RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 ZNF335Q9H4Z2 1342 aaPredicted RBP10.01□□□□□ -0.81
CHRNA6-202ENST00000529467 MTUS2Q5JR59 1369 aa10.01□□□□□ -0.81
CHRNA6-202ENST00000529467 PLA2R1Q13018 1463 aa10□□□□□ -0.81
CHRNA6-202ENST00000529467 MBD5Q9P267 1494 aa10□□□□□ -0.81
CHRNA6-202ENST00000529467 ZNF142P52746 1687 aaPredicted RBP9.99□□□□□ -0.81
CHRNA6-202ENST00000529467 ADGBQ8N7X0 1667 aa9.99□□□□□ -0.81
CHRNA6-202ENST00000529467 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
CHRNA6-202ENST00000529467 CEP170BQ9Y4F5 1589 aaPredicted RBP9.98□□□□□ -0.81
CHRNA6-202ENST00000529467 MYO3AQ8NEV4 1616 aa9.98□□□□□ -0.81
CHRNA6-202ENST00000529467 DHX29Q7Z478 1369 aaKnown RBP9.98□□□□□ -0.81
CHRNA6-202ENST00000529467 RTEL1-TNFRSF6BF6WH68 1400 aa9.98□□□□□ -0.81
CHRNA6-202ENST00000529467 TIAM1Q13009 1591 aa9.97□□□□□ -0.81
CHRNA6-202ENST00000529467 UBAP1LF5GYI3 381 aa9.96□□□□□ -0.82
CHRNA6-202ENST00000529467 FBXO31Q5XUX0 539 aaPredicted RBP9.96□□□□□ -0.82
CHRNA6-202ENST00000529467 CEP162Q5TB80 1403 aa9.96□□□□□ -0.82
CHRNA6-202ENST00000529467 A2ML1A8K2U0 1454 aa9.96□□□□□ -0.82
CHRNA6-202ENST00000529467 SPATA31D1Q6ZQQ2 1576 aa9.96□□□□□ -0.82
CHRNA6-202ENST00000529467 KIF3BO15066 747 aa9.95□□□□□ -0.82
CHRNA6-202ENST00000529467 RSPH4AQ5TD94 716 aa9.95□□□□□ -0.82
CHRNA6-202ENST00000529467 DNMT1P26358 1616 aaKnown RBP9.95□□□□□ -0.82
CHRNA6-202ENST00000529467 EHBP1L1Q8N3D4 1523 aa9.94□□□□□ -0.82
CHRNA6-202ENST00000529467 TNRQ92752 1358 aa9.92□□□□□ -0.82
CHRNA6-202ENST00000529467 WASHC2CQ9Y4E1 1318 aa9.92□□□□□ -0.82
CHRNA6-202ENST00000529467 PZPP20742 1482 aa9.91□□□□□ -0.82
CHRNA6-202ENST00000529467 NCOA2Q15596 1464 aa9.91□□□□□ -0.82
CHRNA6-202ENST00000529467 CCDC141Q6ZP82 1450 aa9.91□□□□□ -0.82
CHRNA6-202ENST00000529467 MIA2Q96PC5 1412 aa9.9□□□□□ -0.82
CHRNA6-202ENST00000529467 NEURL4Q96JN8 1562 aa9.9□□□□□ -0.82
CHRNA6-202ENST00000529467 ANKLE2Q86XL3 938 aa9.9□□□□□ -0.82
CHRNA6-202ENST00000529467 THEMISQ8N1K5 641 aaPredicted RBP9.9□□□□□ -0.82
CHRNA6-202ENST00000529467 CAMSAP2Q08AD1 1489 aa9.9□□□□□ -0.83
CHRNA6-202ENST00000529467 POLR1AO95602 1720 aaPredicted RBP9.9□□□□□ -0.83
CHRNA6-202ENST00000529467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHRNA6-202ENST00000529467 KDM5DQ9BY66 1539 aa9.89□□□□□ -0.83
CHRNA6-202ENST00000529467 FAM135AQ9P2D6 1515 aa9.89□□□□□ -0.83
CHRNA6-202ENST00000529467 TOM1O60784 492 aa9.89□□□□□ -0.83
CHRNA6-202ENST00000529467 TSPY4P0CV99 314 aa9.89□□□□□ -0.83
CHRNA6-202ENST00000529467 TSPY10P0CW01 314 aa9.89□□□□□ -0.83
CHRNA6-202ENST00000529467 SHANK2Q9UPX8 1470 aa9.89□□□□□ -0.83
CHRNA6-202ENST00000529467 CPS1P31327 1500 aa9.88□□□□□ -0.83
CHRNA6-202ENST00000529467 HSPA1LP34931 641 aa9.88□□□□□ -0.83
CHRNA6-202ENST00000529467 ARHGEF5Q12774 1597 aa9.88□□□□□ -0.83
CHRNA6-202ENST00000529467 PIP4K2BP78356 416 aa9.87□□□□□ -0.83
CHRNA6-202ENST00000529467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.87□□□□□ -0.83
CHRNA6-202ENST00000529467 MED14O60244 1454 aa9.86□□□□□ -0.83
CHRNA6-202ENST00000529467 NLRP1Q9C000 1473 aa9.86□□□□□ -0.83
CHRNA6-202ENST00000529467 UGGT1Q9NYU2 1555 aa9.86□□□□□ -0.83
CHRNA6-202ENST00000529467 CFAP65Q6ZU64 1925 aaKnown RBP9.86□□□□□ -0.83
CHRNA6-202ENST00000529467 VWDEQ8N2E2 1590 aa9.85□□□□□ -0.83
CHRNA6-202ENST00000529467 NPHP4O75161 1426 aaPredicted RBP9.85□□□□□ -0.83
CHRNA6-202ENST00000529467 DEPDC5O75140 1603 aa9.85□□□□□ -0.83
CHRNA6-202ENST00000529467 KANK4Q5T7N3 995 aaPredicted RBP9.84□□□□□ -0.83
CHRNA6-202ENST00000529467 LRRC9Q6ZRR7 1453 aa9.84□□□□□ -0.83
CHRNA6-202ENST00000529467 RNF17Q9BXT8 1623 aaKnown RBP9.83□□□□□ -0.84
CHRNA6-202ENST00000529467 ALKQ9UM73 1620 aa9.83□□□□□ -0.84
CHRNA6-202ENST00000529467 MAST1Q9Y2H9 1570 aa9.83□□□□□ -0.84
CHRNA6-202ENST00000529467 STRCP1A6NGW2 1772 aa9.83□□□□□ -0.84
CHRNA6-202ENST00000529467 ABCC3O15438 1527 aa9.82□□□□□ -0.84
CHRNA6-202ENST00000529467 LOC105371045A0A1W2PR82 267 aa9.82□□□□□ -0.84
CHRNA6-202ENST00000529467 IQGAP1P46940 1657 aa9.81□□□□□ -0.84
CHRNA6-202ENST00000529467 MED1Q15648 1581 aaPredicted RBP9.81□□□□□ -0.84
CHRNA6-202ENST00000529467 VPS8Q8N3P4 1428 aa9.81□□□□□ -0.84
CHRNA6-202ENST00000529467 ZC3H13Q5T200 1668 aaKnown RBP9.8□□□□□ -0.84
CHRNA6-202ENST00000529467 ERVK-7P63135 1459 aa9.8□□□□□ -0.84
CHRNA6-202ENST00000529467 MROH1Q8NDA8 1641 aa9.8□□□□□ -0.84
CHRNA6-202ENST00000529467 EIF2AK4Q9P2K8 1649 aaKnown RBP9.8□□□□□ -0.84
CHRNA6-202ENST00000529467 LRRC7Q96NW7 1537 aa9.8□□□□□ -0.84
CHRNA6-202ENST00000529467 MAP3K1Q13233 1512 aa9.79□□□□□ -0.84
CHRNA6-202ENST00000529467 LTKP29376 864 aa9.79□□□□□ -0.84
CHRNA6-202ENST00000529467 MYOM3Q5VTT5 1437 aa9.79□□□□□ -0.84
CHRNA6-202ENST00000529467 CEP152O94986 1710 aa9.79□□□□□ -0.84
CHRNA6-202ENST00000529467 UBR1Q8IWV7 1749 aa9.79□□□□□ -0.84
CHRNA6-202ENST00000529467 TXNDC2Q86VQ3 553 aa9.78□□□□□ -0.84
CHRNA6-202ENST00000529467 DUOX2Q9NRD8 1548 aa9.77□□□□□ -0.84
CHRNA6-202ENST00000529467 ARHGAP31Q2M1Z3 1444 aa9.77□□□□□ -0.85
CHRNA6-202ENST00000529467 ARHGAP23Q9P227 1491 aa9.77□□□□□ -0.85
CHRNA6-202ENST00000529467 RRP7BPQ9NSQ0 103 aa9.76□□□□□ -0.85
CHRNA6-202ENST00000529467 SCAF11Q99590 1463 aaKnown RBP9.76□□□□□ -0.85
CHRNA6-202ENST00000529467 SLIT1O75093 1534 aa9.76□□□□□ -0.85
CHRNA6-202ENST00000529467 ABCC5O15440 1437 aa9.75□□□□□ -0.85
CHRNA6-202ENST00000529467 KCNA4P22459 653 aa9.75□□□□□ -0.85
CHRNA6-202ENST00000529467 SYNMO15061 1565 aa9.75□□□□□ -0.85
CHRNA6-202ENST00000529467 XIRP1Q702N8 1843 aaKnown RBP9.75□□□□□ -0.85
CHRNA6-202ENST00000529467 KIF15Q9NS87 1388 aa9.75□□□□□ -0.85
CHRNA6-202ENST00000529467 EID1Q9Y6B2 187 aa9.74□□□□□ -0.85
CHRNA6-202ENST00000529467 U3KPZ7 1027 aaPredicted RBP9.74□□□□□ -0.85
CHRNA6-202ENST00000529467 ERBINQ96RT1 1412 aa9.73□□□□□ -0.85
CHRNA6-202ENST00000529467 PRDM15P57071 1507 aaPredicted RBP9.73□□□□□ -0.85
CHRNA6-202ENST00000529467 IDI1Q13907 227 aa9.73□□□□□ -0.85
CHRNA6-202ENST00000529467 RGS17Q9UGC6 210 aaPredicted RBP9.73□□□□□ -0.85
CHRNA6-202ENST00000529467 TMEM2Q9UHN6 1383 aa9.72□□□□□ -0.85
CHRNA6-202ENST00000529467 PIK3C2BO00750 1634 aa9.71□□□□□ -0.85
CHRNA6-202ENST00000529467 PTPN23Q9H3S7 1636 aa9.71□□□□□ -0.85
CHRNA6-202ENST00000529467 CROCC2H7BZ55 1655 aa9.71□□□□□ -0.85
CHRNA6-202ENST00000529467 STAG3Q9UJ98 1225 aa9.71□□□□□ -0.86
CHRNA6-202ENST00000529467 DAPK1P53355 1430 aa9.71□□□□□ -0.86
CHRNA6-202ENST00000529467 KCNA6P17658 529 aa9.7□□□□□ -0.86
CHRNA6-202ENST00000529467 CHIC2Q9UKJ5 165 aa9.7□□□□□ -0.86
CHRNA6-202ENST00000529467 KANK1Q14678 1352 aa9.7□□□□□ -0.86
CHRNA6-202ENST00000529467 FAM135BQ49AJ0 1406 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms