RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 C3P01024 1663 aa32.93■■■□□ 2.86
VPS51-212ENST00000533656 RRP7BPQ9NSQ0 103 aa32.92■■■□□ 2.86
VPS51-212ENST00000533656 ERBINQ96RT1 1412 aa32.91■■■□□ 2.86
VPS51-212ENST00000533656 EIF2AK4Q9P2K8 1649 aaKnown RBP32.85■■■□□ 2.85
VPS51-212ENST00000533656 HFM1A2PYH4 1435 aa32.83■■■□□ 2.85
VPS51-212ENST00000533656 ANKRD50Q9ULJ7 1429 aa32.83■■■□□ 2.85
VPS51-212ENST00000533656 TRIM26Q12899 539 aaPredicted RBP32.82■■■□□ 2.84
VPS51-212ENST00000533656 NAIPQ13075 1403 aa32.78■■■□□ 2.84
VPS51-212ENST00000533656 SETD1BQ9UPS6 1966 aaKnown RBP32.78■■■□□ 2.84
VPS51-212ENST00000533656 KIF3BO15066 747 aa32.76■■■□□ 2.83
VPS51-212ENST00000533656 GCC2Q8IWJ2 1684 aa32.75■■■□□ 2.83
VPS51-212ENST00000533656 STRCQ7RTU9 1775 aa32.75■■■□□ 2.83
VPS51-212ENST00000533656 PPP6R1Q9UPN7 881 aa32.74■■■□□ 2.83
VPS51-212ENST00000533656 MROH2AA6NES4 1674 aa32.74■■■□□ 2.83
VPS51-212ENST00000533656 RNF17Q9BXT8 1623 aaKnown RBP32.73■■■□□ 2.83
VPS51-212ENST00000533656 UHRF1BP1Q6BDS2 1440 aa32.71■■■□□ 2.83
VPS51-212ENST00000533656 CLTCQ00610 1675 aaKnown RBP32.71■■■□□ 2.83
VPS51-212ENST00000533656 FAM135AQ9P2D6 1515 aa32.71■■■□□ 2.83
VPS51-212ENST00000533656 CNTLNQ9NXG0 1405 aa32.68■■■□□ 2.82
VPS51-212ENST00000533656 GGT6Q6P531 493 aa32.67■■■□□ 2.82
VPS51-212ENST00000533656 ESF1Q9H501 851 aaKnown RBP32.66■■■□□ 2.82
VPS51-212ENST00000533656 DEPDC5O75140 1603 aa32.66■■■□□ 2.82
VPS51-212ENST00000533656 ACIN1Q9UKV3 1341 aaKnown RBP32.65■■■□□ 2.82
VPS51-212ENST00000533656 PRDM15P57071 1507 aaPredicted RBP32.65■■■□□ 2.82
VPS51-212ENST00000533656 FBXO41Q8TF61 875 aa32.64■■■□□ 2.82
VPS51-212ENST00000533656 SETD5Q9C0A6 1442 aa32.63■■■□□ 2.81
VPS51-212ENST00000533656 KANK1Q14678 1352 aa32.61■■■□□ 2.81
VPS51-212ENST00000533656 MROH1Q8NDA8 1641 aa32.61■■■□□ 2.81
VPS51-212ENST00000533656 UNC13BO14795 1591 aa32.59■■■□□ 2.81
VPS51-212ENST00000533656 KDM5DQ9BY66 1539 aa32.59■■■□□ 2.81
VPS51-212ENST00000533656 ZC3H13Q5T200 1668 aaKnown RBP32.55■■■□□ 2.8
VPS51-212ENST00000533656 ZMYM3Q14202 1370 aa32.55■■■□□ 2.8
VPS51-212ENST00000533656 WASHC2CQ9Y4E1 1318 aa32.54■■■□□ 2.8
VPS51-212ENST00000533656 VWDEQ8N2E2 1590 aa32.53■■■□□ 2.8
VPS51-212ENST00000533656 NPATQ14207 1427 aa32.52■■■□□ 2.8
VPS51-212ENST00000533656 MYO3AQ8NEV4 1616 aa32.52■■■□□ 2.8
VPS51-212ENST00000533656 HRCP23327 699 aa32.52■■■□□ 2.8
VPS51-212ENST00000533656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.52■■■□□ 2.84e-6■□□□□ 8.4
VPS51-212ENST00000533656 ABCC3O15438 1527 aa32.51■■■□□ 2.8
VPS51-212ENST00000533656 LMTK2Q8IWU2 1503 aa32.51■■■□□ 2.79
VPS51-212ENST00000533656 RAB3GAP2Q9H2M9 1393 aa32.5■■■□□ 2.79
VPS51-212ENST00000533656 ZNF142P52746 1687 aaPredicted RBP32.49■■■□□ 2.79
VPS51-212ENST00000533656 NUP155O75694 1391 aa32.47■■■□□ 2.79
VPS51-212ENST00000533656 IQGAP3Q86VI3 1631 aa32.46■■■□□ 2.79
VPS51-212ENST00000533656 CAMSAP1Q5T5Y3 1602 aa32.44■■■□□ 2.78
VPS51-212ENST00000533656 CERKQ8TCT0 537 aa32.43■■■□□ 2.78
VPS51-212ENST00000533656 TRIM52Q96A61 297 aa32.41■■■□□ 2.78
VPS51-212ENST00000533656 ARHGAP31Q2M1Z3 1444 aa32.41■■■□□ 2.78
VPS51-212ENST00000533656 CEP170BQ9Y4F5 1589 aaPredicted RBP32.4■■■□□ 2.78
VPS51-212ENST00000533656 PTPRTO14522 1441 aa32.39■■■□□ 2.78
VPS51-212ENST00000533656 CEP152O94986 1710 aa32.39■■■□□ 2.78
VPS51-212ENST00000533656 PZPP20742 1482 aa32.37■■■□□ 2.77
VPS51-212ENST00000533656 DMRT2Q9Y5R5 561 aa32.37■■■□□ 2.77
VPS51-212ENST00000533656 TET3O43151 1660 aa32.37■■■□□ 2.77
VPS51-212ENST00000533656 EFCAB6Q5THR3 1501 aa32.36■■■□□ 2.77
VPS51-212ENST00000533656 PCGF6Q9BYE7 350 aa32.34■■■□□ 2.77
VPS51-212ENST00000533656 RPRD2Q5VT52 1461 aaKnown RBP32.34■■■□□ 2.77
VPS51-212ENST00000533656 LTBP4Q8N2S1 1624 aa32.29■■■□□ 2.76
VPS51-212ENST00000533656 SLC4A1APQ9BWU0 796 aaKnown RBP32.28■■■□□ 2.76
VPS51-212ENST00000533656 NCKAP5LQ9HCH0 1330 aa32.26■■■□□ 2.75
VPS51-212ENST00000533656 PLA2R1Q13018 1463 aa32.25■■■□□ 2.75
VPS51-212ENST00000533656 A2ML1A8K2U0 1454 aa32.23■■■□□ 2.75
VPS51-212ENST00000533656 ERVK-7P63135 1459 aa32.23■■■□□ 2.75
VPS51-212ENST00000533656 FBXO31Q5XUX0 539 aaPredicted RBP32.23■■■□□ 2.75
VPS51-212ENST00000533656 MPHOSPH9Q99550 1183 aa32.23■■■□□ 2.75
VPS51-212ENST00000533656 SPATA31D1Q6ZQQ2 1576 aa32.23■■■□□ 2.75
VPS51-212ENST00000533656 E9PCH4 1651 aa32.2■■■□□ 2.74
VPS51-212ENST00000533656 PKD2Q13563 968 aa32.19■■■□□ 2.74
VPS51-212ENST00000533656 TNRQ92752 1358 aa32.19■■■□□ 2.74
VPS51-212ENST00000533656 NOS1P29475 1434 aa32.18■■■□□ 2.74
VPS51-212ENST00000533656 POLR1AO95602 1720 aaPredicted RBP32.18■■■□□ 2.74
VPS51-212ENST00000533656 NEURL4Q96JN8 1562 aa32.12■■■□□ 2.73
VPS51-212ENST00000533656 NLRP1Q9C000 1473 aa32.1■■■□□ 2.73
VPS51-212ENST00000533656 CFAP65Q6ZU64 1925 aaKnown RBP32.1■■■□□ 2.73
VPS51-212ENST00000533656 ZNF335Q9H4Z2 1342 aaPredicted RBP32.09■■■□□ 2.73
VPS51-212ENST00000533656 SLC52A1Q9NWF4 448 aa32.08■■■□□ 2.73
VPS51-212ENST00000533656 SYNMO15061 1565 aa32.06■■■□□ 2.72
VPS51-212ENST00000533656 SPHKAPQ2M3C7 1700 aa32.06■■■□□ 2.72
VPS51-212ENST00000533656 TRPM2O94759 1503 aa32.05■■■□□ 2.72
VPS51-212ENST00000533656 IQSEC2Q5JU85 1478 aa32.04■■■□□ 2.72
VPS51-212ENST00000533656 UGGT1Q9NYU2 1555 aa32.02■■■□□ 2.72
VPS51-212ENST00000533656 FOXD1Q16676 465 aa31.99■■■□□ 2.71
VPS51-212ENST00000533656 DHX57Q6P158 1386 aaKnown RBP31.98■■■□□ 2.71
VPS51-212ENST00000533656 PIK3C2BO00750 1634 aa31.98■■■□□ 2.71
VPS51-212ENST00000533656 IDI1Q13907 227 aa31.95■■■□□ 2.71
VPS51-212ENST00000533656 ANKRD30BQ9BXX2 1392 aa31.94■■■□□ 2.7
VPS51-212ENST00000533656 UBR1Q8IWV7 1749 aa31.94■■■□□ 2.7
VPS51-212ENST00000533656 CCDC144AA2RUR9 1427 aa31.93■■■□□ 2.7
VPS51-212ENST00000533656 KDM5AP29375 1690 aaKnown RBP31.92■■■□□ 2.7
VPS51-212ENST00000533656 ADGRB3O60242 1522 aa31.9■■■□□ 2.7
VPS51-212ENST00000533656 IQGAP1P46940 1657 aa31.89■■■□□ 2.7
VPS51-212ENST00000533656 CLTCL1P53675 1640 aa31.89■■■□□ 2.7
VPS51-212ENST00000533656 THEMISQ8N1K5 641 aaPredicted RBP31.87■■■□□ 2.69
VPS51-212ENST00000533656 STAG3Q9UJ98 1225 aa31.87■■■□□ 2.69
VPS51-212ENST00000533656 MED14O60244 1454 aa31.86■■■□□ 2.69
VPS51-212ENST00000533656 NPHP4O75161 1426 aaPredicted RBP31.84■■■□□ 2.69
VPS51-212ENST00000533656 ANKLE2Q86XL3 938 aa31.84■■■□□ 2.69
VPS51-212ENST00000533656 STRCP1A6NGW2 1772 aa31.82■■■□□ 2.68
VPS51-212ENST00000533656 TMEM131LA2VDJ0 1609 aa31.82■■■□□ 2.68
VPS51-212ENST00000533656 CPS1P31327 1500 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms