RNA–Protein interactions for RNA: ENST00000528824.1

SNX7-204, Transcript of sorting nexin 7, humanhuman

TSL 1 (best)

Gene SNX7, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-204ENST00000528824 ARHGAP35Q9NRY4 1499 aa12.57□□□□□ -0.4
SNX7-204ENST00000528824 PTPRKQ15262 1439 aa12.57□□□□□ -0.4
SNX7-204ENST00000528824 KIDINS220Q9ULH0 1771 aa12.57□□□□□ -0.4
SNX7-204ENST00000528824 SUPT6HQ7KZ85 1726 aaKnown RBP12.57□□□□□ -0.4
SNX7-204ENST00000528824 CEP170BQ9Y4F5 1589 aaPredicted RBP12.56□□□□□ -0.4
SNX7-204ENST00000528824 PLEKHH2Q8IVE3 1493 aa12.56□□□□□ -0.4
SNX7-204ENST00000528824 ZNF142P52746 1687 aaPredicted RBP12.56□□□□□ -0.4
SNX7-204ENST00000528824 MED1Q15648 1581 aaPredicted RBP12.55□□□□□ -0.4
SNX7-204ENST00000528824 MYO3AQ8NEV4 1616 aa12.54□□□□□ -0.4
SNX7-204ENST00000528824 SAMD9LQ8IVG5 1584 aa12.54□□□□□ -0.4
SNX7-204ENST00000528824 A2MP01023 1474 aa12.53□□□□□ -0.4
SNX7-204ENST00000528824 ANKLE2Q86XL3 938 aa12.53□□□□□ -0.4
SNX7-204ENST00000528824 KIAA1107Q9UPP5 1409 aa12.53□□□□□ -0.4
SNX7-204ENST00000528824 A2ML1A8K2U0 1454 aa12.53□□□□□ -0.4
SNX7-204ENST00000528824 THEMISQ8N1K5 641 aaPredicted RBP12.52□□□□□ -0.4
SNX7-204ENST00000528824 CFDP1Q9UEE9 299 aaPredicted RBP12.52□□□□□ -0.4
SNX7-204ENST00000528824 CASKIN1Q8WXD9 1431 aa12.52□□□□□ -0.41
SNX7-204ENST00000528824 DSG3P32926 999 aa12.52□□□□□ -0.41
SNX7-204ENST00000528824 HNRNPMP52272 730 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNX7-204ENST00000528824 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.41
SNX7-204ENST00000528824 CLTCQ00610 1675 aaKnown RBP12.52□□□□□ -0.41
SNX7-204ENST00000528824 SHANK2Q9UPX8 1470 aa12.51□□□□□ -0.41
SNX7-204ENST00000528824 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
SNX7-204ENST00000528824 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
SNX7-204ENST00000528824 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
SNX7-204ENST00000528824 SYCP2Q9BX26 1530 aa12.49□□□□□ -0.41
SNX7-204ENST00000528824 CCNB3Q8WWL7 1395 aa12.48□□□□□ -0.41
SNX7-204ENST00000528824 TNRQ92752 1358 aa12.48□□□□□ -0.41
SNX7-204ENST00000528824 CDC42BPAQ5VT25 1732 aa12.48□□□□□ -0.41
SNX7-204ENST00000528824 PLXNC1O60486 1568 aa12.47□□□□□ -0.41
SNX7-204ENST00000528824 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
SNX7-204ENST00000528824 DNMT1P26358 1616 aaKnown RBP12.46□□□□□ -0.41
SNX7-204ENST00000528824 FYCO1Q9BQS8 1478 aa12.45□□□□□ -0.42
SNX7-204ENST00000528824 WASHC2CQ9Y4E1 1318 aa12.45□□□□□ -0.42
SNX7-204ENST00000528824 ADGBQ8N7X0 1667 aa12.45□□□□□ -0.42
SNX7-204ENST00000528824 FAM135AQ9P2D6 1515 aa12.45□□□□□ -0.42
SNX7-204ENST00000528824 POLR1AO95602 1720 aaPredicted RBP12.45□□□□□ -0.42
SNX7-204ENST00000528824 INO80Q9ULG1 1556 aaPredicted RBP12.44□□□□□ -0.42
SNX7-204ENST00000528824 RTEL1-TNFRSF6BF6WH68 1400 aa12.44□□□□□ -0.42
SNX7-204ENST00000528824 ABCB7O75027 752 aa12.44□□□□□ -0.42
SNX7-204ENST00000528824 RSPH4AQ5TD94 716 aa12.43□□□□□ -0.42
SNX7-204ENST00000528824 LRRIQ1Q96JM4 1722 aa12.43□□□□□ -0.42
SNX7-204ENST00000528824 DHX29Q7Z478 1369 aaKnown RBP12.43□□□□□ -0.42
SNX7-204ENST00000528824 NLRP1Q9C000 1473 aa12.43□□□□□ -0.42
SNX7-204ENST00000528824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNX7-204ENST00000528824 NPHP4O75161 1426 aaPredicted RBP12.42□□□□□ -0.42
SNX7-204ENST00000528824 KIF3BO15066 747 aa12.42□□□□□ -0.42
SNX7-204ENST00000528824 MTUS2Q5JR59 1369 aa12.42□□□□□ -0.42
SNX7-204ENST00000528824 PZPP20742 1482 aa12.41□□□□□ -0.42
SNX7-204ENST00000528824 MED14O60244 1454 aa12.41□□□□□ -0.42
SNX7-204ENST00000528824 MIA2Q96PC5 1412 aa12.4□□□□□ -0.42
SNX7-204ENST00000528824 KDM5DQ9BY66 1539 aa12.4□□□□□ -0.42
SNX7-204ENST00000528824 UGGT1Q9NYU2 1555 aa12.4□□□□□ -0.42
SNX7-204ENST00000528824 FBXO31Q5XUX0 539 aaPredicted RBP12.39□□□□□ -0.43
SNX7-204ENST00000528824 DEPDC5O75140 1603 aa12.39□□□□□ -0.43
SNX7-204ENST00000528824 ATXN8OSP0DMR3 200 aa12.39□□□□□ -0.43
SNX7-204ENST00000528824 NEURL4Q96JN8 1562 aa12.39□□□□□ -0.43
SNX7-204ENST00000528824 VWDEQ8N2E2 1590 aa12.37□□□□□ -0.43
SNX7-204ENST00000528824 TSPY4P0CV99 314 aa12.36□□□□□ -0.43
SNX7-204ENST00000528824 TSPY10P0CW01 314 aa12.36□□□□□ -0.43
SNX7-204ENST00000528824 RNF17Q9BXT8 1623 aaKnown RBP12.36□□□□□ -0.43
SNX7-204ENST00000528824 SYNMO15061 1565 aa12.36□□□□□ -0.43
SNX7-204ENST00000528824 IQGAP1P46940 1657 aa12.34□□□□□ -0.43
SNX7-204ENST00000528824 LRRC7Q96NW7 1537 aa12.34□□□□□ -0.43
SNX7-204ENST00000528824 EID1Q9Y6B2 187 aa12.34□□□□□ -0.43
SNX7-204ENST00000528824 MBD5Q9P267 1494 aa12.33□□□□□ -0.44
SNX7-204ENST00000528824 CCDC141Q6ZP82 1450 aa12.32□□□□□ -0.44
SNX7-204ENST00000528824 PLSCR2Q9NRY7 297 aa12.32□□□□□ -0.44
SNX7-204ENST00000528824 ZNF644Q9H582 1327 aaPredicted RBP12.31□□□□□ -0.44
SNX7-204ENST00000528824 POLA2Q14181 598 aa12.3□□□□□ -0.44
SNX7-204ENST00000528824 RGS17Q9UGC6 210 aaPredicted RBP12.3□□□□□ -0.44
SNX7-204ENST00000528824 FAM135BQ49AJ0 1406 aa12.29□□□□□ -0.44
SNX7-204ENST00000528824 EHBP1L1Q8N3D4 1523 aa12.29□□□□□ -0.44
SNX7-204ENST00000528824 TXNDC2Q86VQ3 553 aa12.29□□□□□ -0.44
SNX7-204ENST00000528824 CEP162Q5TB80 1403 aa12.28□□□□□ -0.44
SNX7-204ENST00000528824 ALKQ9UM73 1620 aa12.28□□□□□ -0.44
SNX7-204ENST00000528824 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.44
SNX7-204ENST00000528824 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.44
SNX7-204ENST00000528824 TIAM1Q13009 1591 aa12.27□□□□□ -0.45
SNX7-204ENST00000528824 ZC3H13Q5T200 1668 aaKnown RBP12.26□□□□□ -0.45
SNX7-204ENST00000528824 POTEAQ6S8J7 498 aa12.25□□□□□ -0.45
SNX7-204ENST00000528824 ERVK-7P63135 1459 aa12.24□□□□□ -0.45
SNX7-204ENST00000528824 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
SNX7-204ENST00000528824 CAMSAP2Q08AD1 1489 aa12.23□□□□□ -0.45
SNX7-204ENST00000528824 ABCC3O15438 1527 aa12.22□□□□□ -0.45
SNX7-204ENST00000528824 KCNA6P17658 529 aa12.22□□□□□ -0.45
SNX7-204ENST00000528824 ZNF772Q68DY9 489 aaPredicted RBP12.22□□□□□ -0.45
SNX7-204ENST00000528824 PROSER2Q86WR7 435 aaPredicted RBP12.22□□□□□ -0.45
SNX7-204ENST00000528824 STRCP1A6NGW2 1772 aa12.21□□□□□ -0.45
SNX7-204ENST00000528824 SLIT1O75093 1534 aa12.21□□□□□ -0.45
SNX7-204ENST00000528824 ARHGEF5Q12774 1597 aa12.21□□□□□ -0.46
SNX7-204ENST00000528824 JCADQ9P266 1359 aa12.21□□□□□ -0.46
SNX7-204ENST00000528824 LTKP29376 864 aa12.2□□□□□ -0.46
SNX7-204ENST00000528824 MSH6P52701 1360 aa12.2□□□□□ -0.46
SNX7-204ENST00000528824 TMEM94Q12767 1356 aa12.2□□□□□ -0.46
SNX7-204ENST00000528824 ARHGAP23Q9P227 1491 aa12.2□□□□□ -0.46
SNX7-204ENST00000528824 EIF2AK4Q9P2K8 1649 aaKnown RBP12.2□□□□□ -0.46
SNX7-204ENST00000528824 MEX3CQ5U5Q3 659 aaKnown RBP12.19□□□□□ -0.46
SNX7-204ENST00000528824 HDGFP51858 240 aaKnown RBP12.18□□□□□ -0.46
SNX7-204ENST00000528824 BCANQ96GW7 911 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms