RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 DEPDC5O75140 1603 aa32.76■■■□□ 2.84
PACSIN3-205ENST00000528462 UNC13BO14795 1591 aa32.75■■■□□ 2.83
PACSIN3-205ENST00000528462 PRDM15P57071 1507 aaPredicted RBP32.71■■■□□ 2.83
PACSIN3-205ENST00000528462 MROH1Q8NDA8 1641 aa32.7■■■□□ 2.83
PACSIN3-205ENST00000528462 PPP6R1Q9UPN7 881 aa32.69■■■□□ 2.82
PACSIN3-205ENST00000528462 KDM5DQ9BY66 1539 aa32.68■■■□□ 2.82
PACSIN3-205ENST00000528462 ARID4BQ4LE39 1312 aaPredicted RBP32.67■■■□□ 2.82
PACSIN3-205ENST00000528462 NUP155O75694 1391 aa32.66■■■□□ 2.82
PACSIN3-205ENST00000528462 GGT6Q6P531 493 aa32.66■■■□□ 2.82
PACSIN3-205ENST00000528462 VWDEQ8N2E2 1590 aa32.66■■■□□ 2.82
PACSIN3-205ENST00000528462 FAM135AQ9P2D6 1515 aa32.64■■■□□ 2.82
PACSIN3-205ENST00000528462 KANK1Q14678 1352 aa32.64■■■□□ 2.82
PACSIN3-205ENST00000528462 TRIM52Q96A61 297 aa32.63■■■□□ 2.81
PACSIN3-205ENST00000528462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.62■■■□□ 2.812e-6■□□□□ 10.8
PACSIN3-205ENST00000528462 IQGAP3Q86VI3 1631 aa32.61■■■□□ 2.81
PACSIN3-205ENST00000528462 PZPP20742 1482 aa32.58■■■□□ 2.81
PACSIN3-205ENST00000528462 LMTK2Q8IWU2 1503 aa32.58■■■□□ 2.81
PACSIN3-205ENST00000528462 WASHC2CQ9Y4E1 1318 aa32.55■■■□□ 2.8
PACSIN3-205ENST00000528462 ABCC3O15438 1527 aa32.54■■■□□ 2.8
PACSIN3-205ENST00000528462 ZC3H13Q5T200 1668 aaKnown RBP32.54■■■□□ 2.8
PACSIN3-205ENST00000528462 MLECQ14165 292 aa32.53■■■□□ 2.8
PACSIN3-205ENST00000528462 MPHOSPH9Q99550 1183 aa32.53■■■□□ 2.8
PACSIN3-205ENST00000528462 SLC4A1APQ9BWU0 796 aaKnown RBP32.52■■■□□ 2.8
PACSIN3-205ENST00000528462 CNTLNQ9NXG0 1405 aa32.49■■■□□ 2.79
PACSIN3-205ENST00000528462 TET3O43151 1660 aa32.47■■■□□ 2.79
PACSIN3-205ENST00000528462 DHX57Q6P158 1386 aaKnown RBP32.47■■■□□ 2.79
PACSIN3-205ENST00000528462 CEP152O94986 1710 aa32.44■■■□□ 2.78
PACSIN3-205ENST00000528462 ARHGAP31Q2M1Z3 1444 aa32.44■■■□□ 2.78
PACSIN3-205ENST00000528462 EFCAB6Q5THR3 1501 aa32.44■■■□□ 2.78
PACSIN3-205ENST00000528462 ESF1Q9H501 851 aaKnown RBP32.44■■■□□ 2.78
PACSIN3-205ENST00000528462 ADAMTSL3P82987 1691 aa32.44■■■□□ 2.78
PACSIN3-205ENST00000528462 PKD2Q13563 968 aa32.41■■■□□ 2.78
PACSIN3-205ENST00000528462 RPRD2Q5VT52 1461 aaKnown RBP32.41■■■□□ 2.78
PACSIN3-205ENST00000528462 CAMSAP1Q5T5Y3 1602 aa32.4■■■□□ 2.78
PACSIN3-205ENST00000528462 CLTCQ00610 1675 aaKnown RBP32.39■■■□□ 2.78
PACSIN3-205ENST00000528462 MROH2AA6NES4 1674 aa32.38■■■□□ 2.77
PACSIN3-205ENST00000528462 FER1L4A9Z1Z3 1794 aa32.38■■■□□ 2.77
PACSIN3-205ENST00000528462 NPATQ14207 1427 aa32.38■■■□□ 2.77
PACSIN3-205ENST00000528462 ZMYM3Q14202 1370 aa32.36■■■□□ 2.77
PACSIN3-205ENST00000528462 E9PCH4 1651 aa32.35■■■□□ 2.77
PACSIN3-205ENST00000528462 MADDQ8WXG6 1647 aa32.35■■■□□ 2.77
PACSIN3-205ENST00000528462 CLSPNQ9HAW4 1339 aa32.3■■■□□ 2.76
PACSIN3-205ENST00000528462 PTPRTO14522 1441 aa32.29■■■□□ 2.76
PACSIN3-205ENST00000528462 ANKRD30BQ9BXX2 1392 aa32.28■■■□□ 2.76
PACSIN3-205ENST00000528462 FOXD1Q16676 465 aa32.28■■■□□ 2.76
PACSIN3-205ENST00000528462 NOS1P29475 1434 aa32.25■■■□□ 2.75
PACSIN3-205ENST00000528462 CCER1Q8TC90 406 aaPredicted RBP32.25■■■□□ 2.75
PACSIN3-205ENST00000528462 PLA2R1Q13018 1463 aa32.24■■■□□ 2.75
PACSIN3-205ENST00000528462 RIMS1Q86UR5 1692 aaKnown RBP32.24■■■□□ 2.75
PACSIN3-205ENST00000528462 ERVK-7P63135 1459 aa32.22■■■□□ 2.75
PACSIN3-205ENST00000528462 C3P01024 1663 aa32.21■■■□□ 2.75
PACSIN3-205ENST00000528462 SPATA31D1Q6ZQQ2 1576 aa32.2■■■□□ 2.75
PACSIN3-205ENST00000528462 TRPM2O94759 1503 aa32.2■■■□□ 2.74
PACSIN3-205ENST00000528462 KDM4FA0A1W2PPD8 638 aa32.19■■■□□ 2.74
PACSIN3-205ENST00000528462 SPHKAPQ2M3C7 1700 aa32.19■■■□□ 2.74
PACSIN3-205ENST00000528462 PREX1Q8TCU6 1659 aa32.19■■■□□ 2.74
PACSIN3-205ENST00000528462 FBXO31Q5XUX0 539 aaPredicted RBP32.19■■■□□ 2.74
PACSIN3-205ENST00000528462 PTPRMP28827 1452 aa32.18■■■□□ 2.74
PACSIN3-205ENST00000528462 CEBPAP49715 358 aaPredicted RBP32.15■■■□□ 2.74
PACSIN3-205ENST00000528462 CFAP65Q6ZU64 1925 aaKnown RBP32.13■■■□□ 2.73
PACSIN3-205ENST00000528462 SYNMO15061 1565 aa32.12■■■□□ 2.73
PACSIN3-205ENST00000528462 CCDC144AA2RUR9 1427 aa32.12■■■□□ 2.73
PACSIN3-205ENST00000528462 SLC52A1Q9NWF4 448 aa32.11■■■□□ 2.73
PACSIN3-205ENST00000528462 TNRQ92752 1358 aa32.09■■■□□ 2.73
PACSIN3-205ENST00000528462 PIK3C2BO00750 1634 aa32.07■■■□□ 2.72
PACSIN3-205ENST00000528462 CLTCL1P53675 1640 aa32.04■■■□□ 2.72
PACSIN3-205ENST00000528462 SETD1BQ9UPS6 1966 aaKnown RBP32.03■■■□□ 2.72
PACSIN3-205ENST00000528462 NLRP1Q9C000 1473 aa32.02■■■□□ 2.72
PACSIN3-205ENST00000528462 UGGT1Q9NYU2 1555 aa32.02■■■□□ 2.72
PACSIN3-205ENST00000528462 IDI1Q13907 227 aa32.02■■■□□ 2.72
PACSIN3-205ENST00000528462 SIN3AQ96ST3 1273 aa32.02■■■□□ 2.72
PACSIN3-205ENST00000528462 NEURL4Q96JN8 1562 aa31.99■■■□□ 2.71
PACSIN3-205ENST00000528462 PLPPR3Q6T4P5 718 aa31.97■■■□□ 2.71
PACSIN3-205ENST00000528462 SPATA31E1Q6ZUB1 1445 aa31.95■■■□□ 2.71
PACSIN3-205ENST00000528462 NEUROD1Q13562 356 aa31.93■■■□□ 2.7
PACSIN3-205ENST00000528462 ADGRB3O60242 1522 aa31.91■■■□□ 2.7
PACSIN3-205ENST00000528462 TIMELESSQ9UNS1 1208 aa31.91■■■□□ 2.7
PACSIN3-205ENST00000528462 MYO3AQ8NEV4 1616 aa31.91■■■□□ 2.7
PACSIN3-205ENST00000528462 KDM5AP29375 1690 aaKnown RBP31.91■■■□□ 2.7
PACSIN3-205ENST00000528462 KIF1BO60333 1816 aa31.9■■■□□ 2.7
PACSIN3-205ENST00000528462 A2ML1A8K2U0 1454 aa31.89■■■□□ 2.7
PACSIN3-205ENST00000528462 TMEM131LA2VDJ0 1609 aa31.89■■■□□ 2.69
PACSIN3-205ENST00000528462 UHRF1BP1Q6BDS2 1440 aa31.85■■■□□ 2.69
PACSIN3-205ENST00000528462 CEP170BQ9Y4F5 1589 aaPredicted RBP31.84■■■□□ 2.69
PACSIN3-205ENST00000528462 ZNF142P52746 1687 aaPredicted RBP31.84■■■□□ 2.69
PACSIN3-205ENST00000528462 STAG3Q9UJ98 1225 aa31.82■■■□□ 2.68
PACSIN3-205ENST00000528462 TONSLQ96HA7 1378 aa31.82■■■□□ 2.68
PACSIN3-205ENST00000528462 CHGAP10645 457 aaKnown RBP31.81■■■□□ 2.68
PACSIN3-205ENST00000528462 UBR1Q8IWV7 1749 aa31.81■■■□□ 2.68
PACSIN3-205ENST00000528462 RPGRIP1LQ68CZ1 1315 aa31.8■■■□□ 2.68
PACSIN3-205ENST00000528462 RGL3Q3MIN7 710 aa31.79■■■□□ 2.68
PACSIN3-205ENST00000528462 THEMISQ8N1K5 641 aaPredicted RBP31.78■■■□□ 2.68
PACSIN3-205ENST00000528462 L3MBTL2Q969R5 705 aa31.78■■■□□ 2.68
PACSIN3-205ENST00000528462 STAC3Q96MF2 364 aa31.78■■■□□ 2.68
PACSIN3-205ENST00000528462 ZNF326Q5BKZ1 582 aaKnown RBP31.74■■■□□ 2.67
PACSIN3-205ENST00000528462 MYO5BQ9ULV0 1848 aa31.74■■■□□ 2.67
PACSIN3-205ENST00000528462 TMEM2Q9UHN6 1383 aa31.73■■■□□ 2.67
PACSIN3-205ENST00000528462 SLIT1O75093 1534 aa31.72■■■□□ 2.67
PACSIN3-205ENST00000528462 ARHGAP23Q9P227 1491 aa31.71■■■□□ 2.67
PACSIN3-205ENST00000528462 ZFYVE9O95405 1425 aa31.7■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms