RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 RIMS1Q86UR5 1692 aaKnown RBP22.04■■□□□ 1.12
SF3B2-214ENST00000533595 RNF17Q9BXT8 1623 aaKnown RBP22.02■■□□□ 1.12
SF3B2-214ENST00000533595 PTPRMP28827 1452 aa22.01■■□□□ 1.11
SF3B2-214ENST00000533595 CNTLNQ9NXG0 1405 aa22■■□□□ 1.11
SF3B2-214ENST00000533595 WASHC2CQ9Y4E1 1318 aa21.97■■□□□ 1.11
SF3B2-214ENST00000533595 FAM135AQ9P2D6 1515 aa21.96■■□□□ 1.11
SF3B2-214ENST00000533595 MROH1Q8NDA8 1641 aa21.96■■□□□ 1.11
SF3B2-214ENST00000533595 HFM1A2PYH4 1435 aa21.96■■□□□ 1.11
SF3B2-214ENST00000533595 NAIPQ13075 1403 aa21.96■■□□□ 1.11
SF3B2-214ENST00000533595 DEPDC5O75140 1603 aa21.95■■□□□ 1.1
SF3B2-214ENST00000533595 CLTCQ00610 1675 aaKnown RBP21.95■■□□□ 1.1
SF3B2-214ENST00000533595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.95■■□□□ 1.17e-14■■■□□ 14.6
SF3B2-214ENST00000533595 KDM5DQ9BY66 1539 aa21.95■■□□□ 1.1
SF3B2-214ENST00000533595 PRDM15P57071 1507 aaPredicted RBP21.94■■□□□ 1.1
SF3B2-214ENST00000533595 MROH2AA6NES4 1674 aa21.94■■□□□ 1.1
SF3B2-214ENST00000533595 KANK1Q14678 1352 aa21.93■■□□□ 1.1
SF3B2-214ENST00000533595 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
SF3B2-214ENST00000533595 GCC2Q8IWJ2 1684 aa21.93■■□□□ 1.1
SF3B2-214ENST00000533595 ZMYM3Q14202 1370 aa21.92■■□□□ 1.1
SF3B2-214ENST00000533595 CEBPAP49715 358 aaPredicted RBP21.91■■□□□ 1.1
SF3B2-214ENST00000533595 ABCC3O15438 1527 aa21.9■■□□□ 1.1
SF3B2-214ENST00000533595 ZC3H13Q5T200 1668 aaKnown RBP21.9■■□□□ 1.1
SF3B2-214ENST00000533595 C3P01024 1663 aa21.89■■□□□ 1.1
SF3B2-214ENST00000533595 UNC13BO14795 1591 aa21.88■■□□□ 1.09
SF3B2-214ENST00000533595 VWDEQ8N2E2 1590 aa21.87■■□□□ 1.09
SF3B2-214ENST00000533595 CEP152O94986 1710 aa21.86■■□□□ 1.09
SF3B2-214ENST00000533595 LMTK2Q8IWU2 1503 aa21.83■■□□□ 1.09
SF3B2-214ENST00000533595 NUP155O75694 1391 aa21.83■■□□□ 1.08
SF3B2-214ENST00000533595 CAMSAP1Q5T5Y3 1602 aa21.83■■□□□ 1.08
SF3B2-214ENST00000533595 PZPP20742 1482 aa21.82■■□□□ 1.08
SF3B2-214ENST00000533595 NPATQ14207 1427 aa21.81■■□□□ 1.08
SF3B2-214ENST00000533595 SETD5Q9C0A6 1442 aa21.81■■□□□ 1.08
SF3B2-214ENST00000533595 ARHGAP31Q2M1Z3 1444 aa21.8■■□□□ 1.08
SF3B2-214ENST00000533595 SETD1BQ9UPS6 1966 aaKnown RBP21.79■■□□□ 1.08
SF3B2-214ENST00000533595 IQGAP3Q86VI3 1631 aa21.79■■□□□ 1.08
SF3B2-214ENST00000533595 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
SF3B2-214ENST00000533595 FBXO31Q5XUX0 539 aaPredicted RBP21.78■■□□□ 1.08
SF3B2-214ENST00000533595 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
SF3B2-214ENST00000533595 EFCAB6Q5THR3 1501 aa21.76■■□□□ 1.07
SF3B2-214ENST00000533595 TET3O43151 1660 aa21.76■■□□□ 1.07
SF3B2-214ENST00000533595 RAB3GAP2Q9H2M9 1393 aa21.74■■□□□ 1.07
SF3B2-214ENST00000533595 ACIN1Q9UKV3 1341 aaKnown RBP21.74■■□□□ 1.07
SF3B2-214ENST00000533595 CFAP65Q6ZU64 1925 aaKnown RBP21.73■■□□□ 1.07
SF3B2-214ENST00000533595 ERVK-7P63135 1459 aa21.73■■□□□ 1.07
SF3B2-214ENST00000533595 TNRQ92752 1358 aa21.73■■□□□ 1.07
SF3B2-214ENST00000533595 PREX1Q8TCU6 1659 aa21.72■■□□□ 1.07
SF3B2-214ENST00000533595 UHRF1BP1Q6BDS2 1440 aa21.72■■□□□ 1.07
SF3B2-214ENST00000533595 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
SF3B2-214ENST00000533595 SPATA31D1Q6ZQQ2 1576 aa21.71■■□□□ 1.07
SF3B2-214ENST00000533595 ILDR1Q86SU0 546 aaPredicted RBP21.69■■□□□ 1.06
SF3B2-214ENST00000533595 LMTK3Q96Q04 1460 aa21.69■■□□□ 1.06
SF3B2-214ENST00000533595 E9PCH4 1651 aa21.68■■□□□ 1.06
SF3B2-214ENST00000533595 MYO3AQ8NEV4 1616 aa21.67■■□□□ 1.06
SF3B2-214ENST00000533595 HRCP23327 699 aa21.67■■□□□ 1.06
SF3B2-214ENST00000533595 SLC4A1APQ9BWU0 796 aaKnown RBP21.67■■□□□ 1.06
SF3B2-214ENST00000533595 NOS1P29475 1434 aa21.65■■□□□ 1.06
SF3B2-214ENST00000533595 NLRP1Q9C000 1473 aa21.64■■□□□ 1.06
SF3B2-214ENST00000533595 PKD2Q13563 968 aa21.63■■□□□ 1.05
SF3B2-214ENST00000533595 CEP170BQ9Y4F5 1589 aaPredicted RBP21.62■■□□□ 1.05
SF3B2-214ENST00000533595 MPHOSPH9Q99550 1183 aa21.62■■□□□ 1.05
SF3B2-214ENST00000533595 A2ML1A8K2U0 1454 aa21.62■■□□□ 1.05
SF3B2-214ENST00000533595 ZNF142P52746 1687 aaPredicted RBP21.62■■□□□ 1.05
SF3B2-214ENST00000533595 SYNMO15061 1565 aa21.61■■□□□ 1.05
SF3B2-214ENST00000533595 HSPA2P54652 639 aa21.61■■□□□ 1.05
SF3B2-214ENST00000533595 SLC52A1Q9NWF4 448 aa21.59■■□□□ 1.05
SF3B2-214ENST00000533595 IDI1Q13907 227 aa21.57■■□□□ 1.04
SF3B2-214ENST00000533595 PTPRTO14522 1441 aa21.56■■□□□ 1.04
SF3B2-214ENST00000533595 UGGT1Q9NYU2 1555 aa21.56■■□□□ 1.04
SF3B2-214ENST00000533595 SPHKAPQ2M3C7 1700 aa21.55■■□□□ 1.04
SF3B2-214ENST00000533595 FOXD1Q16676 465 aa21.54■■□□□ 1.04
SF3B2-214ENST00000533595 THEMISQ8N1K5 641 aaPredicted RBP21.53■■□□□ 1.04
SF3B2-214ENST00000533595 PIK3C2BO00750 1634 aa21.53■■□□□ 1.04
SF3B2-214ENST00000533595 STAG3Q9UJ98 1225 aa21.52■■□□□ 1.04
SF3B2-214ENST00000533595 TRPM2O94759 1503 aa21.51■■□□□ 1.03
SF3B2-214ENST00000533595 UBR1Q8IWV7 1749 aa21.51■■□□□ 1.03
SF3B2-214ENST00000533595 PLA2R1Q13018 1463 aa21.51■■□□□ 1.03
SF3B2-214ENST00000533595 PCGF6Q9BYE7 350 aa21.49■■□□□ 1.03
SF3B2-214ENST00000533595 KDM5AP29375 1690 aaKnown RBP21.49■■□□□ 1.03
SF3B2-214ENST00000533595 ADGRB3O60242 1522 aa21.48■■□□□ 1.03
SF3B2-214ENST00000533595 CHGAP10645 457 aaKnown RBP21.46■■□□□ 1.03
SF3B2-214ENST00000533595 CLTCL1P53675 1640 aa21.45■■□□□ 1.02
SF3B2-214ENST00000533595 TMEM131LA2VDJ0 1609 aa21.44■■□□□ 1.02
SF3B2-214ENST00000533595 STRCQ7RTU9 1775 aa21.43■■□□□ 1.02
SF3B2-214ENST00000533595 ANKLE2Q86XL3 938 aa21.43■■□□□ 1.02
SF3B2-214ENST00000533595 CCDC144AA2RUR9 1427 aa21.42■■□□□ 1.02
SF3B2-214ENST00000533595 SLIT1O75093 1534 aa21.42■■□□□ 1.02
SF3B2-214ENST00000533595 NCKAP5LQ9HCH0 1330 aa21.42■■□□□ 1.02
SF3B2-214ENST00000533595 TMEM2Q9UHN6 1383 aa21.42■■□□□ 1.02
SF3B2-214ENST00000533595 ARHGAP23Q9P227 1491 aa21.41■■□□□ 1.02
SF3B2-214ENST00000533595 MYO5BQ9ULV0 1848 aa21.41■■□□□ 1.02
SF3B2-214ENST00000533595 ANKRD30BQ9BXX2 1392 aa21.39■■□□□ 1.02
SF3B2-214ENST00000533595 DMRT2Q9Y5R5 561 aa21.39■■□□□ 1.01
SF3B2-214ENST00000533595 KIF1BO60333 1816 aa21.39■■□□□ 1.01
SF3B2-214ENST00000533595 TXNDC2Q86VQ3 553 aa21.38■■□□□ 1.01
SF3B2-214ENST00000533595 EID1Q9Y6B2 187 aa21.38■■□□□ 1.01
SF3B2-214ENST00000533595 POLR1AO95602 1720 aaPredicted RBP21.38■■□□□ 1.01
SF3B2-214ENST00000533595 LTKP29376 864 aa21.36■■□□□ 1.01
SF3B2-214ENST00000533595 ZNF326Q5BKZ1 582 aaKnown RBP21.36■■□□□ 1.01
SF3B2-214ENST00000533595 SCAF11Q99590 1463 aaKnown RBP21.36■■□□□ 1.01
SF3B2-214ENST00000533595 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms