RNA–Protein interactions for RNA: ENST00000531590.1

LRFN4-203, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 3

Gene LRFN4, Length 274 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-203ENST00000531590 PPP6R1Q9UPN7 881 aa24.57■■□□□ 1.52
LRFN4-203ENST00000531590 PTPRMP28827 1452 aa24.56■■□□□ 1.52
LRFN4-203ENST00000531590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.55■■□□□ 1.52
LRFN4-203ENST00000531590 ESF1Q9H501 851 aaKnown RBP24.54■■□□□ 1.52
LRFN4-203ENST00000531590 PRDM15P57071 1507 aaPredicted RBP24.54■■□□□ 1.52
LRFN4-203ENST00000531590 CNTLNQ9NXG0 1405 aa24.53■■□□□ 1.52
LRFN4-203ENST00000531590 RIMS1Q86UR5 1692 aaKnown RBP24.53■■□□□ 1.52
LRFN4-203ENST00000531590 FER1L4A9Z1Z3 1794 aa24.53■■□□□ 1.52
LRFN4-203ENST00000531590 WASHC2CQ9Y4E1 1318 aa24.53■■□□□ 1.52
LRFN4-203ENST00000531590 DEPDC5O75140 1603 aa24.53■■□□□ 1.52
LRFN4-203ENST00000531590 KDM5DQ9BY66 1539 aa24.51■■□□□ 1.51
LRFN4-203ENST00000531590 GCC2Q8IWJ2 1684 aa24.51■■□□□ 1.51
LRFN4-203ENST00000531590 ABCC3O15438 1527 aa24.51■■□□□ 1.51
LRFN4-203ENST00000531590 CEBPAP49715 358 aaPredicted RBP24.5■■□□□ 1.51
LRFN4-203ENST00000531590 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
LRFN4-203ENST00000531590 FAM135AQ9P2D6 1515 aa24.5■■□□□ 1.51
LRFN4-203ENST00000531590 PLPPR3Q6T4P5 718 aa24.49■■□□□ 1.51
LRFN4-203ENST00000531590 ZMYM3Q14202 1370 aa24.49■■□□□ 1.51
LRFN4-203ENST00000531590 CLTCQ00610 1675 aaKnown RBP24.47■■□□□ 1.51
LRFN4-203ENST00000531590 VWDEQ8N2E2 1590 aa24.47■■□□□ 1.51
LRFN4-203ENST00000531590 TRIM26Q12899 539 aaPredicted RBP24.47■■□□□ 1.51
LRFN4-203ENST00000531590 UNC13BO14795 1591 aa24.46■■□□□ 1.51
LRFN4-203ENST00000531590 SETD5Q9C0A6 1442 aa24.46■■□□□ 1.51
LRFN4-203ENST00000531590 KANK1Q14678 1352 aa24.46■■□□□ 1.51
LRFN4-203ENST00000531590 NUP155O75694 1391 aa24.43■■□□□ 1.5
LRFN4-203ENST00000531590 LMTK2Q8IWU2 1503 aa24.43■■□□□ 1.5
LRFN4-203ENST00000531590 MROH2AA6NES4 1674 aa24.41■■□□□ 1.5
LRFN4-203ENST00000531590 RAB3GAP2Q9H2M9 1393 aa24.41■■□□□ 1.5
LRFN4-203ENST00000531590 ZC3H13Q5T200 1668 aaKnown RBP24.4■■□□□ 1.5
LRFN4-203ENST00000531590 C3P01024 1663 aa24.4■■□□□ 1.5
LRFN4-203ENST00000531590 PZPP20742 1482 aa24.38■■□□□ 1.49
LRFN4-203ENST00000531590 CEP152O94986 1710 aa24.38■■□□□ 1.49
LRFN4-203ENST00000531590 FBXO31Q5XUX0 539 aaPredicted RBP24.37■■□□□ 1.49
LRFN4-203ENST00000531590 NPATQ14207 1427 aa24.36■■□□□ 1.49
LRFN4-203ENST00000531590 ARHGAP31Q2M1Z3 1444 aa24.36■■□□□ 1.49
LRFN4-203ENST00000531590 CAMSAP1Q5T5Y3 1602 aa24.36■■□□□ 1.49
LRFN4-203ENST00000531590 TRIM52Q96A61 297 aa24.36■■□□□ 1.49
LRFN4-203ENST00000531590 IQGAP3Q86VI3 1631 aa24.35■■□□□ 1.49
LRFN4-203ENST00000531590 EFCAB6Q5THR3 1501 aa24.35■■□□□ 1.49
LRFN4-203ENST00000531590 ERVK-7P63135 1459 aa24.3■■□□□ 1.48
LRFN4-203ENST00000531590 TET3O43151 1660 aa24.29■■□□□ 1.48
LRFN4-203ENST00000531590 SPATA31D1Q6ZQQ2 1576 aa24.28■■□□□ 1.48
LRFN4-203ENST00000531590 TNRQ92752 1358 aa24.28■■□□□ 1.48
LRFN4-203ENST00000531590 HRCP23327 699 aa24.27■■□□□ 1.48
LRFN4-203ENST00000531590 RPRD2Q5VT52 1461 aaKnown RBP24.26■■□□□ 1.47
LRFN4-203ENST00000531590 SLC4A1APQ9BWU0 796 aaKnown RBP24.25■■□□□ 1.47
LRFN4-203ENST00000531590 NOS1P29475 1434 aa24.25■■□□□ 1.47
LRFN4-203ENST00000531590 MPHOSPH9Q99550 1183 aa24.23■■□□□ 1.47
LRFN4-203ENST00000531590 ACIN1Q9UKV3 1341 aaKnown RBP24.22■■□□□ 1.47
LRFN4-203ENST00000531590 PKD2Q13563 968 aa24.22■■□□□ 1.47
LRFN4-203ENST00000531590 E9PCH4 1651 aa24.21■■□□□ 1.47
LRFN4-203ENST00000531590 LMTK3Q96Q04 1460 aa24.21■■□□□ 1.47
LRFN4-203ENST00000531590 UHRF1BP1Q6BDS2 1440 aa24.21■■□□□ 1.47
LRFN4-203ENST00000531590 PREX1Q8TCU6 1659 aa24.21■■□□□ 1.47
LRFN4-203ENST00000531590 PCGF6Q9BYE7 350 aa24.2■■□□□ 1.46
LRFN4-203ENST00000531590 SYNMO15061 1565 aa24.18■■□□□ 1.46
LRFN4-203ENST00000531590 FOXD1Q16676 465 aa24.18■■□□□ 1.46
LRFN4-203ENST00000531590 MYO3AQ8NEV4 1616 aa24.17■■□□□ 1.46
LRFN4-203ENST00000531590 PTPRTO14522 1441 aa24.16■■□□□ 1.46
LRFN4-203ENST00000531590 NLRP1Q9C000 1473 aa24.15■■□□□ 1.46
LRFN4-203ENST00000531590 PLA2R1Q13018 1463 aa24.14■■□□□ 1.46
LRFN4-203ENST00000531590 A2ML1A8K2U0 1454 aa24.13■■□□□ 1.45
LRFN4-203ENST00000531590 CEP170BQ9Y4F5 1589 aaPredicted RBP24.13■■□□□ 1.45
LRFN4-203ENST00000531590 HSPA2P54652 639 aa24.13■■□□□ 1.45
LRFN4-203ENST00000531590 IDI1Q13907 227 aa24.13■■□□□ 1.45
LRFN4-203ENST00000531590 UGGT1Q9NYU2 1555 aa24.12■■□□□ 1.45
LRFN4-203ENST00000531590 SLC52A1Q9NWF4 448 aa24.1■■□□□ 1.45
LRFN4-203ENST00000531590 TRPM2O94759 1503 aa24.08■■□□□ 1.45
LRFN4-203ENST00000531590 ZNF142P52746 1687 aaPredicted RBP24.08■■□□□ 1.44
LRFN4-203ENST00000531590 SETD1BQ9UPS6 1966 aaKnown RBP24.06■■□□□ 1.44
LRFN4-203ENST00000531590 PIK3C2BO00750 1634 aa24.05■■□□□ 1.44
LRFN4-203ENST00000531590 SPHKAPQ2M3C7 1700 aa24.04■■□□□ 1.44
LRFN4-203ENST00000531590 CFAP65Q6ZU64 1925 aaKnown RBP24.04■■□□□ 1.44
LRFN4-203ENST00000531590 ADGRB3O60242 1522 aa24.01■■□□□ 1.43
LRFN4-203ENST00000531590 CLTCL1P53675 1640 aa24■■□□□ 1.43
LRFN4-203ENST00000531590 THEMISQ8N1K5 641 aaPredicted RBP24■■□□□ 1.43
LRFN4-203ENST00000531590 STAG3Q9UJ98 1225 aa24■■□□□ 1.43
LRFN4-203ENST00000531590 DHX57Q6P158 1386 aaKnown RBP24■■□□□ 1.43
LRFN4-203ENST00000531590 ANKRD30BQ9BXX2 1392 aa24■■□□□ 1.43
LRFN4-203ENST00000531590 CHGAP10645 457 aaKnown RBP23.98■■□□□ 1.43
LRFN4-203ENST00000531590 UBR1Q8IWV7 1749 aa23.98■■□□□ 1.43
LRFN4-203ENST00000531590 CCDC144AA2RUR9 1427 aa23.96■■□□□ 1.43
LRFN4-203ENST00000531590 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.43
LRFN4-203ENST00000531590 ARHGAP23Q9P227 1491 aa23.94■■□□□ 1.42
LRFN4-203ENST00000531590 TMEM2Q9UHN6 1383 aa23.94■■□□□ 1.42
LRFN4-203ENST00000531590 NCKAP5LQ9HCH0 1330 aa23.93■■□□□ 1.42
LRFN4-203ENST00000531590 SLIT1O75093 1534 aa23.92■■□□□ 1.42
LRFN4-203ENST00000531590 KDM5AP29375 1690 aaKnown RBP23.92■■□□□ 1.42
LRFN4-203ENST00000531590 LTKP29376 864 aa23.9■■□□□ 1.42
LRFN4-203ENST00000531590 ANKLE2Q86XL3 938 aa23.89■■□□□ 1.41
LRFN4-203ENST00000531590 ZFYVE9O95405 1425 aa23.89■■□□□ 1.41
LRFN4-203ENST00000531590 SPATA31E1Q6ZUB1 1445 aa23.88■■□□□ 1.41
LRFN4-203ENST00000531590 RIMS2Q9UQ26 1411 aa23.87■■□□□ 1.41
LRFN4-203ENST00000531590 TXNDC2Q86VQ3 553 aa23.87■■□□□ 1.41
LRFN4-203ENST00000531590 STRCQ7RTU9 1775 aa23.86■■□□□ 1.41
LRFN4-203ENST00000531590 SCAF11Q99590 1463 aaKnown RBP23.86■■□□□ 1.41
LRFN4-203ENST00000531590 ZNF326Q5BKZ1 582 aaKnown RBP23.85■■□□□ 1.41
LRFN4-203ENST00000531590 NEURL4Q96JN8 1562 aa23.85■■□□□ 1.41
LRFN4-203ENST00000531590 NUTM2DQ5VT03 806 aaPredicted RBP23.84■■□□□ 1.41
LRFN4-203ENST00000531590 RGL3Q3MIN7 710 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms