RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 KIF15Q9NS87 1388 aa26.24■■□□□ 1.79
CTSB-229ENST00000533572 HSPA2P54652 639 aa26.23■■□□□ 1.79
CTSB-229ENST00000533572 FAM135AQ9P2D6 1515 aa26.22■■□□□ 1.79
CTSB-229ENST00000533572 ANKRD30AQ9BXX3 1397 aa26.21■■□□□ 1.79
CTSB-229ENST00000533572 EIF2AK4Q9P2K8 1649 aaKnown RBP26.21■■□□□ 1.79
CTSB-229ENST00000533572 KDM5DQ9BY66 1539 aa26.21■■□□□ 1.79
CTSB-229ENST00000533572 RRP7BPQ9NSQ0 103 aa26.21■■□□□ 1.79
CTSB-229ENST00000533572 CHIC2Q9UKJ5 165 aa26.21■■□□□ 1.79
CTSB-229ENST00000533572 NPATQ14207 1427 aa26.21■■□□□ 1.79
CTSB-229ENST00000533572 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.2■■□□□ 1.795e-7■□□□□ 10.8
CTSB-229ENST00000533572 WASHC2CQ9Y4E1 1318 aa26.2■■□□□ 1.79
CTSB-229ENST00000533572 FBXO41Q8TF61 875 aa26.2■■□□□ 1.78
CTSB-229ENST00000533572 RRBP1Q9P2E9 1410 aaKnown RBP26.19■■□□□ 1.78
CTSB-229ENST00000533572 RNF17Q9BXT8 1623 aaKnown RBP26.17■■□□□ 1.78
CTSB-229ENST00000533572 ERBINQ96RT1 1412 aa26.16■■□□□ 1.78
CTSB-229ENST00000533572 PTPRKQ15262 1439 aa26.14■■□□□ 1.77
CTSB-229ENST00000533572 NCOA1Q15788 1441 aa26.11■■□□□ 1.77
CTSB-229ENST00000533572 ADGRL2O95490 1459 aa26.11■■□□□ 1.77
CTSB-229ENST00000533572 ZC3H13Q5T200 1668 aaKnown RBP26.09■■□□□ 1.77
CTSB-229ENST00000533572 PZPP20742 1482 aa26.08■■□□□ 1.77
CTSB-229ENST00000533572 ABCC3O15438 1527 aa26.07■■□□□ 1.76
CTSB-229ENST00000533572 MROH1Q8NDA8 1641 aa26.06■■□□□ 1.76
CTSB-229ENST00000533572 KANK1Q14678 1352 aa26.06■■□□□ 1.76
CTSB-229ENST00000533572 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.05■■□□□ 1.76
CTSB-229ENST00000533572 MYO3AQ8NEV4 1616 aa26.05■■□□□ 1.76
CTSB-229ENST00000533572 TNRQ92752 1358 aa26.04■■□□□ 1.76
CTSB-229ENST00000533572 PRDM15P57071 1507 aaPredicted RBP26.04■■□□□ 1.76
CTSB-229ENST00000533572 ITGAEP38570 1179 aa26.03■■□□□ 1.76
CTSB-229ENST00000533572 FBXO31Q5XUX0 539 aaPredicted RBP26.02■■□□□ 1.76
CTSB-229ENST00000533572 CEP152O94986 1710 aa26.01■■□□□ 1.75
CTSB-229ENST00000533572 ZNF142P52746 1687 aaPredicted RBP26■■□□□ 1.75
CTSB-229ENST00000533572 CEP170BQ9Y4F5 1589 aaPredicted RBP26■■□□□ 1.75
CTSB-229ENST00000533572 ANKRD50Q9ULJ7 1429 aa26■■□□□ 1.75
CTSB-229ENST00000533572 DMRT2Q9Y5R5 561 aa25.99■■□□□ 1.75
CTSB-229ENST00000533572 DEPDC5O75140 1603 aa25.99■■□□□ 1.75
CTSB-229ENST00000533572 CAMSAP1Q5T5Y3 1602 aa25.98■■□□□ 1.75
CTSB-229ENST00000533572 ROCK1Q13464 1354 aa25.97■■□□□ 1.75
CTSB-229ENST00000533572 A2ML1A8K2U0 1454 aa25.96■■□□□ 1.75
CTSB-229ENST00000533572 STRCQ7RTU9 1775 aa25.93■■□□□ 1.74
CTSB-229ENST00000533572 ERVK-7P63135 1459 aa25.92■■□□□ 1.74
CTSB-229ENST00000533572 NLRP1Q9C000 1473 aa25.92■■□□□ 1.74
CTSB-229ENST00000533572 SPATA31D1Q6ZQQ2 1576 aa25.9■■□□□ 1.74
CTSB-229ENST00000533572 ARHGAP31Q2M1Z3 1444 aa25.9■■□□□ 1.74
CTSB-229ENST00000533572 TRIM26Q12899 539 aaPredicted RBP25.9■■□□□ 1.74
CTSB-229ENST00000533572 PLA2R1Q13018 1463 aa25.89■■□□□ 1.73
CTSB-229ENST00000533572 LMTK2Q8IWU2 1503 aa25.88■■□□□ 1.73
CTSB-229ENST00000533572 VWDEQ8N2E2 1590 aa25.87■■□□□ 1.73
CTSB-229ENST00000533572 CFAP65Q6ZU64 1925 aaKnown RBP25.87■■□□□ 1.73
CTSB-229ENST00000533572 PTPRTO14522 1441 aa25.87■■□□□ 1.73
CTSB-229ENST00000533572 PKD2Q13563 968 aa25.86■■□□□ 1.73
CTSB-229ENST00000533572 THEMISQ8N1K5 641 aaPredicted RBP25.84■■□□□ 1.73
CTSB-229ENST00000533572 UGGT1Q9NYU2 1555 aa25.84■■□□□ 1.73
CTSB-229ENST00000533572 NCKAP5LQ9HCH0 1330 aa25.84■■□□□ 1.73
CTSB-229ENST00000533572 EFCAB6Q5THR3 1501 aa25.82■■□□□ 1.72
CTSB-229ENST00000533572 UNC13BO14795 1591 aa25.82■■□□□ 1.72
CTSB-229ENST00000533572 ANKLE2Q86XL3 938 aa25.76■■□□□ 1.71
CTSB-229ENST00000533572 TET3O43151 1660 aa25.76■■□□□ 1.71
CTSB-229ENST00000533572 RPRD2Q5VT52 1461 aaKnown RBP25.74■■□□□ 1.71
CTSB-229ENST00000533572 NUP155O75694 1391 aa25.74■■□□□ 1.71
CTSB-229ENST00000533572 STAG3Q9UJ98 1225 aa25.74■■□□□ 1.71
CTSB-229ENST00000533572 CERKQ8TCT0 537 aa25.73■■□□□ 1.71
CTSB-229ENST00000533572 POLR1AO95602 1720 aaPredicted RBP25.73■■□□□ 1.71
CTSB-229ENST00000533572 HFM1A2PYH4 1435 aa25.72■■□□□ 1.71
CTSB-229ENST00000533572 GCC2Q8IWJ2 1684 aa25.72■■□□□ 1.71
CTSB-229ENST00000533572 IQGAP3Q86VI3 1631 aa25.71■■□□□ 1.71
CTSB-229ENST00000533572 NOS1P29475 1434 aa25.71■■□□□ 1.71
CTSB-229ENST00000533572 ACIN1Q9UKV3 1341 aaKnown RBP25.7■■□□□ 1.71
CTSB-229ENST00000533572 UBR1Q8IWV7 1749 aa25.69■■□□□ 1.7
CTSB-229ENST00000533572 NAIPQ13075 1403 aa25.69■■□□□ 1.7
CTSB-229ENST00000533572 SYNMO15061 1565 aa25.68■■□□□ 1.7
CTSB-229ENST00000533572 PIK3C2BO00750 1634 aa25.67■■□□□ 1.7
CTSB-229ENST00000533572 SLC52A1Q9NWF4 448 aa25.66■■□□□ 1.7
CTSB-229ENST00000533572 NEURL4Q96JN8 1562 aa25.65■■□□□ 1.7
CTSB-229ENST00000533572 IDI1Q13907 227 aa25.65■■□□□ 1.7
CTSB-229ENST00000533572 NPHP4O75161 1426 aaPredicted RBP25.64■■□□□ 1.7
CTSB-229ENST00000533572 EID1Q9Y6B2 187 aa25.63■■□□□ 1.69
CTSB-229ENST00000533572 E9PCH4 1651 aa25.62■■□□□ 1.69
CTSB-229ENST00000533572 SETD5Q9C0A6 1442 aa25.62■■□□□ 1.69
CTSB-229ENST00000533572 ZNF335Q9H4Z2 1342 aaPredicted RBP25.62■■□□□ 1.69
CTSB-229ENST00000533572 MED14O60244 1454 aa25.6■■□□□ 1.69
CTSB-229ENST00000533572 SCAF11Q99590 1463 aaKnown RBP25.6■■□□□ 1.69
CTSB-229ENST00000533572 ADGRB3O60242 1522 aa25.6■■□□□ 1.69
CTSB-229ENST00000533572 SLIT1O75093 1534 aa25.6■■□□□ 1.69
CTSB-229ENST00000533572 KDM5AP29375 1690 aaKnown RBP25.6■■□□□ 1.69
CTSB-229ENST00000533572 TXNDC2Q86VQ3 553 aa25.59■■□□□ 1.69
CTSB-229ENST00000533572 TRIM52Q96A61 297 aa25.59■■□□□ 1.69
CTSB-229ENST00000533572 ARHGAP23Q9P227 1491 aa25.59■■□□□ 1.69
CTSB-229ENST00000533572 TMEM2Q9UHN6 1383 aa25.58■■□□□ 1.69
CTSB-229ENST00000533572 HRCP23327 699 aa25.58■■□□□ 1.69
CTSB-229ENST00000533572 LTBP4Q8N2S1 1624 aa25.58■■□□□ 1.69
CTSB-229ENST00000533572 IQGAP1P46940 1657 aa25.58■■□□□ 1.68
CTSB-229ENST00000533572 CHGAP10645 457 aaKnown RBP25.55■■□□□ 1.68
CTSB-229ENST00000533572 LTKP29376 864 aa25.53■■□□□ 1.68
CTSB-229ENST00000533572 PCGF6Q9BYE7 350 aa25.53■■□□□ 1.68
CTSB-229ENST00000533572 IQSEC2Q5JU85 1478 aa25.5■■□□□ 1.67
CTSB-229ENST00000533572 RAB3GAP2Q9H2M9 1393 aa25.5■■□□□ 1.67
CTSB-229ENST00000533572 HDGFP51858 240 aaKnown RBP25.48■■□□□ 1.67
CTSB-229ENST00000533572 SPHKAPQ2M3C7 1700 aa25.48■■□□□ 1.67
CTSB-229ENST00000533572 PPP1R15AO75807 674 aaPredicted RBP25.47■■□□□ 1.67
CTSB-229ENST00000533572 SLC4A1APQ9BWU0 796 aaKnown RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms