RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 C3P01024 1663 aa14.07□□□□□ -0.16
SF3B2-210ENST00000530981 RNF17Q9BXT8 1623 aaKnown RBP14.07□□□□□ -0.16
SF3B2-210ENST00000530981 ZMYM3Q14202 1370 aa14.06□□□□□ -0.16
SF3B2-210ENST00000530981 EIF2AK4Q9P2K8 1649 aaKnown RBP14.05□□□□□ -0.16
SF3B2-210ENST00000530981 ROCK1Q13464 1354 aa14.05□□□□□ -0.16
SF3B2-210ENST00000530981 FBXO31Q5XUX0 539 aaPredicted RBP14.04□□□□□ -0.16
SF3B2-210ENST00000530981 ERBINQ96RT1 1412 aa14.04□□□□□ -0.16
SF3B2-210ENST00000530981 ANKRD50Q9ULJ7 1429 aa14.03□□□□□ -0.16
SF3B2-210ENST00000530981 DEPDC5O75140 1603 aa14.03□□□□□ -0.16
SF3B2-210ENST00000530981 ABCC3O15438 1527 aa14.02□□□□□ -0.16
SF3B2-210ENST00000530981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.174e-10■■■■□ 21.3
SF3B2-210ENST00000530981 CEP152O94986 1710 aa14.01□□□□□ -0.17
SF3B2-210ENST00000530981 WASHC2CQ9Y4E1 1318 aa14.01□□□□□ -0.17
SF3B2-210ENST00000530981 MROH2AA6NES4 1674 aa14.01□□□□□ -0.17
SF3B2-210ENST00000530981 PRDM15P57071 1507 aaPredicted RBP14□□□□□ -0.17
SF3B2-210ENST00000530981 NAIPQ13075 1403 aa14□□□□□ -0.17
SF3B2-210ENST00000530981 CNTLNQ9NXG0 1405 aa14□□□□□ -0.17
SF3B2-210ENST00000530981 PPP6R1Q9UPN7 881 aa14□□□□□ -0.17
SF3B2-210ENST00000530981 VWDEQ8N2E2 1590 aa14□□□□□ -0.17
SF3B2-210ENST00000530981 KDM5DQ9BY66 1539 aa14□□□□□ -0.17
SF3B2-210ENST00000530981 LMTK3Q96Q04 1460 aa13.99□□□□□ -0.17
SF3B2-210ENST00000530981 HSPA2P54652 639 aa13.98□□□□□ -0.17
SF3B2-210ENST00000530981 ESF1Q9H501 851 aaKnown RBP13.98□□□□□ -0.17
SF3B2-210ENST00000530981 CFAP65Q6ZU64 1925 aaKnown RBP13.98□□□□□ -0.17
SF3B2-210ENST00000530981 CAMSAP1Q5T5Y3 1602 aa13.96□□□□□ -0.17
SF3B2-210ENST00000530981 SETD1BQ9UPS6 1966 aaKnown RBP13.95□□□□□ -0.18
SF3B2-210ENST00000530981 UNC13BO14795 1591 aa13.95□□□□□ -0.18
SF3B2-210ENST00000530981 PZPP20742 1482 aa13.94□□□□□ -0.18
SF3B2-210ENST00000530981 HFM1A2PYH4 1435 aa13.94□□□□□ -0.18
SF3B2-210ENST00000530981 GCC2Q8IWJ2 1684 aa13.94□□□□□ -0.18
SF3B2-210ENST00000530981 NPATQ14207 1427 aa13.93□□□□□ -0.18
SF3B2-210ENST00000530981 ZC3H13Q5T200 1668 aaKnown RBP13.93□□□□□ -0.18
SF3B2-210ENST00000530981 LMTK2Q8IWU2 1503 aa13.93□□□□□ -0.18
SF3B2-210ENST00000530981 FAM135AQ9P2D6 1515 aa13.93□□□□□ -0.18
SF3B2-210ENST00000530981 PREX1Q8TCU6 1659 aa13.92□□□□□ -0.18
SF3B2-210ENST00000530981 NUP155O75694 1391 aa13.9□□□□□ -0.18
SF3B2-210ENST00000530981 ERVK-7P63135 1459 aa13.9□□□□□ -0.18
SF3B2-210ENST00000530981 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.19
SF3B2-210ENST00000530981 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.19
SF3B2-210ENST00000530981 SPATA31D1Q6ZQQ2 1576 aa13.89□□□□□ -0.19
SF3B2-210ENST00000530981 IQGAP3Q86VI3 1631 aa13.89□□□□□ -0.19
SF3B2-210ENST00000530981 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
SF3B2-210ENST00000530981 KANK1Q14678 1352 aa13.88□□□□□ -0.19
SF3B2-210ENST00000530981 TNRQ92752 1358 aa13.88□□□□□ -0.19
SF3B2-210ENST00000530981 E9PCH4 1651 aa13.88□□□□□ -0.19
SF3B2-210ENST00000530981 TET3O43151 1660 aa13.87□□□□□ -0.19
SF3B2-210ENST00000530981 UHRF1BP1Q6BDS2 1440 aa13.87□□□□□ -0.19
SF3B2-210ENST00000530981 SYNMO15061 1565 aa13.87□□□□□ -0.19
SF3B2-210ENST00000530981 CEP170BQ9Y4F5 1589 aaPredicted RBP13.86□□□□□ -0.19
SF3B2-210ENST00000530981 STRCQ7RTU9 1775 aa13.86□□□□□ -0.19
SF3B2-210ENST00000530981 NOS1P29475 1434 aa13.85□□□□□ -0.19
SF3B2-210ENST00000530981 SETD5Q9C0A6 1442 aa13.84□□□□□ -0.19
SF3B2-210ENST00000530981 ZNF142P52746 1687 aaPredicted RBP13.84□□□□□ -0.19
SF3B2-210ENST00000530981 UGGT1Q9NYU2 1555 aa13.83□□□□□ -0.19
SF3B2-210ENST00000530981 A2ML1A8K2U0 1454 aa13.83□□□□□ -0.2
SF3B2-210ENST00000530981 IDI1Q13907 227 aa13.83□□□□□ -0.2
SF3B2-210ENST00000530981 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.2
SF3B2-210ENST00000530981 FOXD1Q16676 465 aa13.82□□□□□ -0.2
SF3B2-210ENST00000530981 TRIM52Q96A61 297 aa13.82□□□□□ -0.2
SF3B2-210ENST00000530981 PLA2R1Q13018 1463 aa13.81□□□□□ -0.2
SF3B2-210ENST00000530981 PIK3C2BO00750 1634 aa13.8□□□□□ -0.2
SF3B2-210ENST00000530981 NCKAP5LQ9HCH0 1330 aa13.8□□□□□ -0.2
SF3B2-210ENST00000530981 RPRD2Q5VT52 1461 aaKnown RBP13.8□□□□□ -0.2
SF3B2-210ENST00000530981 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
SF3B2-210ENST00000530981 UBR1Q8IWV7 1749 aa13.79□□□□□ -0.2
SF3B2-210ENST00000530981 PKD2Q13563 968 aa13.78□□□□□ -0.2
SF3B2-210ENST00000530981 PTPRTO14522 1441 aa13.78□□□□□ -0.2
SF3B2-210ENST00000530981 MPHOSPH9Q99550 1183 aa13.77□□□□□ -0.21
SF3B2-210ENST00000530981 MYO5BQ9ULV0 1848 aa13.76□□□□□ -0.21
SF3B2-210ENST00000530981 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
SF3B2-210ENST00000530981 NEURL4Q96JN8 1562 aa13.75□□□□□ -0.21
SF3B2-210ENST00000530981 LTKP29376 864 aa13.75□□□□□ -0.21
SF3B2-210ENST00000530981 SPHKAPQ2M3C7 1700 aa13.74□□□□□ -0.21
SF3B2-210ENST00000530981 TMEM131LA2VDJ0 1609 aa13.73□□□□□ -0.21
SF3B2-210ENST00000530981 CLTCL1P53675 1640 aa13.73□□□□□ -0.21
SF3B2-210ENST00000530981 THEMISQ8N1K5 641 aaPredicted RBP13.73□□□□□ -0.21
SF3B2-210ENST00000530981 ARHGAP23Q9P227 1491 aa13.73□□□□□ -0.21
SF3B2-210ENST00000530981 SLC52A1Q9NWF4 448 aa13.72□□□□□ -0.21
SF3B2-210ENST00000530981 ADGRB3O60242 1522 aa13.71□□□□□ -0.21
SF3B2-210ENST00000530981 SLIT1O75093 1534 aa13.7□□□□□ -0.22
SF3B2-210ENST00000530981 TRIM26Q12899 539 aaPredicted RBP13.7□□□□□ -0.22
SF3B2-210ENST00000530981 SENP3Q9H4L4 574 aaPredicted RBP13.7□□□□□ -0.22
SF3B2-210ENST00000530981 TMEM2Q9UHN6 1383 aa13.7□□□□□ -0.22
SF3B2-210ENST00000530981 TRPM2O94759 1503 aa13.69□□□□□ -0.22
SF3B2-210ENST00000530981 HRCP23327 699 aa13.69□□□□□ -0.22
SF3B2-210ENST00000530981 NUTM2DQ5VT03 806 aaPredicted RBP13.69□□□□□ -0.22
SF3B2-210ENST00000530981 POLR1AO95602 1720 aaPredicted RBP13.69□□□□□ -0.22
SF3B2-210ENST00000530981 KDM5AP29375 1690 aaKnown RBP13.69□□□□□ -0.22
SF3B2-210ENST00000530981 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
SF3B2-210ENST00000530981 TXNDC2Q86VQ3 553 aa13.68□□□□□ -0.22
SF3B2-210ENST00000530981 ANKLE2Q86XL3 938 aa13.68□□□□□ -0.22
SF3B2-210ENST00000530981 CHGAP10645 457 aaKnown RBP13.67□□□□□ -0.22
SF3B2-210ENST00000530981 MED14O60244 1454 aa13.67□□□□□ -0.22
SF3B2-210ENST00000530981 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
SF3B2-210ENST00000530981 SCAF11Q99590 1463 aaKnown RBP13.66□□□□□ -0.22
SF3B2-210ENST00000530981 NPHP4O75161 1426 aaPredicted RBP13.65□□□□□ -0.22
SF3B2-210ENST00000530981 ZNF335Q9H4Z2 1342 aaPredicted RBP13.64□□□□□ -0.23
SF3B2-210ENST00000530981 RIMS2Q9UQ26 1411 aa13.64□□□□□ -0.23
SF3B2-210ENST00000530981 ANKRD30BQ9BXX2 1392 aa13.64□□□□□ -0.23
SF3B2-210ENST00000530981 LTBP4Q8N2S1 1624 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms