RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 EFCAB3Q8N7B9 438 aa7.34□□□□□ -1.23
AC055878.1-201ENST00000531858 HCSTQ9UBK5 93 aa7.34□□□□□ -1.23
AC055878.1-201ENST00000531858 NCKAP5LQ9HCH0 1330 aa7.33□□□□□ -1.24
AC055878.1-201ENST00000531858 PPP1R37O75864 691 aa7.33□□□□□ -1.24
AC055878.1-201ENST00000531858 PBX2P40425 430 aa7.33□□□□□ -1.24
AC055878.1-201ENST00000531858 DDX27Q96GQ7 796 aaKnown RBP7.33□□□□□ -1.24
AC055878.1-201ENST00000531858 LARP6Q9BRS8 491 aaKnown RBP7.33□□□□□ -1.24
AC055878.1-201ENST00000531858 CRISPLD2Q9H0B8 497 aa7.32□□□□□ -1.24
AC055878.1-201ENST00000531858 RBM26Q5T8P6 1007 aaKnown RBP7.31□□□□□ -1.24
AC055878.1-201ENST00000531858 TRAIPQ9BWF2 469 aa7.31□□□□□ -1.24
AC055878.1-201ENST00000531858 ARID3CA6NKF2 412 aa7.3□□□□□ -1.24
AC055878.1-201ENST00000531858 TRAK2O60296 914 aa7.3□□□□□ -1.24
AC055878.1-201ENST00000531858 ONECUT3O60422 494 aaPredicted RBP7.3□□□□□ -1.24
AC055878.1-201ENST00000531858 MINK1Q8N4C8 1332 aaPredicted RBP7.29□□□□□ -1.24
AC055878.1-201ENST00000531858 FAM117AQ9C073 453 aa7.29□□□□□ -1.24
AC055878.1-201ENST00000531858 SPDYE16A6NNV3 312 aaPredicted RBP7.28□□□□□ -1.24
AC055878.1-201ENST00000531858 AMHR2Q16671 573 aa7.28□□□□□ -1.24
AC055878.1-201ENST00000531858 NECTIN2Q92692 538 aa7.28□□□□□ -1.24
AC055878.1-201ENST00000531858 CCDC82Q8N4S0 544 aa7.27□□□□□ -1.25
AC055878.1-201ENST00000531858 KHSRPQ92945 711 aaKnown RBP eCLIP7.27□□□□□ -1.25
AC055878.1-201ENST00000531858 PLEKHG3A1L390 1219 aa7.26□□□□□ -1.25
AC055878.1-201ENST00000531858 MLLT3P42568 568 aaPredicted RBP7.25□□□□□ -1.25
AC055878.1-201ENST00000531858 SERPINA10Q9UK55 444 aa7.25□□□□□ -1.25
AC055878.1-201ENST00000531858 PHF8Q9UPP1 1060 aa7.25□□□□□ -1.25
AC055878.1-201ENST00000531858 MAP2K5Q13163 448 aa7.24□□□□□ -1.25
AC055878.1-201ENST00000531858 PDIA6Q15084 440 aa7.22□□□□□ -1.25
AC055878.1-201ENST00000531858 PCMTD1Q96MG8 357 aaPredicted RBP7.22□□□□□ -1.25
AC055878.1-201ENST00000531858 AXIN2Q9Y2T1 843 aa7.22□□□□□ -1.25
AC055878.1-201ENST00000531858 GPR37O15354 613 aa7.21□□□□□ -1.26
AC055878.1-201ENST00000531858 NUDT7P0C024 238 aa7.21□□□□□ -1.26
AC055878.1-201ENST00000531858 ADGRD1Q6QNK2 874 aa7.21□□□□□ -1.26
AC055878.1-201ENST00000531858 MS4A4AQ96JQ5 239 aa7.21□□□□□ -1.26
AC055878.1-201ENST00000531858 IRF6O14896 467 aa7.2□□□□□ -1.26
AC055878.1-201ENST00000531858 PARP9Q8IXQ6 854 aa7.2□□□□□ -1.26
AC055878.1-201ENST00000531858 PDE4CQ08493 712 aa7.19□□□□□ -1.26
AC055878.1-201ENST00000531858 CCDC97Q96F63 343 aaPredicted RBP7.19□□□□□ -1.26
AC055878.1-201ENST00000531858 LHX6Q9UPM6 363 aa7.19□□□□□ -1.26
AC055878.1-201ENST00000531858 MCM6Q14566 821 aa7.18□□□□□ -1.26
AC055878.1-201ENST00000531858 POTEEQ6S8J3 1075 aa7.18□□□□□ -1.26
AC055878.1-201ENST00000531858 CCDC102AQ96A19 550 aa7.18□□□□□ -1.26
AC055878.1-201ENST00000531858 PATL2C9JE40 543 aaKnown RBP7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 ARHGAP33O14559 1287 aa7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 RAD21O60216 631 aa7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 RGS20O76081 388 aa7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 PPP1R15BQ5SWA1 713 aa7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 PROSER2Q86WR7 435 aaPredicted RBP7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 CLUAP1Q96AJ1 413 aa7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 IRX2Q9BZI1 471 aaPredicted RBP7.16□□□□□ -1.26
AC055878.1-201ENST00000531858 PSDA5PKW4 1024 aaPredicted RBP7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 TK2O00142 265 aa7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 GNPATO15228 680 aa7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 SH3D19Q5HYK7 790 aa7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 TMCO4Q5TGY1 634 aa7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 RGS22Q8NE09 1264 aa7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 GPHNQ9NQX3 736 aaPredicted RBP7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 HIC1Q14526 733 aa7.14□□□□□ -1.27
AC055878.1-201ENST00000531858 FNBP4Q8N3X1 1017 aaPredicted RBP7.14□□□□□ -1.27
AC055878.1-201ENST00000531858 PCDHGA4Q9Y5G9 962 aa7.14□□□□□ -1.27
AC055878.1-201ENST00000531858 KCTD12Q96CX2 325 aaKnown RBP7.13□□□□□ -1.27
AC055878.1-201ENST00000531858 STAC3Q96MF2 364 aa7.13□□□□□ -1.27
AC055878.1-201ENST00000531858 DPYSL4O14531 572 aa7.12□□□□□ -1.27
AC055878.1-201ENST00000531858 PPP1R15AO75807 674 aaPredicted RBP7.12□□□□□ -1.27
AC055878.1-201ENST00000531858 SLC34A2O95436 690 aa7.12□□□□□ -1.27
AC055878.1-201ENST00000531858 C2orf72A6NCS6 295 aa7.11□□□□□ -1.27
AC055878.1-201ENST00000531858 KIF3CO14782 793 aa7.11□□□□□ -1.27
AC055878.1-201ENST00000531858 HRO43593 1189 aa7.11□□□□□ -1.27
AC055878.1-201ENST00000531858 FCHSD2O94868 740 aa7.11□□□□□ -1.27
AC055878.1-201ENST00000531858 AEBP1Q8IUX7 1158 aa7.11□□□□□ -1.27
AC055878.1-201ENST00000531858 TTLL12Q14166 644 aaPredicted RBP7.1□□□□□ -1.27
AC055878.1-201ENST00000531858 ZNF777Q9ULD5 760 aaPredicted RBP7.1□□□□□ -1.27
AC055878.1-201ENST00000531858 NUTM2FA1L443 756 aa7.09□□□□□ -1.27
AC055878.1-201ENST00000531858 SKIV2LQ15477 1246 aaKnown RBP7.09□□□□□ -1.27
AC055878.1-201ENST00000531858 EMILIN3Q9NT22 766 aa7.09□□□□□ -1.27
AC055878.1-201ENST00000531858 SPDYE5A6NIY4 337 aa7.08□□□□□ -1.28
AC055878.1-201ENST00000531858 MFAP1P55081 439 aaKnown RBP7.08□□□□□ -1.28
AC055878.1-201ENST00000531858 IFFO2Q5TF58 517 aa7.08□□□□□ -1.28
AC055878.1-201ENST00000531858 GIGYF2Q6Y7W6 1299 aaKnown RBP7.08□□□□□ -1.28
AC055878.1-201ENST00000531858 DMRTA1Q5VZB9 504 aa7.07□□□□□ -1.28
AC055878.1-201ENST00000531858 SHROOM4Q9ULL8 1493 aa7.06□□□□□ -1.28
AC055878.1-201ENST00000531858 PSEN2P49810 448 aa7.06□□□□□ -1.28
AC055878.1-201ENST00000531858 BANK1Q8NDB2 785 aa7.06□□□□□ -1.28
AC055878.1-201ENST00000531858 TMC2Q8TDI7 906 aa7.06□□□□□ -1.28
AC055878.1-201ENST00000531858 MS4A1P11836 297 aa7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 PTPN5P54829 565 aa7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 RETREG2Q8NC44 543 aa7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 KCNH8Q96L42 1107 aa7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 GZF1Q9H116 711 aaPredicted RBP7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 MTMR7Q9Y216 660 aa7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 ACIN1Q9UKV3 1341 aaKnown RBP7.04□□□□□ -1.28
AC055878.1-201ENST00000531858 A0A0G2JS52 829 aa7.04□□□□□ -1.28
AC055878.1-201ENST00000531858 CLCN1P35523 988 aa7.04□□□□□ -1.28
AC055878.1-201ENST00000531858 FOXK1P85037 733 aa7.04□□□□□ -1.28
AC055878.1-201ENST00000531858 OXER1Q8TDS5 423 aa7.04□□□□□ -1.28
AC055878.1-201ENST00000531858 PPP4R3BQ5MIZ7 849 aa7.03□□□□□ -1.28
AC055878.1-201ENST00000531858 WWC1Q8IX03 1113 aa7.03□□□□□ -1.28
AC055878.1-201ENST00000531858 E9PSI1 815 aa7.02□□□□□ -1.29
AC055878.1-201ENST00000531858 HMGB1P09429 215 aaKnown RBP7.02□□□□□ -1.29
AC055878.1-201ENST00000531858 OSBPP22059 807 aa7.02□□□□□ -1.29
AC055878.1-201ENST00000531858 KCNA1Q09470 495 aa7.02□□□□□ -1.29
AC055878.1-201ENST00000531858 FBXW7Q969H0 707 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms