RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 PTPRKQ15262 1439 aa26.01■■□□□ 1.75
FGFR1-239ENST00000533619 ROCK1Q13464 1354 aa26■■□□□ 1.75
FGFR1-239ENST00000533619 PLPPR3Q6T4P5 718 aa25.98■■□□□ 1.75
FGFR1-239ENST00000533619 MROH2AA6NES4 1674 aa25.98■■□□□ 1.75
FGFR1-239ENST00000533619 FAM135AQ9P2D6 1515 aa25.98■■□□□ 1.75
FGFR1-239ENST00000533619 RNF17Q9BXT8 1623 aaKnown RBP25.96■■□□□ 1.75
FGFR1-239ENST00000533619 WASHC2CQ9Y4E1 1318 aa25.96■■□□□ 1.75
FGFR1-239ENST00000533619 CLTCQ00610 1675 aaKnown RBP25.96■■□□□ 1.75
FGFR1-239ENST00000533619 ZMYM3Q14202 1370 aa25.95■■□□□ 1.75
FGFR1-239ENST00000533619 CEBPAP49715 358 aaPredicted RBP25.95■■□□□ 1.74
FGFR1-239ENST00000533619 C3P01024 1663 aa25.93■■□□□ 1.74
FGFR1-239ENST00000533619 SETD1BQ9UPS6 1966 aaKnown RBP25.93■■□□□ 1.74
FGFR1-239ENST00000533619 ANKRD50Q9ULJ7 1429 aa25.93■■□□□ 1.74
FGFR1-239ENST00000533619 KDM5DQ9BY66 1539 aa25.92■■□□□ 1.74
FGFR1-239ENST00000533619 KANK1Q14678 1352 aa25.88■■□□□ 1.73
FGFR1-239ENST00000533619 ZC3H13Q5T200 1668 aaKnown RBP25.87■■□□□ 1.73
FGFR1-239ENST00000533619 DEPDC5O75140 1603 aa25.86■■□□□ 1.73
FGFR1-239ENST00000533619 MROH1Q8NDA8 1641 aa25.86■■□□□ 1.73
FGFR1-239ENST00000533619 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.86■■□□□ 1.733e-7■■■□□ 15.6
FGFR1-239ENST00000533619 PRDM15P57071 1507 aaPredicted RBP25.85■■□□□ 1.73
FGFR1-239ENST00000533619 NPATQ14207 1427 aa25.84■■□□□ 1.73
FGFR1-239ENST00000533619 ABCC3O15438 1527 aa25.83■■□□□ 1.72
FGFR1-239ENST00000533619 PREX1Q8TCU6 1659 aa25.8■■□□□ 1.72
FGFR1-239ENST00000533619 CEP152O94986 1710 aa25.79■■□□□ 1.72
FGFR1-239ENST00000533619 PZPP20742 1482 aa25.79■■□□□ 1.72
FGFR1-239ENST00000533619 UHRF1BP1Q6BDS2 1440 aa25.77■■□□□ 1.72
FGFR1-239ENST00000533619 CAMSAP1Q5T5Y3 1602 aa25.75■■□□□ 1.71
FGFR1-239ENST00000533619 VWDEQ8N2E2 1590 aa25.75■■□□□ 1.71
FGFR1-239ENST00000533619 LMTK3Q96Q04 1460 aa25.75■■□□□ 1.71
FGFR1-239ENST00000533619 NAIPQ13075 1403 aa25.75■■□□□ 1.71
FGFR1-239ENST00000533619 LMTK2Q8IWU2 1503 aa25.73■■□□□ 1.71
FGFR1-239ENST00000533619 HFM1A2PYH4 1435 aa25.73■■□□□ 1.71
FGFR1-239ENST00000533619 ARHGAP31Q2M1Z3 1444 aa25.73■■□□□ 1.71
FGFR1-239ENST00000533619 FBXO31Q5XUX0 539 aaPredicted RBP25.73■■□□□ 1.71
FGFR1-239ENST00000533619 GCC2Q8IWJ2 1684 aa25.73■■□□□ 1.71
FGFR1-239ENST00000533619 UNC13BO14795 1591 aa25.73■■□□□ 1.71
FGFR1-239ENST00000533619 CFAP65Q6ZU64 1925 aaKnown RBP25.69■■□□□ 1.7
FGFR1-239ENST00000533619 TNRQ92752 1358 aa25.69■■□□□ 1.7
FGFR1-239ENST00000533619 NUP155O75694 1391 aa25.68■■□□□ 1.7
FGFR1-239ENST00000533619 SPATA31D1Q6ZQQ2 1576 aa25.65■■□□□ 1.7
FGFR1-239ENST00000533619 IQGAP3Q86VI3 1631 aa25.64■■□□□ 1.7
FGFR1-239ENST00000533619 MYO3AQ8NEV4 1616 aa25.64■■□□□ 1.7
FGFR1-239ENST00000533619 HSPA2P54652 639 aa25.64■■□□□ 1.7
FGFR1-239ENST00000533619 ERVK-7P63135 1459 aa25.64■■□□□ 1.69
FGFR1-239ENST00000533619 TET3O43151 1660 aa25.64■■□□□ 1.69
FGFR1-239ENST00000533619 EFCAB6Q5THR3 1501 aa25.63■■□□□ 1.69
FGFR1-239ENST00000533619 ACIN1Q9UKV3 1341 aaKnown RBP25.63■■□□□ 1.69
FGFR1-239ENST00000533619 RPRD2Q5VT52 1461 aaKnown RBP25.61■■□□□ 1.69
FGFR1-239ENST00000533619 NLRP1Q9C000 1473 aa25.61■■□□□ 1.69
FGFR1-239ENST00000533619 ZNF142P52746 1687 aaPredicted RBP25.6■■□□□ 1.69
FGFR1-239ENST00000533619 CEP170BQ9Y4F5 1589 aaPredicted RBP25.6■■□□□ 1.69
FGFR1-239ENST00000533619 A2ML1A8K2U0 1454 aa25.6■■□□□ 1.69
FGFR1-239ENST00000533619 TRIM52Q96A61 297 aa25.58■■□□□ 1.69
FGFR1-239ENST00000533619 SETD5Q9C0A6 1442 aa25.55■■□□□ 1.68
FGFR1-239ENST00000533619 THEMISQ8N1K5 641 aaPredicted RBP25.54■■□□□ 1.68
FGFR1-239ENST00000533619 NOS1P29475 1434 aa25.54■■□□□ 1.68
FGFR1-239ENST00000533619 SLC52A1Q9NWF4 448 aa25.52■■□□□ 1.68
FGFR1-239ENST00000533619 E9PCH4 1651 aa25.52■■□□□ 1.68
FGFR1-239ENST00000533619 DMRT2Q9Y5R5 561 aa25.51■■□□□ 1.67
FGFR1-239ENST00000533619 UGGT1Q9NYU2 1555 aa25.5■■□□□ 1.67
FGFR1-239ENST00000533619 PLA2R1Q13018 1463 aa25.47■■□□□ 1.67
FGFR1-239ENST00000533619 SLC4A1APQ9BWU0 796 aaKnown RBP25.47■■□□□ 1.67
FGFR1-239ENST00000533619 PKD2Q13563 968 aa25.46■■□□□ 1.67
FGFR1-239ENST00000533619 IDI1Q13907 227 aa25.46■■□□□ 1.67
FGFR1-239ENST00000533619 STAG3Q9UJ98 1225 aa25.46■■□□□ 1.67
FGFR1-239ENST00000533619 SYNMO15061 1565 aa25.46■■□□□ 1.67
FGFR1-239ENST00000533619 STRCQ7RTU9 1775 aa25.45■■□□□ 1.66
FGFR1-239ENST00000533619 HRCP23327 699 aa25.44■■□□□ 1.66
FGFR1-239ENST00000533619 RAB3GAP2Q9H2M9 1393 aa25.44■■□□□ 1.66
FGFR1-239ENST00000533619 UBR1Q8IWV7 1749 aa25.43■■□□□ 1.66
FGFR1-239ENST00000533619 KDM5AP29375 1690 aaKnown RBP25.42■■□□□ 1.66
FGFR1-239ENST00000533619 PIK3C2BO00750 1634 aa25.41■■□□□ 1.66
FGFR1-239ENST00000533619 ANKLE2Q86XL3 938 aa25.41■■□□□ 1.66
FGFR1-239ENST00000533619 MPHOSPH9Q99550 1183 aa25.4■■□□□ 1.66
FGFR1-239ENST00000533619 NCKAP5LQ9HCH0 1330 aa25.38■■□□□ 1.65
FGFR1-239ENST00000533619 PTPRTO14522 1441 aa25.38■■□□□ 1.65
FGFR1-239ENST00000533619 SPHKAPQ2M3C7 1700 aa25.38■■□□□ 1.65
FGFR1-239ENST00000533619 TRIM26Q12899 539 aaPredicted RBP25.36■■□□□ 1.65
FGFR1-239ENST00000533619 POLR1AO95602 1720 aaPredicted RBP25.34■■□□□ 1.65
FGFR1-239ENST00000533619 ADGRB3O60242 1522 aa25.33■■□□□ 1.65
FGFR1-239ENST00000533619 EID1Q9Y6B2 187 aa25.33■■□□□ 1.65
FGFR1-239ENST00000533619 SLIT1O75093 1534 aa25.32■■□□□ 1.64
FGFR1-239ENST00000533619 TMEM2Q9UHN6 1383 aa25.31■■□□□ 1.64
FGFR1-239ENST00000533619 CHGAP10645 457 aaKnown RBP25.31■■□□□ 1.64
FGFR1-239ENST00000533619 HDGFP51858 240 aaKnown RBP25.31■■□□□ 1.64
FGFR1-239ENST00000533619 ARHGAP23Q9P227 1491 aa25.31■■□□□ 1.64
FGFR1-239ENST00000533619 TXNDC2Q86VQ3 553 aa25.3■■□□□ 1.64
FGFR1-239ENST00000533619 TRPM2O94759 1503 aa25.3■■□□□ 1.64
FGFR1-239ENST00000533619 TMEM131LA2VDJ0 1609 aa25.29■■□□□ 1.64
FGFR1-239ENST00000533619 MED14O60244 1454 aa25.28■■□□□ 1.64
FGFR1-239ENST00000533619 MYO5BQ9ULV0 1848 aa25.26■■□□□ 1.63
FGFR1-239ENST00000533619 SCAF11Q99590 1463 aaKnown RBP25.26■■□□□ 1.63
FGFR1-239ENST00000533619 LTKP29376 864 aa25.25■■□□□ 1.63
FGFR1-239ENST00000533619 FOXD1Q16676 465 aa25.25■■□□□ 1.63
FGFR1-239ENST00000533619 NPHP4O75161 1426 aaPredicted RBP25.25■■□□□ 1.63
FGFR1-239ENST00000533619 NEURL4Q96JN8 1562 aa25.25■■□□□ 1.63
FGFR1-239ENST00000533619 KIF1BO60333 1816 aa25.23■■□□□ 1.63
FGFR1-239ENST00000533619 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.23■■□□□ 1.63
FGFR1-239ENST00000533619 CLTCL1P53675 1640 aa25.23■■□□□ 1.63
FGFR1-239ENST00000533619 RIMS2Q9UQ26 1411 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms