RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 EFCAB3Q8N7B9 438 aa7.34□□□□□ -1.23
AC055878.1-201ENST00000531858 HCSTQ9UBK5 93 aa7.34□□□□□ -1.23
AC055878.1-201ENST00000531858 NCKAP5LQ9HCH0 1330 aa7.33□□□□□ -1.24
AC055878.1-201ENST00000531858 PPP1R37O75864 691 aa7.33□□□□□ -1.24
AC055878.1-201ENST00000531858 PBX2P40425 430 aa7.33□□□□□ -1.24
AC055878.1-201ENST00000531858 DDX27Q96GQ7 796 aaKnown RBP7.33□□□□□ -1.24
AC055878.1-201ENST00000531858 LARP6Q9BRS8 491 aaKnown RBP7.33□□□□□ -1.24
AC055878.1-201ENST00000531858 CRISPLD2Q9H0B8 497 aa7.32□□□□□ -1.24
AC055878.1-201ENST00000531858 RBM26Q5T8P6 1007 aaKnown RBP7.31□□□□□ -1.24
AC055878.1-201ENST00000531858 TRAIPQ9BWF2 469 aa7.31□□□□□ -1.24
AC055878.1-201ENST00000531858 ARID3CA6NKF2 412 aa7.3□□□□□ -1.24
AC055878.1-201ENST00000531858 TRAK2O60296 914 aa7.3□□□□□ -1.24
AC055878.1-201ENST00000531858 ONECUT3O60422 494 aaPredicted RBP7.3□□□□□ -1.24
AC055878.1-201ENST00000531858 MINK1Q8N4C8 1332 aaPredicted RBP7.29□□□□□ -1.24
AC055878.1-201ENST00000531858 FAM117AQ9C073 453 aa7.29□□□□□ -1.24
AC055878.1-201ENST00000531858 SPDYE16A6NNV3 312 aaPredicted RBP7.28□□□□□ -1.24
AC055878.1-201ENST00000531858 AMHR2Q16671 573 aa7.28□□□□□ -1.24
AC055878.1-201ENST00000531858 NECTIN2Q92692 538 aa7.28□□□□□ -1.24
AC055878.1-201ENST00000531858 CCDC82Q8N4S0 544 aa7.27□□□□□ -1.25
AC055878.1-201ENST00000531858 KHSRPQ92945 711 aaKnown RBP eCLIP7.27□□□□□ -1.25
AC055878.1-201ENST00000531858 PLEKHG3A1L390 1219 aa7.26□□□□□ -1.25
AC055878.1-201ENST00000531858 MLLT3P42568 568 aaPredicted RBP7.25□□□□□ -1.25
AC055878.1-201ENST00000531858 SERPINA10Q9UK55 444 aa7.25□□□□□ -1.25
AC055878.1-201ENST00000531858 PHF8Q9UPP1 1060 aa7.25□□□□□ -1.25
AC055878.1-201ENST00000531858 MAP2K5Q13163 448 aa7.24□□□□□ -1.25
AC055878.1-201ENST00000531858 PDIA6Q15084 440 aa7.22□□□□□ -1.25
AC055878.1-201ENST00000531858 PCMTD1Q96MG8 357 aaPredicted RBP7.22□□□□□ -1.25
AC055878.1-201ENST00000531858 AXIN2Q9Y2T1 843 aa7.22□□□□□ -1.25
AC055878.1-201ENST00000531858 GPR37O15354 613 aa7.21□□□□□ -1.26
AC055878.1-201ENST00000531858 NUDT7P0C024 238 aa7.21□□□□□ -1.26
AC055878.1-201ENST00000531858 ADGRD1Q6QNK2 874 aa7.21□□□□□ -1.26
AC055878.1-201ENST00000531858 MS4A4AQ96JQ5 239 aa7.21□□□□□ -1.26
AC055878.1-201ENST00000531858 IRF6O14896 467 aa7.2□□□□□ -1.26
AC055878.1-201ENST00000531858 PARP9Q8IXQ6 854 aa7.2□□□□□ -1.26
AC055878.1-201ENST00000531858 PDE4CQ08493 712 aa7.19□□□□□ -1.26
AC055878.1-201ENST00000531858 CCDC97Q96F63 343 aaPredicted RBP7.19□□□□□ -1.26
AC055878.1-201ENST00000531858 LHX6Q9UPM6 363 aa7.19□□□□□ -1.26
AC055878.1-201ENST00000531858 MCM6Q14566 821 aa7.18□□□□□ -1.26
AC055878.1-201ENST00000531858 POTEEQ6S8J3 1075 aa7.18□□□□□ -1.26
AC055878.1-201ENST00000531858 CCDC102AQ96A19 550 aa7.18□□□□□ -1.26
AC055878.1-201ENST00000531858 PATL2C9JE40 543 aaKnown RBP7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 ARHGAP33O14559 1287 aa7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 RAD21O60216 631 aa7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 RGS20O76081 388 aa7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 PPP1R15BQ5SWA1 713 aa7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 PROSER2Q86WR7 435 aaPredicted RBP7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 CLUAP1Q96AJ1 413 aa7.17□□□□□ -1.26
AC055878.1-201ENST00000531858 IRX2Q9BZI1 471 aaPredicted RBP7.16□□□□□ -1.26
AC055878.1-201ENST00000531858 PSDA5PKW4 1024 aaPredicted RBP7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 TK2O00142 265 aa7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 GNPATO15228 680 aa7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 SH3D19Q5HYK7 790 aa7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 TMCO4Q5TGY1 634 aa7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 RGS22Q8NE09 1264 aa7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 GPHNQ9NQX3 736 aaPredicted RBP7.15□□□□□ -1.26
AC055878.1-201ENST00000531858 HIC1Q14526 733 aa7.14□□□□□ -1.27
AC055878.1-201ENST00000531858 FNBP4Q8N3X1 1017 aaPredicted RBP7.14□□□□□ -1.27
AC055878.1-201ENST00000531858 PCDHGA4Q9Y5G9 962 aa7.14□□□□□ -1.27
AC055878.1-201ENST00000531858 KCTD12Q96CX2 325 aaKnown RBP7.13□□□□□ -1.27
AC055878.1-201ENST00000531858 STAC3Q96MF2 364 aa7.13□□□□□ -1.27
AC055878.1-201ENST00000531858 DPYSL4O14531 572 aa7.12□□□□□ -1.27
AC055878.1-201ENST00000531858 PPP1R15AO75807 674 aaPredicted RBP7.12□□□□□ -1.27
AC055878.1-201ENST00000531858 SLC34A2O95436 690 aa7.12□□□□□ -1.27
AC055878.1-201ENST00000531858 C2orf72A6NCS6 295 aa7.11□□□□□ -1.27
AC055878.1-201ENST00000531858 KIF3CO14782 793 aa7.11□□□□□ -1.27
AC055878.1-201ENST00000531858 HRO43593 1189 aa7.11□□□□□ -1.27
AC055878.1-201ENST00000531858 FCHSD2O94868 740 aa7.11□□□□□ -1.27
AC055878.1-201ENST00000531858 AEBP1Q8IUX7 1158 aa7.11□□□□□ -1.27
AC055878.1-201ENST00000531858 TTLL12Q14166 644 aaPredicted RBP7.1□□□□□ -1.27
AC055878.1-201ENST00000531858 ZNF777Q9ULD5 760 aaPredicted RBP7.1□□□□□ -1.27
AC055878.1-201ENST00000531858 NUTM2FA1L443 756 aa7.09□□□□□ -1.27
AC055878.1-201ENST00000531858 SKIV2LQ15477 1246 aaKnown RBP7.09□□□□□ -1.27
AC055878.1-201ENST00000531858 EMILIN3Q9NT22 766 aa7.09□□□□□ -1.27
AC055878.1-201ENST00000531858 SPDYE5A6NIY4 337 aa7.08□□□□□ -1.28
AC055878.1-201ENST00000531858 MFAP1P55081 439 aaKnown RBP7.08□□□□□ -1.28
AC055878.1-201ENST00000531858 IFFO2Q5TF58 517 aa7.08□□□□□ -1.28
AC055878.1-201ENST00000531858 GIGYF2Q6Y7W6 1299 aaKnown RBP7.08□□□□□ -1.28
AC055878.1-201ENST00000531858 DMRTA1Q5VZB9 504 aa7.07□□□□□ -1.28
AC055878.1-201ENST00000531858 SHROOM4Q9ULL8 1493 aa7.06□□□□□ -1.28
AC055878.1-201ENST00000531858 PSEN2P49810 448 aa7.06□□□□□ -1.28
AC055878.1-201ENST00000531858 BANK1Q8NDB2 785 aa7.06□□□□□ -1.28
AC055878.1-201ENST00000531858 TMC2Q8TDI7 906 aa7.06□□□□□ -1.28
AC055878.1-201ENST00000531858 MS4A1P11836 297 aa7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 PTPN5P54829 565 aa7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 RETREG2Q8NC44 543 aa7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 KCNH8Q96L42 1107 aa7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 GZF1Q9H116 711 aaPredicted RBP7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 MTMR7Q9Y216 660 aa7.05□□□□□ -1.28
AC055878.1-201ENST00000531858 ACIN1Q9UKV3 1341 aaKnown RBP7.04□□□□□ -1.28
AC055878.1-201ENST00000531858 A0A0G2JS52 829 aa7.04□□□□□ -1.28
AC055878.1-201ENST00000531858 CLCN1P35523 988 aa7.04□□□□□ -1.28
AC055878.1-201ENST00000531858 FOXK1P85037 733 aa7.04□□□□□ -1.28
AC055878.1-201ENST00000531858 OXER1Q8TDS5 423 aa7.04□□□□□ -1.28
AC055878.1-201ENST00000531858 PPP4R3BQ5MIZ7 849 aa7.03□□□□□ -1.28
AC055878.1-201ENST00000531858 WWC1Q8IX03 1113 aa7.03□□□□□ -1.28
AC055878.1-201ENST00000531858 E9PSI1 815 aa7.02□□□□□ -1.29
AC055878.1-201ENST00000531858 HMGB1P09429 215 aaKnown RBP7.02□□□□□ -1.29
AC055878.1-201ENST00000531858 OSBPP22059 807 aa7.02□□□□□ -1.29
AC055878.1-201ENST00000531858 KCNA1Q09470 495 aa7.02□□□□□ -1.29
AC055878.1-201ENST00000531858 FBXW7Q969H0 707 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms