RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 HRCP23327 699 aa36.82■■■■□ 3.48
ME3-209ENST00000530520 ARID4BQ4LE39 1312 aaPredicted RBP36.8■■■■□ 3.48
ME3-209ENST00000530520 TRIM52Q96A61 297 aa36.79■■■■□ 3.48
ME3-209ENST00000530520 ACIN1Q9UKV3 1341 aaKnown RBP36.77■■■■□ 3.48
ME3-209ENST00000530520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.76■■■■□ 3.48
ME3-209ENST00000530520 MROH1Q8NDA8 1641 aa36.76■■■■□ 3.47
ME3-209ENST00000530520 GGT6Q6P531 493 aa36.75■■■■□ 3.47
ME3-209ENST00000530520 PRDM15P57071 1507 aaPredicted RBP36.75■■■■□ 3.47
ME3-209ENST00000530520 NUP155O75694 1391 aa36.71■■■■□ 3.47
ME3-209ENST00000530520 KDM5DQ9BY66 1539 aa36.7■■■■□ 3.47
ME3-209ENST00000530520 KANK1Q14678 1352 aa36.69■■■■□ 3.46
ME3-209ENST00000530520 MLECQ14165 292 aa36.69■■■■□ 3.46
ME3-209ENST00000530520 IQGAP3Q86VI3 1631 aa36.68■■■■□ 3.46
ME3-209ENST00000530520 FAM135AQ9P2D6 1515 aa36.64■■■■□ 3.46
ME3-209ENST00000530520 VWDEQ8N2E2 1590 aa36.64■■■■□ 3.46
ME3-209ENST00000530520 CEP152O94986 1710 aa36.64■■■■□ 3.46
ME3-209ENST00000530520 PZPP20742 1482 aa36.61■■■■□ 3.45
ME3-209ENST00000530520 ZC3H13Q5T200 1668 aaKnown RBP36.6■■■■□ 3.45
ME3-209ENST00000530520 WASHC2CQ9Y4E1 1318 aa36.57■■■■□ 3.45
ME3-209ENST00000530520 ABCC3O15438 1527 aa36.57■■■■□ 3.44
ME3-209ENST00000530520 SLC4A1APQ9BWU0 796 aaKnown RBP36.57■■■■□ 3.44
ME3-209ENST00000530520 PPP6R1Q9UPN7 881 aa36.55■■■■□ 3.44
ME3-209ENST00000530520 TET3O43151 1660 aa36.55■■■■□ 3.44
ME3-209ENST00000530520 MPHOSPH9Q99550 1183 aa36.54■■■■□ 3.44
ME3-209ENST00000530520 CLTCQ00610 1675 aaKnown RBP36.54■■■■□ 3.44
ME3-209ENST00000530520 LMTK2Q8IWU2 1503 aa36.53■■■■□ 3.44
ME3-209ENST00000530520 FER1L4A9Z1Z3 1794 aa36.52■■■■□ 3.44
ME3-209ENST00000530520 ESF1Q9H501 851 aaKnown RBP36.52■■■■□ 3.44
ME3-209ENST00000530520 DHX57Q6P158 1386 aaKnown RBP36.51■■■■□ 3.44
ME3-209ENST00000530520 CAMSAP1Q5T5Y3 1602 aa36.51■■■■□ 3.44
ME3-209ENST00000530520 EFCAB6Q5THR3 1501 aa36.47■■■■□ 3.43
ME3-209ENST00000530520 E9PCH4 1651 aa36.45■■■■□ 3.43
ME3-209ENST00000530520 ADAMTSL3P82987 1691 aa36.45■■■■□ 3.43
ME3-209ENST00000530520 PKD2Q13563 968 aa36.44■■■■□ 3.42
ME3-209ENST00000530520 MADDQ8WXG6 1647 aa36.43■■■■□ 3.42
ME3-209ENST00000530520 CNTLNQ9NXG0 1405 aa36.43■■■■□ 3.42
ME3-209ENST00000530520 MROH2AA6NES4 1674 aa36.41■■■■□ 3.42
ME3-209ENST00000530520 RIMS1Q86UR5 1692 aaKnown RBP36.38■■■■□ 3.41
ME3-209ENST00000530520 FOXD1Q16676 465 aa36.37■■■■□ 3.41
ME3-209ENST00000530520 CCER1Q8TC90 406 aaPredicted RBP36.37■■■■□ 3.41
ME3-209ENST00000530520 NPATQ14207 1427 aa36.35■■■■□ 3.41
ME3-209ENST00000530520 CFAP65Q6ZU64 1925 aaKnown RBP36.35■■■■□ 3.41
ME3-209ENST00000530520 ARHGAP31Q2M1Z3 1444 aa36.34■■■■□ 3.41
ME3-209ENST00000530520 RPRD2Q5VT52 1461 aaKnown RBP36.34■■■■□ 3.41
ME3-209ENST00000530520 ZMYM3Q14202 1370 aa36.32■■■■□ 3.4
ME3-209ENST00000530520 SPHKAPQ2M3C7 1700 aa36.3■■■■□ 3.4
ME3-209ENST00000530520 C3P01024 1663 aa36.29■■■■□ 3.4
ME3-209ENST00000530520 PREX1Q8TCU6 1659 aa36.26■■■■□ 3.4
ME3-209ENST00000530520 ANKRD30BQ9BXX2 1392 aa36.21■■■■□ 3.39
ME3-209ENST00000530520 ERVK-7P63135 1459 aa36.2■■■■□ 3.39
ME3-209ENST00000530520 TRPM2O94759 1503 aa36.19■■■■□ 3.38
ME3-209ENST00000530520 PTPRTO14522 1441 aa36.19■■■■□ 3.38
ME3-209ENST00000530520 PLPPR3Q6T4P5 718 aa36.19■■■■□ 3.38
ME3-209ENST00000530520 CEBPAP49715 358 aaPredicted RBP36.18■■■■□ 3.38
ME3-209ENST00000530520 FBXO31Q5XUX0 539 aaPredicted RBP36.18■■■■□ 3.38
ME3-209ENST00000530520 PLA2R1Q13018 1463 aa36.18■■■■□ 3.38
ME3-209ENST00000530520 CLSPNQ9HAW4 1339 aa36.18■■■■□ 3.38
ME3-209ENST00000530520 SPATA31D1Q6ZQQ2 1576 aa36.17■■■■□ 3.38
ME3-209ENST00000530520 NOS1P29475 1434 aa36.16■■■■□ 3.38
ME3-209ENST00000530520 SYNMO15061 1565 aa36.14■■■■□ 3.38
ME3-209ENST00000530520 PTPRMP28827 1452 aa36.14■■■■□ 3.38
ME3-209ENST00000530520 CCDC144AA2RUR9 1427 aa36.11■■■■□ 3.37
ME3-209ENST00000530520 KDM4FA0A1W2PPD8 638 aa36.1■■■■□ 3.37
ME3-209ENST00000530520 CLTCL1P53675 1640 aa36.09■■■■□ 3.37
ME3-209ENST00000530520 UGGT1Q9NYU2 1555 aa36.08■■■■□ 3.37
ME3-209ENST00000530520 SIN3AQ96ST3 1273 aa36.06■■■■□ 3.36
ME3-209ENST00000530520 TNRQ92752 1358 aa36.05■■■■□ 3.36
ME3-209ENST00000530520 PIK3C2BO00750 1634 aa36.05■■■■□ 3.36
ME3-209ENST00000530520 NEUROD1Q13562 356 aa36.02■■■■□ 3.36
ME3-209ENST00000530520 KIF1BO60333 1816 aa36■■■■□ 3.35
ME3-209ENST00000530520 SLC52A1Q9NWF4 448 aa35.99■■■■□ 3.35
ME3-209ENST00000530520 MYO3AQ8NEV4 1616 aa35.95■■■■□ 3.35
ME3-209ENST00000530520 IDI1Q13907 227 aa35.94■■■■□ 3.34
ME3-209ENST00000530520 SETD1BQ9UPS6 1966 aaKnown RBP35.93■■■■□ 3.34
ME3-209ENST00000530520 NLRP1Q9C000 1473 aa35.92■■■■□ 3.34
ME3-209ENST00000530520 CHGAP10645 457 aaKnown RBP35.89■■■■□ 3.34
ME3-209ENST00000530520 MYO5BQ9ULV0 1848 aa35.87■■■■□ 3.33
ME3-209ENST00000530520 ADGRB3O60242 1522 aa35.86■■■■□ 3.33
ME3-209ENST00000530520 TMEM131LA2VDJ0 1609 aa35.86■■■■□ 3.33
ME3-209ENST00000530520 STAG3Q9UJ98 1225 aa35.85■■■■□ 3.33
ME3-209ENST00000530520 TONSLQ96HA7 1378 aa35.84■■■■□ 3.33
ME3-209ENST00000530520 SPATA31E1Q6ZUB1 1445 aa35.84■■■■□ 3.33
ME3-209ENST00000530520 NEURL4Q96JN8 1562 aa35.83■■■■□ 3.33
ME3-209ENST00000530520 UBR1Q8IWV7 1749 aa35.82■■■■□ 3.33
ME3-209ENST00000530520 KDM5AP29375 1690 aaKnown RBP35.82■■■■□ 3.32
ME3-209ENST00000530520 ZNF142P52746 1687 aaPredicted RBP35.81■■■■□ 3.32
ME3-209ENST00000530520 CEP170BQ9Y4F5 1589 aaPredicted RBP35.81■■■■□ 3.32
ME3-209ENST00000530520 RGL3Q3MIN7 710 aa35.81■■■■□ 3.32
ME3-209ENST00000530520 A2ML1A8K2U0 1454 aa35.81■■■■□ 3.32
ME3-209ENST00000530520 UHRF1BP1Q6BDS2 1440 aa35.79■■■■□ 3.32
ME3-209ENST00000530520 ZNF326Q5BKZ1 582 aaKnown RBP35.76■■■■□ 3.32
ME3-209ENST00000530520 TIMELESSQ9UNS1 1208 aa35.72■■■■□ 3.31
ME3-209ENST00000530520 L3MBTL2Q969R5 705 aa35.71■■■■□ 3.31
ME3-209ENST00000530520 IFT172Q9UG01 1749 aa35.69■■■■□ 3.3
ME3-209ENST00000530520 PPLO60437 1756 aa35.69■■■■□ 3.3
ME3-209ENST00000530520 DCAF11Q8TEB1 546 aa35.66■■■■□ 3.3
ME3-209ENST00000530520 NEXMIFQ5QGS0 1516 aa35.65■■■■□ 3.3
ME3-209ENST00000530520 THEMISQ8N1K5 641 aaPredicted RBP35.65■■■■□ 3.3
ME3-209ENST00000530520 ZEB1P37275 1124 aaPredicted RBP35.64■■■■□ 3.3
ME3-209ENST00000530520 RPGRIP1LQ68CZ1 1315 aa35.64■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms