2 1555 aa14.79□□□□□ -0.04
LDLRAD3-206ENST00000534091 KDM5AP29375 1690 aaKnown RBP14.78□□□□□ -0.04
LDLRAD3-206ENST00000534091 EFCAB6Q5THR3 1501 aa14.78□□□□□ -0.04
LDLRAD3-206ENST00000534091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.77□□□□□ -0.05
LDLRAD3-206ENST00000534091 TET3O43151 1660 aa14.77□□□□□ -0.05
LDLRAD3-206ENST00000534091 POLR1AO95602 1720 aaPredicted RBP14.76□□□□□ -0.05
LDLRAD3-206ENST00000534091 CFAP65Q6ZU64 1925 aaKnown RBP14.76□□□□□ -0.05
LDLRAD3-206ENST00000534091 NOS1P29475 1434 aa14.75□□□□□ -0.05
LDLRAD3-206ENST00000534091 IQGAP3Q86VI3 1631 aa14.74□□□□□ -0.05
LDLRAD3-206ENST00000534091 ANKLE2Q86XL3 938 aa14.73□□□□□ -0.05
LDLRAD3-206ENST00000534091 SLC52A1Q9NWF4 448 aa14.73□□□□□ -0.05
LDLRAD3-206ENST00000534091 MED14O60244 1454 aa14.73□□□□□ -0.05
LDLRAD3-206ENST00000534091 UBR1Q8IWV7 1749 aa14.72□□□□□ -0.05
LDLRAD3-206ENST00000534091 IQSEC2Q5JU85 1478 aa14.72□□□□□ -0.05
LDLRAD3-206ENST00000534091 FBXO41Q8TF61 875 aa14.71□□□□□ -0.05
LDLRAD3-206ENST00000534091 SLIT1O75093 1534 aa14.71□□□□□ -0.06
LDLRAD3-206ENST00000534091 NCKAP5LQ9HCH0 1330 aa14.7□□□□□ -0.06
LDLRAD3-206ENST00000534091 CERKQ8TCT0 537 aa14.7□□□□□ -0.06
LDLRAD3-206ENST00000534091 ARHGAP23Q9P227 1491 aa14.69□□□□□ -0.06
LDLRAD3-206ENST00000534091 NEURL4Q96JN8 1562 aa14.68□□□□□ -0.06
LDLRAD3-206ENST00000534091 NUP155O75694 1391 aa14.68□□□□□ -0.06
LDLRAD3-206ENST00000534091 SYNMO15061 1565 aa14.68□□□□□ -0.06
LDLRAD3-206ENST00000534091 PIK3C2BO00750 1634 aa14.67□□□□□ -0.06
LDLRAD3-206ENST00000534091 LTBP4Q8N2S1 1624 aa14.67□□□□□ -0.06
LDLRAD3-206ENST00000534091 TRIM52Q96A61 297 aa14.67□□□□□ -0.06
LDLRAD3-206ENST00000534091 MPHOSPH9Q99550 1183 aa14.67□□□□□ -0.06
LDLRAD3-206ENST00000534091 NPHP4O75161 1426 aaPredicted RBP14.66□□□□□ -0.06
LDLRAD3-206ENST00000534091 IDI1Q13907 227 aa14.66□□□□□ -0.06
LDLRAD3-206ENST00000534091 E9PCH4 1651 aa14.65□□□□□ -0.06
LDLRAD3-206ENST00000534091 SCAF11Q99590 1463 aaKnown RBP14.65□□□□□ -0.06
LDLRAD3-206ENST00000534091 STAG3Q9UJ98 1225 aa14.65□□□□□ -0.06
LDLRAD3-206ENST00000534091 EID1Q9Y6B2 187 aa14.65□□□□□ -0.06
LDLRAD3-206ENST00000534091 ADGRB3O60242 1522 aa14.65□□□□□ -0.06
LDLRAD3-206ENST00000534091 IQGAP1P46940 1657 aa14.65□□□□□ -0.06
LDLRAD3-206ENST00000534091 TMEM2Q9UHN6 1383 aa14.64□□□□□ -0.07
LDLRAD3-206ENST00000534091 TIMELESSQ9UNS1 1208 aa14.64□□□□□ -0.07
LDLRAD3-206ENST00000534091 CPS1P31327 1500 aa14.63□□□□□ -0.07
LDLRAD3-206ENST00000534091 HDGFP51858 240 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms