RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 KIF3BO15066 747 aa18.21■□□□□ 0.51
LTBP3-219ENST00000530990 GGT6Q6P531 493 aa18.21■□□□□ 0.51
LTBP3-219ENST00000530990 RRP7BPQ9NSQ0 103 aa18.21■□□□□ 0.51
LTBP3-219ENST00000530990 DEPDC5O75140 1603 aa18.2■□□□□ 0.5
LTBP3-219ENST00000530990 KDM5DQ9BY66 1539 aa18.2■□□□□ 0.5
LTBP3-219ENST00000530990 FAM135AQ9P2D6 1515 aa18.2■□□□□ 0.5
LTBP3-219ENST00000530990 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
LTBP3-219ENST00000530990 ZC3H13Q5T200 1668 aaKnown RBP18.19■□□□□ 0.5
LTBP3-219ENST00000530990 CEP152O94986 1710 aa18.19■□□□□ 0.5
LTBP3-219ENST00000530990 PRDM15P57071 1507 aaPredicted RBP18.18■□□□□ 0.5
LTBP3-219ENST00000530990 ESF1Q9H501 851 aaKnown RBP18.17■□□□□ 0.5
LTBP3-219ENST00000530990 PREX1Q8TCU6 1659 aa18.16■□□□□ 0.5
LTBP3-219ENST00000530990 ITGAEP38570 1179 aa18.16■□□□□ 0.5
LTBP3-219ENST00000530990 CEBPAP49715 358 aaPredicted RBP18.16■□□□□ 0.5
LTBP3-219ENST00000530990 ROCK1Q13464 1354 aa18.15■□□□□ 0.5
LTBP3-219ENST00000530990 ABCC3O15438 1527 aa18.14■□□□□ 0.49
LTBP3-219ENST00000530990 CAMSAP1Q5T5Y3 1602 aa18.13■□□□□ 0.49
LTBP3-219ENST00000530990 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
LTBP3-219ENST00000530990 GCC2Q8IWJ2 1684 aa18.12■□□□□ 0.49
LTBP3-219ENST00000530990 ZMYM3Q14202 1370 aa18.12■□□□□ 0.49
LTBP3-219ENST00000530990 ANKRD50Q9ULJ7 1429 aa18.12■□□□□ 0.49
LTBP3-219ENST00000530990 LMTK3Q96Q04 1460 aa18.12■□□□□ 0.49
LTBP3-219ENST00000530990 UNC13BO14795 1591 aa18.1■□□□□ 0.49
LTBP3-219ENST00000530990 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
LTBP3-219ENST00000530990 MYO3AQ8NEV4 1616 aa18.09■□□□□ 0.49
LTBP3-219ENST00000530990 VWDEQ8N2E2 1590 aa18.09■□□□□ 0.49
LTBP3-219ENST00000530990 PZPP20742 1482 aa18.08■□□□□ 0.49
LTBP3-219ENST00000530990 NPATQ14207 1427 aa18.08■□□□□ 0.49
LTBP3-219ENST00000530990 WASHC2CQ9Y4E1 1318 aa18.08■□□□□ 0.49
LTBP3-219ENST00000530990 ZNF142P52746 1687 aaPredicted RBP18.06■□□□□ 0.48
LTBP3-219ENST00000530990 UHRF1BP1Q6BDS2 1440 aa18.05■□□□□ 0.48
LTBP3-219ENST00000530990 LMTK2Q8IWU2 1503 aa18.04■□□□□ 0.48
LTBP3-219ENST00000530990 CFAP65Q6ZU64 1925 aaKnown RBP18.04■□□□□ 0.48
LTBP3-219ENST00000530990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
LTBP3-219ENST00000530990 KANK1Q14678 1352 aa18.03■□□□□ 0.48
LTBP3-219ENST00000530990 NAIPQ13075 1403 aa18.02■□□□□ 0.48
LTBP3-219ENST00000530990 TET3O43151 1660 aa18.02■□□□□ 0.47
LTBP3-219ENST00000530990 EFCAB6Q5THR3 1501 aa18.02■□□□□ 0.47
LTBP3-219ENST00000530990 IQGAP3Q86VI3 1631 aa18.01■□□□□ 0.47
LTBP3-219ENST00000530990 SPATA31D1Q6ZQQ2 1576 aa18.01■□□□□ 0.47
LTBP3-219ENST00000530990 HFM1A2PYH4 1435 aa18.01■□□□□ 0.47
LTBP3-219ENST00000530990 CEP170BQ9Y4F5 1589 aaPredicted RBP18■□□□□ 0.47
LTBP3-219ENST00000530990 ERVK-7P63135 1459 aa18■□□□□ 0.47
LTBP3-219ENST00000530990 ARHGAP31Q2M1Z3 1444 aa17.98■□□□□ 0.47
LTBP3-219ENST00000530990 FBXO31Q5XUX0 539 aaPredicted RBP17.98■□□□□ 0.47
LTBP3-219ENST00000530990 ILDR1Q86SU0 546 aaPredicted RBP17.98■□□□□ 0.47
LTBP3-219ENST00000530990 TNRQ92752 1358 aa17.97■□□□□ 0.47
LTBP3-219ENST00000530990 HSPA2P54652 639 aa17.97■□□□□ 0.47
LTBP3-219ENST00000530990 E9PCH4 1651 aa17.96■□□□□ 0.47
LTBP3-219ENST00000530990 A2ML1A8K2U0 1454 aa17.94■□□□□ 0.46
LTBP3-219ENST00000530990 STRCQ7RTU9 1775 aa17.94■□□□□ 0.46
LTBP3-219ENST00000530990 SYNMO15061 1565 aa17.92■□□□□ 0.46
LTBP3-219ENST00000530990 NLRP1Q9C000 1473 aa17.92■□□□□ 0.46
LTBP3-219ENST00000530990 RPRD2Q5VT52 1461 aaKnown RBP17.91■□□□□ 0.46
LTBP3-219ENST00000530990 NUP155O75694 1391 aa17.91■□□□□ 0.46
LTBP3-219ENST00000530990 UBR1Q8IWV7 1749 aa17.89■□□□□ 0.46
LTBP3-219ENST00000530990 PIK3C2BO00750 1634 aa17.89■□□□□ 0.45
LTBP3-219ENST00000530990 UGGT1Q9NYU2 1555 aa17.88■□□□□ 0.45
LTBP3-219ENST00000530990 NOS1P29475 1434 aa17.88■□□□□ 0.45
LTBP3-219ENST00000530990 POLR1AO95602 1720 aaPredicted RBP17.87■□□□□ 0.45
LTBP3-219ENST00000530990 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
LTBP3-219ENST00000530990 PLA2R1Q13018 1463 aa17.86■□□□□ 0.45
LTBP3-219ENST00000530990 KDM5AP29375 1690 aaKnown RBP17.84■□□□□ 0.45
LTBP3-219ENST00000530990 MYO5BQ9ULV0 1848 aa17.83■□□□□ 0.44
LTBP3-219ENST00000530990 SETD5Q9C0A6 1442 aa17.82■□□□□ 0.44
LTBP3-219ENST00000530990 ADGRB3O60242 1522 aa17.82■□□□□ 0.44
LTBP3-219ENST00000530990 NEURL4Q96JN8 1562 aa17.8■□□□□ 0.44
LTBP3-219ENST00000530990 TRIM52Q96A61 297 aa17.8■□□□□ 0.44
LTBP3-219ENST00000530990 RAB3GAP2Q9H2M9 1393 aa17.79■□□□□ 0.44
LTBP3-219ENST00000530990 FBXO41Q8TF61 875 aa17.78■□□□□ 0.44
LTBP3-219ENST00000530990 TRPM2O94759 1503 aa17.77■□□□□ 0.43
LTBP3-219ENST00000530990 TMEM131LA2VDJ0 1609 aa17.76■□□□□ 0.43
LTBP3-219ENST00000530990 IDI1Q13907 227 aa17.76■□□□□ 0.43
LTBP3-219ENST00000530990 SLIT1O75093 1534 aa17.76■□□□□ 0.43
LTBP3-219ENST00000530990 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
LTBP3-219ENST00000530990 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
LTBP3-219ENST00000530990 PTPRTO14522 1441 aa17.75■□□□□ 0.43
LTBP3-219ENST00000530990 THEMISQ8N1K5 641 aaPredicted RBP17.75■□□□□ 0.43
LTBP3-219ENST00000530990 ARHGAP23Q9P227 1491 aa17.75■□□□□ 0.43
LTBP3-219ENST00000530990 IQGAP1P46940 1657 aa17.74■□□□□ 0.43
LTBP3-219ENST00000530990 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
LTBP3-219ENST00000530990 SLC52A1Q9NWF4 448 aa17.73■□□□□ 0.43
LTBP3-219ENST00000530990 PKD2Q13563 968 aa17.72■□□□□ 0.43
LTBP3-219ENST00000530990 KIF1BO60333 1816 aa17.71■□□□□ 0.43
LTBP3-219ENST00000530990 SCAF11Q99590 1463 aaKnown RBP17.7■□□□□ 0.42
LTBP3-219ENST00000530990 STAG3Q9UJ98 1225 aa17.7■□□□□ 0.42
LTBP3-219ENST00000530990 MED14O60244 1454 aa17.69■□□□□ 0.42
LTBP3-219ENST00000530990 TMEM2Q9UHN6 1383 aa17.69■□□□□ 0.42
LTBP3-219ENST00000530990 DMRT2Q9Y5R5 561 aa17.69■□□□□ 0.42
LTBP3-219ENST00000530990 NPHP4O75161 1426 aaPredicted RBP17.68■□□□□ 0.42
LTBP3-219ENST00000530990 ANKLE2Q86XL3 938 aa17.68■□□□□ 0.42
LTBP3-219ENST00000530990 MPHOSPH9Q99550 1183 aa17.68■□□□□ 0.42
LTBP3-219ENST00000530990 ACIN1Q9UKV3 1341 aaKnown RBP17.67■□□□□ 0.42
LTBP3-219ENST00000530990 FOXD1Q16676 465 aa17.66■□□□□ 0.42
LTBP3-219ENST00000530990 ZFYVE9O95405 1425 aa17.65■□□□□ 0.42
LTBP3-219ENST00000530990 CHGAP10645 457 aaKnown RBP17.64■□□□□ 0.41
LTBP3-219ENST00000530990 LTKP29376 864 aa17.64■□□□□ 0.41
LTBP3-219ENST00000530990 CERKQ8TCT0 537 aa17.63■□□□□ 0.41
LTBP3-219ENST00000530990 RIMS2Q9UQ26 1411 aa17.63■□□□□ 0.41
LTBP3-219ENST00000530990 LTBP4Q8N2S1 1624 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms