RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ARID4BQ4LE39 1312 aaPredicted RBP28.15■■■□□ 2.1
SMPD1-205ENST00000531303 UNC13BO14795 1591 aa28.14■■■□□ 2.09
SMPD1-205ENST00000531303 ACIN1Q9UKV3 1341 aaKnown RBP28.11■■■□□ 2.09
SMPD1-205ENST00000531303 MLECQ14165 292 aa28.11■■■□□ 2.09
SMPD1-205ENST00000531303 CCER1Q8TC90 406 aaPredicted RBP28.1■■■□□ 2.09
SMPD1-205ENST00000531303 BCORL1Q5H9F3 1711 aa28.1■■■□□ 2.09
SMPD1-205ENST00000531303 DEPDC5O75140 1603 aa28.09■■■□□ 2.09
SMPD1-205ENST00000531303 DHX57Q6P158 1386 aaKnown RBP28.09■■■□□ 2.09
SMPD1-205ENST00000531303 RNF17Q9BXT8 1623 aaKnown RBP28.09■■■□□ 2.09
SMPD1-205ENST00000531303 MPHOSPH9Q99550 1183 aa28.08■■■□□ 2.09
SMPD1-205ENST00000531303 SLC4A1APQ9BWU0 796 aaKnown RBP28.08■■■□□ 2.09
SMPD1-205ENST00000531303 AGLP35573 1532 aa28.08■■■□□ 2.09
SMPD1-205ENST00000531303 MROH1Q8NDA8 1641 aa28.07■■■□□ 2.08
SMPD1-205ENST00000531303 KANK1Q14678 1352 aa28.07■■■□□ 2.08
SMPD1-205ENST00000531303 PZPP20742 1482 aa28.06■■■□□ 2.08
SMPD1-205ENST00000531303 KDM5DQ9BY66 1539 aa28.04■■■□□ 2.08
SMPD1-205ENST00000531303 PRDM15P57071 1507 aaPredicted RBP28.03■■■□□ 2.08
SMPD1-205ENST00000531303 FAM135AQ9P2D6 1515 aa28.03■■■□□ 2.08
SMPD1-205ENST00000531303 IQGAP3Q86VI3 1631 aa28.02■■■□□ 2.08
SMPD1-205ENST00000531303 FOXD1Q16676 465 aa28.01■■■□□ 2.07
SMPD1-205ENST00000531303 CEP152O94986 1710 aa28■■■□□ 2.07
SMPD1-205ENST00000531303 WASHC2CQ9Y4E1 1318 aa27.99■■■□□ 2.07
SMPD1-205ENST00000531303 PKD2Q13563 968 aa27.99■■■□□ 2.07
SMPD1-205ENST00000531303 VWDEQ8N2E2 1590 aa27.98■■■□□ 2.07
SMPD1-205ENST00000531303 ABCC3O15438 1527 aa27.93■■■□□ 2.06
SMPD1-205ENST00000531303 ESF1Q9H501 851 aaKnown RBP27.91■■■□□ 2.06
SMPD1-205ENST00000531303 TET3O43151 1660 aa27.91■■■□□ 2.06
SMPD1-205ENST00000531303 CLTCQ00610 1675 aaKnown RBP27.89■■■□□ 2.06
SMPD1-205ENST00000531303 CFAP65Q6ZU64 1925 aaKnown RBP27.89■■■□□ 2.05
SMPD1-205ENST00000531303 PPP6R1Q9UPN7 881 aa27.89■■■□□ 2.05
SMPD1-205ENST00000531303 LMTK2Q8IWU2 1503 aa27.87■■■□□ 2.05
SMPD1-205ENST00000531303 E9PCH4 1651 aa27.87■■■□□ 2.05
SMPD1-205ENST00000531303 ZC3H13Q5T200 1668 aaKnown RBP27.87■■■□□ 2.05
SMPD1-205ENST00000531303 CAMSAP1Q5T5Y3 1602 aa27.87■■■□□ 2.05
SMPD1-205ENST00000531303 EFCAB6Q5THR3 1501 aa27.85■■■□□ 2.05
SMPD1-205ENST00000531303 FER1L4A9Z1Z3 1794 aa27.82■■■□□ 2.04
SMPD1-205ENST00000531303 SIN3AQ96ST3 1273 aa27.81■■■□□ 2.04
SMPD1-205ENST00000531303 NEUROD1Q13562 356 aa27.79■■■□□ 2.04
SMPD1-205ENST00000531303 ANKRD30BQ9BXX2 1392 aa27.79■■■□□ 2.04
SMPD1-205ENST00000531303 NPATQ14207 1427 aa27.79■■■□□ 2.04
SMPD1-205ENST00000531303 CLSPNQ9HAW4 1339 aa27.77■■■□□ 2.04
SMPD1-205ENST00000531303 PLPPR3Q6T4P5 718 aa27.76■■■□□ 2.04
SMPD1-205ENST00000531303 CNTLNQ9NXG0 1405 aa27.75■■■□□ 2.03
SMPD1-205ENST00000531303 ZMYM3Q14202 1370 aa27.75■■■□□ 2.03
SMPD1-205ENST00000531303 MADDQ8WXG6 1647 aa27.75■■■□□ 2.03
SMPD1-205ENST00000531303 SPHKAPQ2M3C7 1700 aa27.74■■■□□ 2.03
SMPD1-205ENST00000531303 ARHGAP31Q2M1Z3 1444 aa27.73■■■□□ 2.03
SMPD1-205ENST00000531303 PLA2R1Q13018 1463 aa27.73■■■□□ 2.03
SMPD1-205ENST00000531303 RPRD2Q5VT52 1461 aaKnown RBP27.73■■■□□ 2.03
SMPD1-205ENST00000531303 ADAMTSL3P82987 1691 aa27.73■■■□□ 2.03
SMPD1-205ENST00000531303 FBXO31Q5XUX0 539 aaPredicted RBP27.72■■■□□ 2.03
SMPD1-205ENST00000531303 RIMS1Q86UR5 1692 aaKnown RBP27.72■■■□□ 2.03
SMPD1-205ENST00000531303 CEBPAP49715 358 aaPredicted RBP27.7■■■□□ 2.03
SMPD1-205ENST00000531303 MROH2AA6NES4 1674 aa27.7■■■□□ 2.03
SMPD1-205ENST00000531303 PREX1Q8TCU6 1659 aa27.68■■■□□ 2.02
SMPD1-205ENST00000531303 PTPRTO14522 1441 aa27.68■■■□□ 2.02
SMPD1-205ENST00000531303 CCDC144AA2RUR9 1427 aa27.66■■■□□ 2.02
SMPD1-205ENST00000531303 C3P01024 1663 aa27.66■■■□□ 2.02
SMPD1-205ENST00000531303 TRPM2O94759 1503 aa27.65■■■□□ 2.02
SMPD1-205ENST00000531303 ERVK-7P63135 1459 aa27.64■■■□□ 2.02
SMPD1-205ENST00000531303 NOS1P29475 1434 aa27.63■■■□□ 2.01
SMPD1-205ENST00000531303 UGGT1Q9NYU2 1555 aa27.63■■■□□ 2.01
SMPD1-205ENST00000531303 SYNMO15061 1565 aa27.62■■■□□ 2.01
SMPD1-205ENST00000531303 CLTCL1P53675 1640 aa27.62■■■□□ 2.01
SMPD1-205ENST00000531303 SPATA31D1Q6ZQQ2 1576 aa27.58■■■□□ 2.01
SMPD1-205ENST00000531303 CHGAP10645 457 aaKnown RBP27.57■■■□□ 2
SMPD1-205ENST00000531303 TONSLQ96HA7 1378 aa27.55■■■□□ 2
SMPD1-205ENST00000531303 TNRQ92752 1358 aa27.54■■■□□ 2
SMPD1-205ENST00000531303 IDI1Q13907 227 aa27.54■■■□□ 2
SMPD1-205ENST00000531303 KDM4FA0A1W2PPD8 638 aa27.53■■■□□ 2
SMPD1-205ENST00000531303 RGL3Q3MIN7 710 aa27.53■■■□□ 2
SMPD1-205ENST00000531303 KIF1BO60333 1816 aa27.53■■■□□ 2
SMPD1-205ENST00000531303 ZEB1P37275 1124 aaPredicted RBP27.52■■■□□ 2
SMPD1-205ENST00000531303 PTPRMP28827 1452 aa27.52■■■□□ 2
SMPD1-205ENST00000531303 SLC52A1Q9NWF4 448 aa27.51■■■□□ 2
SMPD1-205ENST00000531303 PIK3C2BO00750 1634 aa27.51■■□□□ 1.99
SMPD1-205ENST00000531303 L3MBTL2Q969R5 705 aa27.47■■□□□ 1.99
SMPD1-205ENST00000531303 STAG3Q9UJ98 1225 aa27.46■■□□□ 1.99
SMPD1-205ENST00000531303 ZNF326Q5BKZ1 582 aaKnown RBP27.44■■□□□ 1.98
SMPD1-205ENST00000531303 SPATA31E1Q6ZUB1 1445 aa27.44■■□□□ 1.98
SMPD1-205ENST00000531303 MYO5BQ9ULV0 1848 aa27.44■■□□□ 1.98
SMPD1-205ENST00000531303 TIMELESSQ9UNS1 1208 aa27.42■■□□□ 1.98
SMPD1-205ENST00000531303 KDM2AQ9Y2K7 1162 aa27.41■■□□□ 1.98
SMPD1-205ENST00000531303 DCAF11Q8TEB1 546 aa27.4■■□□□ 1.98
SMPD1-205ENST00000531303 ADGRB3O60242 1522 aa27.4■■□□□ 1.98
SMPD1-205ENST00000531303 SETD1BQ9UPS6 1966 aaKnown RBP27.39■■□□□ 1.98
SMPD1-205ENST00000531303 TMEM131LA2VDJ0 1609 aa27.39■■□□□ 1.98
SMPD1-205ENST00000531303 MYO3AQ8NEV4 1616 aa27.38■■□□□ 1.97
SMPD1-205ENST00000531303 NLRP1Q9C000 1473 aa27.38■■□□□ 1.97
SMPD1-205ENST00000531303 PPP1R15AO75807 674 aaPredicted RBP27.34■■□□□ 1.97
SMPD1-205ENST00000531303 NEURL4Q96JN8 1562 aa27.33■■□□□ 1.97
SMPD1-205ENST00000531303 A2ML1A8K2U0 1454 aa27.33■■□□□ 1.96
SMPD1-205ENST00000531303 NUTM2DQ5VT03 806 aaPredicted RBP27.32■■□□□ 1.96
SMPD1-205ENST00000531303 UBR1Q8IWV7 1749 aa27.32■■□□□ 1.96
SMPD1-205ENST00000531303 CEP170BQ9Y4F5 1589 aaPredicted RBP27.29■■□□□ 1.96
SMPD1-205ENST00000531303 PPLO60437 1756 aa27.28■■□□□ 1.96
SMPD1-205ENST00000531303 RPGRIP1LQ68CZ1 1315 aa27.27■■□□□ 1.96
SMPD1-205ENST00000531303 IFT172Q9UG01 1749 aa27.27■■□□□ 1.96
SMPD1-205ENST00000531303 UHRF1BP1Q6BDS2 1440 aa27.26■■□□□ 1.95
SMPD1-205ENST00000531303 KDM5AP29375 1690 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms