RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 VWDEQ8N2E2 1590 aa20.34■□□□□ 0.85
SVIP-205ENST00000533774 STRCP1A6NGW2 1772 aa20.32■□□□□ 0.84
SVIP-205ENST00000533774 TOM1O60784 492 aa20.32■□□□□ 0.84
SVIP-205ENST00000533774 FYCO1Q9BQS8 1478 aa20.3■□□□□ 0.84
SVIP-205ENST00000533774 FBXO31Q5XUX0 539 aaPredicted RBP20.3■□□□□ 0.84
SVIP-205ENST00000533774 PLEKHH2Q8IVE3 1493 aa20.29■□□□□ 0.84
SVIP-205ENST00000533774 CFDP1Q9UEE9 299 aaPredicted RBP20.27■□□□□ 0.84
SVIP-205ENST00000533774 ZNF644Q9H582 1327 aaPredicted RBP20.27■□□□□ 0.83
SVIP-205ENST00000533774 TNRQ92752 1358 aa20.26■□□□□ 0.83
SVIP-205ENST00000533774 MBD5Q9P267 1494 aa20.24■□□□□ 0.83
SVIP-205ENST00000533774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.24■□□□□ 0.83
SVIP-205ENST00000533774 CCNB3Q8WWL7 1395 aa20.23■□□□□ 0.83
SVIP-205ENST00000533774 PZPP20742 1482 aa20.23■□□□□ 0.83
SVIP-205ENST00000533774 DEPDC5O75140 1603 aa20.22■□□□□ 0.83
SVIP-205ENST00000533774 TIAM1Q13009 1591 aa20.21■□□□□ 0.83
SVIP-205ENST00000533774 MED14O60244 1454 aa20.21■□□□□ 0.83
SVIP-205ENST00000533774 IQGAP1P46940 1657 aa20.21■□□□□ 0.83
SVIP-205ENST00000533774 DHX29Q7Z478 1369 aaKnown RBP20.21■□□□□ 0.83
SVIP-205ENST00000533774 NPHP4O75161 1426 aaPredicted RBP20.19■□□□□ 0.82
SVIP-205ENST00000533774 KDM5DQ9BY66 1539 aa20.19■□□□□ 0.82
SVIP-205ENST00000533774 ANKLE2Q86XL3 938 aa20.19■□□□□ 0.82
SVIP-205ENST00000533774 RTEL1-TNFRSF6BF6WH68 1400 aa20.19■□□□□ 0.82
SVIP-205ENST00000533774 RGS17Q9UGC6 210 aaPredicted RBP20.18■□□□□ 0.82
SVIP-205ENST00000533774 LRRC7Q96NW7 1537 aa20.17■□□□□ 0.82
SVIP-205ENST00000533774 UGGT1Q9NYU2 1555 aa20.17■□□□□ 0.82
SVIP-205ENST00000533774 XIRP1Q702N8 1843 aaKnown RBP20.16■□□□□ 0.82
SVIP-205ENST00000533774 KIF3BO15066 747 aa20.16■□□□□ 0.82
SVIP-205ENST00000533774 MIA2Q96PC5 1412 aa20.16■□□□□ 0.82
SVIP-205ENST00000533774 RNF17Q9BXT8 1623 aaKnown RBP20.16■□□□□ 0.82
SVIP-205ENST00000533774 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
SVIP-205ENST00000533774 ZC3H13Q5T200 1668 aaKnown RBP20.14■□□□□ 0.81
SVIP-205ENST00000533774 NLRP1Q9C000 1473 aa20.14■□□□□ 0.81
SVIP-205ENST00000533774 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
SVIP-205ENST00000533774 FAM135AQ9P2D6 1515 aa20.13■□□□□ 0.81
SVIP-205ENST00000533774 SYNMO15061 1565 aa20.12■□□□□ 0.81
SVIP-205ENST00000533774 MTUS2Q5JR59 1369 aa20.12■□□□□ 0.81
SVIP-205ENST00000533774 PIAS4Q8N2W9 510 aaPredicted RBP20.12■□□□□ 0.81
SVIP-205ENST00000533774 WASHC2CQ9Y4E1 1318 aa20.1■□□□□ 0.81
SVIP-205ENST00000533774 CCDC141Q6ZP82 1450 aa20.06■□□□□ 0.8
SVIP-205ENST00000533774 UBR1Q8IWV7 1749 aa20.06■□□□□ 0.8
SVIP-205ENST00000533774 EHBP1L1Q8N3D4 1523 aa20.06■□□□□ 0.8
SVIP-205ENST00000533774 CAMSAP2Q08AD1 1489 aa20.04■□□□□ 0.8
SVIP-205ENST00000533774 CEP162Q5TB80 1403 aa20.03■□□□□ 0.8
SVIP-205ENST00000533774 ABCC3O15438 1527 aa20.02■□□□□ 0.8
SVIP-205ENST00000533774 CEP152O94986 1710 aa20.02■□□□□ 0.8
SVIP-205ENST00000533774 POTEAQ6S8J7 498 aa20.02■□□□□ 0.8
SVIP-205ENST00000533774 ERVK-7P63135 1459 aa20■□□□□ 0.79
SVIP-205ENST00000533774 NCOA2Q15596 1464 aa19.99■□□□□ 0.79
SVIP-205ENST00000533774 SETD1AO15047 1707 aaKnown RBP19.99■□□□□ 0.79
SVIP-205ENST00000533774 MROH1Q8NDA8 1641 aa19.99■□□□□ 0.79
SVIP-205ENST00000533774 ARHGEF5Q12774 1597 aa19.98■□□□□ 0.79
SVIP-205ENST00000533774 LTKP29376 864 aa19.97■□□□□ 0.79
SVIP-205ENST00000533774 SCAF11Q99590 1463 aaKnown RBP19.96■□□□□ 0.79
SVIP-205ENST00000533774 ARHGAP23Q9P227 1491 aa19.95■□□□□ 0.78
SVIP-205ENST00000533774 SLIT1O75093 1534 aa19.93■□□□□ 0.78
SVIP-205ENST00000533774 FAM135BQ49AJ0 1406 aa19.93■□□□□ 0.78
SVIP-205ENST00000533774 EIF2AK4Q9P2K8 1649 aaKnown RBP19.92■□□□□ 0.78
SVIP-205ENST00000533774 ROBO1Q9Y6N7 1651 aa19.92■□□□□ 0.78
SVIP-205ENST00000533774 RSPH4AQ5TD94 716 aa19.92■□□□□ 0.78
SVIP-205ENST00000533774 MAST1Q9Y2H9 1570 aa19.91■□□□□ 0.78
SVIP-205ENST00000533774 TXNDC2Q86VQ3 553 aa19.89■□□□□ 0.77
SVIP-205ENST00000533774 PIK3C2BO00750 1634 aa19.88■□□□□ 0.77
SVIP-205ENST00000533774 TSPY4P0CV99 314 aa19.87■□□□□ 0.77
SVIP-205ENST00000533774 TSPY10P0CW01 314 aa19.87■□□□□ 0.77
SVIP-205ENST00000533774 MAP3K1Q13233 1512 aa19.86■□□□□ 0.77
SVIP-205ENST00000533774 TMEM94Q12767 1356 aa19.84■□□□□ 0.77
SVIP-205ENST00000533774 RBM33Q96EV2 1170 aaKnown RBP19.83■□□□□ 0.77
SVIP-205ENST00000533774 PHLPP1O60346 1717 aa19.82■□□□□ 0.76
SVIP-205ENST00000533774 TET3O43151 1660 aa19.81■□□□□ 0.76
SVIP-205ENST00000533774 ARHGAP31Q2M1Z3 1444 aa19.79■□□□□ 0.76
SVIP-205ENST00000533774 TMEM2Q9UHN6 1383 aa19.79■□□□□ 0.76
SVIP-205ENST00000533774 PRDM15P57071 1507 aaPredicted RBP19.78■□□□□ 0.76
SVIP-205ENST00000533774 EID1Q9Y6B2 187 aa19.78■□□□□ 0.76
SVIP-205ENST00000533774 DUOX2Q9NRD8 1548 aa19.77■□□□□ 0.76
SVIP-205ENST00000533774 KCNA6P17658 529 aa19.77■□□□□ 0.76
SVIP-205ENST00000533774 KDM5AP29375 1690 aaKnown RBP19.77■□□□□ 0.76
SVIP-205ENST00000533774 NWD1Q149M9 1564 aa19.75■□□□□ 0.75
SVIP-205ENST00000533774 PROSER2Q86WR7 435 aaPredicted RBP19.75■□□□□ 0.75
SVIP-205ENST00000533774 SLC26A8Q96RN1 970 aa19.75■□□□□ 0.75
SVIP-205ENST00000533774 EFCAB6Q5THR3 1501 aa19.74■□□□□ 0.75
SVIP-205ENST00000533774 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
SVIP-205ENST00000533774 COL16A1Q07092 1604 aaPredicted RBP19.73■□□□□ 0.75
SVIP-205ENST00000533774 MYO5BQ9ULV0 1848 aa19.72■□□□□ 0.75
SVIP-205ENST00000533774 LRP6O75581 1613 aa19.72■□□□□ 0.75
SVIP-205ENST00000533774 CHD2O14647 1828 aaKnown RBP19.72■□□□□ 0.75
SVIP-205ENST00000533774 CROCC2H7BZ55 1655 aa19.71■□□□□ 0.75
SVIP-205ENST00000533774 IDI1Q13907 227 aa19.71■□□□□ 0.75
SVIP-205ENST00000533774 UPF1Q92900 1129 aaKnown RBP eCLIP19.71■□□□□ 0.75
SVIP-205ENST00000533774 NKTRP30414 1462 aaKnown RBP19.7■□□□□ 0.74
SVIP-205ENST00000533774 JCADQ9P266 1359 aa19.7■□□□□ 0.74
SVIP-205ENST00000533774 SLAIN2Q9P270 581 aa19.68■□□□□ 0.74
SVIP-205ENST00000533774 KIF15Q9NS87 1388 aa19.68■□□□□ 0.74
SVIP-205ENST00000533774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
SVIP-205ENST00000533774 STAG3Q9UJ98 1225 aa19.67■□□□□ 0.74
SVIP-205ENST00000533774 KANK4Q5T7N3 995 aaPredicted RBP19.66■□□□□ 0.74
SVIP-205ENST00000533774 MSH6P52701 1360 aa19.66■□□□□ 0.74
SVIP-205ENST00000533774 MYOM3Q5VTT5 1437 aa19.66■□□□□ 0.74
SVIP-205ENST00000533774 ERBINQ96RT1 1412 aa19.66■□□□□ 0.74
SVIP-205ENST00000533774 RRP7BPQ9NSQ0 103 aa19.65■□□□□ 0.74
SVIP-205ENST00000533774 ADGRB3O60242 1522 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms