RNA–Protein interactions for RNA: ENST00000531951.5

PUF60-217, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 973 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-217ENST00000531951 PRDM15P57071 1507 aaPredicted RBP28.14■■■□□ 2.1
PUF60-217ENST00000531951 HRCP23327 699 aa28.14■■■□□ 2.1
PUF60-217ENST00000531951 KIF3BO15066 747 aa28.11■■■□□ 2.09
PUF60-217ENST00000531951 IQGAP3Q86VI3 1631 aa28.1■■■□□ 2.09
PUF60-217ENST00000531951 KDM5DQ9BY66 1539 aa28.1■■■□□ 2.09
PUF60-217ENST00000531951 ACIN1Q9UKV3 1341 aaKnown RBP28.1■■■□□ 2.09
PUF60-217ENST00000531951 VWDEQ8N2E2 1590 aa28.07■■■□□ 2.08
PUF60-217ENST00000531951 CEP152O94986 1710 aa28.07■■■□□ 2.08
PUF60-217ENST00000531951 ZC3H13Q5T200 1668 aaKnown RBP28.07■■■□□ 2.08
PUF60-217ENST00000531951 FAM135AQ9P2D6 1515 aa28.02■■■□□ 2.08
PUF60-217ENST00000531951 ARID4BQ4LE39 1312 aaPredicted RBP28.01■■■□□ 2.07
PUF60-217ENST00000531951 NUP155O75694 1391 aa28■■■□□ 2.07
PUF60-217ENST00000531951 TRIM52Q96A61 297 aa28■■■□□ 2.07
PUF60-217ENST00000531951 FER1L4A9Z1Z3 1794 aa28■■■□□ 2.07
PUF60-217ENST00000531951 PZPP20742 1482 aa28■■■□□ 2.07
PUF60-217ENST00000531951 TET3O43151 1660 aa28■■■□□ 2.07
PUF60-217ENST00000531951 GGT6Q6P531 493 aa27.99■■■□□ 2.07
PUF60-217ENST00000531951 KANK1Q14678 1352 aa27.99■■■□□ 2.07
PUF60-217ENST00000531951 CLTCQ00610 1675 aaKnown RBP27.98■■■□□ 2.07
PUF60-217ENST00000531951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.98■■■□□ 2.077e-7■□□□□ 9.1
PUF60-217ENST00000531951 ABCC3O15438 1527 aa27.97■■■□□ 2.07
PUF60-217ENST00000531951 LMTK2Q8IWU2 1503 aa27.97■■■□□ 2.07
PUF60-217ENST00000531951 CAMSAP1Q5T5Y3 1602 aa27.96■■■□□ 2.07
PUF60-217ENST00000531951 ADAMTSL3P82987 1691 aa27.94■■■□□ 2.06
PUF60-217ENST00000531951 PPP6R1Q9UPN7 881 aa27.93■■■□□ 2.06
PUF60-217ENST00000531951 MROH2AA6NES4 1674 aa27.93■■■□□ 2.06
PUF60-217ENST00000531951 E9PCH4 1651 aa27.92■■■□□ 2.06
PUF60-217ENST00000531951 EFCAB6Q5THR3 1501 aa27.92■■■□□ 2.06
PUF60-217ENST00000531951 MLECQ14165 292 aa27.91■■■□□ 2.06
PUF60-217ENST00000531951 CFAP65Q6ZU64 1925 aaKnown RBP27.89■■■□□ 2.06
PUF60-217ENST00000531951 MADDQ8WXG6 1647 aa27.89■■■□□ 2.05
PUF60-217ENST00000531951 WASHC2CQ9Y4E1 1318 aa27.88■■■□□ 2.05
PUF60-217ENST00000531951 DHX57Q6P158 1386 aaKnown RBP27.87■■■□□ 2.05
PUF60-217ENST00000531951 MPHOSPH9Q99550 1183 aa27.87■■■□□ 2.05
PUF60-217ENST00000531951 SLC4A1APQ9BWU0 796 aaKnown RBP27.86■■■□□ 2.05
PUF60-217ENST00000531951 RIMS1Q86UR5 1692 aaKnown RBP27.85■■■□□ 2.05
PUF60-217ENST00000531951 CNTLNQ9NXG0 1405 aa27.84■■■□□ 2.05
PUF60-217ENST00000531951 SPHKAPQ2M3C7 1700 aa27.82■■■□□ 2.04
PUF60-217ENST00000531951 C3P01024 1663 aa27.81■■■□□ 2.04
PUF60-217ENST00000531951 ARHGAP31Q2M1Z3 1444 aa27.8■■■□□ 2.04
PUF60-217ENST00000531951 RPRD2Q5VT52 1461 aaKnown RBP27.8■■■□□ 2.04
PUF60-217ENST00000531951 PREX1Q8TCU6 1659 aa27.79■■■□□ 2.04
PUF60-217ENST00000531951 ESF1Q9H501 851 aaKnown RBP27.79■■■□□ 2.04
PUF60-217ENST00000531951 PKD2Q13563 968 aa27.78■■■□□ 2.04
PUF60-217ENST00000531951 NPATQ14207 1427 aa27.77■■■□□ 2.04
PUF60-217ENST00000531951 ZMYM3Q14202 1370 aa27.72■■■□□ 2.03
PUF60-217ENST00000531951 FOXD1Q16676 465 aa27.71■■■□□ 2.03
PUF60-217ENST00000531951 PTPRTO14522 1441 aa27.68■■■□□ 2.02
PUF60-217ENST00000531951 TRPM2O94759 1503 aa27.68■■■□□ 2.02
PUF60-217ENST00000531951 SPATA31D1Q6ZQQ2 1576 aa27.68■■■□□ 2.02
PUF60-217ENST00000531951 CCER1Q8TC90 406 aaPredicted RBP27.67■■■□□ 2.02
PUF60-217ENST00000531951 ANKRD30BQ9BXX2 1392 aa27.67■■■□□ 2.02
PUF60-217ENST00000531951 ERVK-7P63135 1459 aa27.67■■■□□ 2.02
PUF60-217ENST00000531951 SYNMO15061 1565 aa27.66■■■□□ 2.02
PUF60-217ENST00000531951 NOS1P29475 1434 aa27.66■■■□□ 2.02
PUF60-217ENST00000531951 PLA2R1Q13018 1463 aa27.65■■■□□ 2.02
PUF60-217ENST00000531951 CLSPNQ9HAW4 1339 aa27.64■■■□□ 2.01
PUF60-217ENST00000531951 PIK3C2BO00750 1634 aa27.63■■■□□ 2.01
PUF60-217ENST00000531951 CLTCL1P53675 1640 aa27.63■■■□□ 2.01
PUF60-217ENST00000531951 PTPRMP28827 1452 aa27.62■■■□□ 2.01
PUF60-217ENST00000531951 KIF1BO60333 1816 aa27.61■■■□□ 2.01
PUF60-217ENST00000531951 SETD1BQ9UPS6 1966 aaKnown RBP27.6■■■□□ 2.01
PUF60-217ENST00000531951 FBXO31Q5XUX0 539 aaPredicted RBP27.58■■■□□ 2.01
PUF60-217ENST00000531951 UGGT1Q9NYU2 1555 aa27.57■■■□□ 2
PUF60-217ENST00000531951 KDM4FA0A1W2PPD8 638 aa27.57■■■□□ 2
PUF60-217ENST00000531951 CEBPAP49715 358 aaPredicted RBP27.56■■■□□ 2
PUF60-217ENST00000531951 CCDC144AA2RUR9 1427 aa27.55■■■□□ 2
PUF60-217ENST00000531951 MYO5BQ9ULV0 1848 aa27.54■■■□□ 2
PUF60-217ENST00000531951 MYO3AQ8NEV4 1616 aa27.52■■■□□ 2
PUF60-217ENST00000531951 TNRQ92752 1358 aa27.52■■■□□ 2
PUF60-217ENST00000531951 KDM5AP29375 1690 aaKnown RBP27.49■■□□□ 1.99
PUF60-217ENST00000531951 NEURL4Q96JN8 1562 aa27.48■■□□□ 1.99
PUF60-217ENST00000531951 ZNF142P52746 1687 aaPredicted RBP27.47■■□□□ 1.99
PUF60-217ENST00000531951 PLPPR3Q6T4P5 718 aa27.47■■□□□ 1.99
PUF60-217ENST00000531951 SIN3AQ96ST3 1273 aa27.47■■□□□ 1.99
PUF60-217ENST00000531951 SLC52A1Q9NWF4 448 aa27.47■■□□□ 1.99
PUF60-217ENST00000531951 NLRP1Q9C000 1473 aa27.46■■□□□ 1.99
PUF60-217ENST00000531951 TMEM131LA2VDJ0 1609 aa27.45■■□□□ 1.99
PUF60-217ENST00000531951 UBR1Q8IWV7 1749 aa27.45■■□□□ 1.99
PUF60-217ENST00000531951 ADGRB3O60242 1522 aa27.45■■□□□ 1.98
PUF60-217ENST00000531951 IDI1Q13907 227 aa27.42■■□□□ 1.98
PUF60-217ENST00000531951 NEUROD1Q13562 356 aa27.41■■□□□ 1.98
PUF60-217ENST00000531951 SPATA31E1Q6ZUB1 1445 aa27.41■■□□□ 1.98
PUF60-217ENST00000531951 CEP170BQ9Y4F5 1589 aaPredicted RBP27.4■■□□□ 1.98
PUF60-217ENST00000531951 IFT172Q9UG01 1749 aa27.4■■□□□ 1.98
PUF60-217ENST00000531951 A2ML1A8K2U0 1454 aa27.38■■□□□ 1.97
PUF60-217ENST00000531951 PPLO60437 1756 aa27.37■■□□□ 1.97
PUF60-217ENST00000531951 UHRF1BP1Q6BDS2 1440 aa27.32■■□□□ 1.96
PUF60-217ENST00000531951 TONSLQ96HA7 1378 aa27.31■■□□□ 1.96
PUF60-217ENST00000531951 CHGAP10645 457 aaKnown RBP27.3■■□□□ 1.96
PUF60-217ENST00000531951 NEXMIFQ5QGS0 1516 aa27.28■■□□□ 1.96
PUF60-217ENST00000531951 STAG3Q9UJ98 1225 aa27.28■■□□□ 1.96
PUF60-217ENST00000531951 TIMELESSQ9UNS1 1208 aa27.28■■□□□ 1.96
PUF60-217ENST00000531951 RGL3Q3MIN7 710 aa27.26■■□□□ 1.95
PUF60-217ENST00000531951 SLIT1O75093 1534 aa27.23■■□□□ 1.95
PUF60-217ENST00000531951 ZNF326Q5BKZ1 582 aaKnown RBP27.23■■□□□ 1.95
PUF60-217ENST00000531951 L3MBTL2Q969R5 705 aa27.23■■□□□ 1.95
PUF60-217ENST00000531951 RPGRIP1LQ68CZ1 1315 aa27.21■■□□□ 1.95
PUF60-217ENST00000531951 ARHGAP23Q9P227 1491 aa27.21■■□□□ 1.95
PUF60-217ENST00000531951 MYOM2P54296 1465 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms