RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 ROCK1Q13464 1354 aa19.69■□□□□ 0.74
SCN3B-205ENST00000528267 C3P01024 1663 aa19.67■□□□□ 0.74
SCN3B-205ENST00000528267 GCC2Q8IWJ2 1684 aa19.66■□□□□ 0.74
SCN3B-205ENST00000528267 KIF3BO15066 747 aa19.66■□□□□ 0.74
SCN3B-205ENST00000528267 PRDM15P57071 1507 aaPredicted RBP19.66■□□□□ 0.74
SCN3B-205ENST00000528267 MROH2AA6NES4 1674 aa19.65■□□□□ 0.74
SCN3B-205ENST00000528267 CEP152O94986 1710 aa19.65■□□□□ 0.74
SCN3B-205ENST00000528267 GGT6Q6P531 493 aa19.64■□□□□ 0.73
SCN3B-205ENST00000528267 ANKRD50Q9ULJ7 1429 aa19.63■□□□□ 0.73
SCN3B-205ENST00000528267 UNC13BO14795 1591 aa19.61■□□□□ 0.73
SCN3B-205ENST00000528267 VWDEQ8N2E2 1590 aa19.61■□□□□ 0.73
SCN3B-205ENST00000528267 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
SCN3B-205ENST00000528267 NAIPQ13075 1403 aa19.61■□□□□ 0.73
SCN3B-205ENST00000528267 ABCC3O15438 1527 aa19.61■□□□□ 0.73
SCN3B-205ENST00000528267 ZC3H13Q5T200 1668 aaKnown RBP19.6■□□□□ 0.73
SCN3B-205ENST00000528267 FAM135AQ9P2D6 1515 aa19.58■□□□□ 0.73
SCN3B-205ENST00000528267 CEBPAP49715 358 aaPredicted RBP19.58■□□□□ 0.72
SCN3B-205ENST00000528267 CAMSAP1Q5T5Y3 1602 aa19.57■□□□□ 0.72
SCN3B-205ENST00000528267 HFM1A2PYH4 1435 aa19.57■□□□□ 0.72
SCN3B-205ENST00000528267 CNTLNQ9NXG0 1405 aa19.57■□□□□ 0.72
SCN3B-205ENST00000528267 ZMYM3Q14202 1370 aa19.54■□□□□ 0.72
SCN3B-205ENST00000528267 LMTK2Q8IWU2 1503 aa19.53■□□□□ 0.72
SCN3B-205ENST00000528267 PLPPR3Q6T4P5 718 aa19.53■□□□□ 0.72
SCN3B-205ENST00000528267 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
SCN3B-205ENST00000528267 IQGAP3Q86VI3 1631 aa19.51■□□□□ 0.71
SCN3B-205ENST00000528267 WASHC2CQ9Y4E1 1318 aa19.5■□□□□ 0.71
SCN3B-205ENST00000528267 PZPP20742 1482 aa19.49■□□□□ 0.71
SCN3B-205ENST00000528267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.49■□□□□ 0.71
SCN3B-205ENST00000528267 EFCAB6Q5THR3 1501 aa19.48■□□□□ 0.71
SCN3B-205ENST00000528267 CFAP65Q6ZU64 1925 aaKnown RBP19.48■□□□□ 0.71
SCN3B-205ENST00000528267 TET3O43151 1660 aa19.48■□□□□ 0.71
SCN3B-205ENST00000528267 PREX1Q8TCU6 1659 aa19.48■□□□□ 0.71
SCN3B-205ENST00000528267 NPATQ14207 1427 aa19.46■□□□□ 0.71
SCN3B-205ENST00000528267 ESF1Q9H501 851 aaKnown RBP19.46■□□□□ 0.71
SCN3B-205ENST00000528267 MYO3AQ8NEV4 1616 aa19.46■□□□□ 0.71
SCN3B-205ENST00000528267 LMTK3Q96Q04 1460 aa19.46■□□□□ 0.71
SCN3B-205ENST00000528267 E9PCH4 1651 aa19.46■□□□□ 0.71
SCN3B-205ENST00000528267 SPATA31D1Q6ZQQ2 1576 aa19.45■□□□□ 0.7
SCN3B-205ENST00000528267 FBXO31Q5XUX0 539 aaPredicted RBP19.45■□□□□ 0.7
SCN3B-205ENST00000528267 ARHGAP31Q2M1Z3 1444 aa19.44■□□□□ 0.7
SCN3B-205ENST00000528267 ERVK-7P63135 1459 aa19.43■□□□□ 0.7
SCN3B-205ENST00000528267 SETD1BQ9UPS6 1966 aaKnown RBP19.43■□□□□ 0.7
SCN3B-205ENST00000528267 KANK1Q14678 1352 aa19.42■□□□□ 0.7
SCN3B-205ENST00000528267 ZNF142P52746 1687 aaPredicted RBP19.41■□□□□ 0.7
SCN3B-205ENST00000528267 NUP155O75694 1391 aa19.41■□□□□ 0.7
SCN3B-205ENST00000528267 SETD5Q9C0A6 1442 aa19.41■□□□□ 0.7
SCN3B-205ENST00000528267 SYNMO15061 1565 aa19.4■□□□□ 0.7
SCN3B-205ENST00000528267 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
SCN3B-205ENST00000528267 CEP170BQ9Y4F5 1589 aaPredicted RBP19.36■□□□□ 0.69
SCN3B-205ENST00000528267 NOS1P29475 1434 aa19.36■□□□□ 0.69
SCN3B-205ENST00000528267 TNRQ92752 1358 aa19.36■□□□□ 0.69
SCN3B-205ENST00000528267 UHRF1BP1Q6BDS2 1440 aa19.34■□□□□ 0.69
SCN3B-205ENST00000528267 RPRD2Q5VT52 1461 aaKnown RBP19.34■□□□□ 0.69
SCN3B-205ENST00000528267 UGGT1Q9NYU2 1555 aa19.32■□□□□ 0.68
SCN3B-205ENST00000528267 SPHKAPQ2M3C7 1700 aa19.32■□□□□ 0.68
SCN3B-205ENST00000528267 PIK3C2BO00750 1634 aa19.32■□□□□ 0.68
SCN3B-205ENST00000528267 HSPA2P54652 639 aa19.31■□□□□ 0.68
SCN3B-205ENST00000528267 A2ML1A8K2U0 1454 aa19.3■□□□□ 0.68
SCN3B-205ENST00000528267 UBR1Q8IWV7 1749 aa19.3■□□□□ 0.68
SCN3B-205ENST00000528267 STRCQ7RTU9 1775 aa19.29■□□□□ 0.68
SCN3B-205ENST00000528267 TRIM52Q96A61 297 aa19.29■□□□□ 0.68
SCN3B-205ENST00000528267 NLRP1Q9C000 1473 aa19.28■□□□□ 0.68
SCN3B-205ENST00000528267 PLA2R1Q13018 1463 aa19.28■□□□□ 0.68
SCN3B-205ENST00000528267 MYO5BQ9ULV0 1848 aa19.28■□□□□ 0.68
SCN3B-205ENST00000528267 TRIM26Q12899 539 aaPredicted RBP19.27■□□□□ 0.68
SCN3B-205ENST00000528267 PTPRTO14522 1441 aa19.26■□□□□ 0.67
SCN3B-205ENST00000528267 CLTCL1P53675 1640 aa19.24■□□□□ 0.67
SCN3B-205ENST00000528267 TRPM2O94759 1503 aa19.24■□□□□ 0.67
SCN3B-205ENST00000528267 FOXD1Q16676 465 aa19.23■□□□□ 0.67
SCN3B-205ENST00000528267 ADGRB3O60242 1522 aa19.22■□□□□ 0.67
SCN3B-205ENST00000528267 KDM5AP29375 1690 aaKnown RBP19.22■□□□□ 0.67
SCN3B-205ENST00000528267 PKD2Q13563 968 aa19.22■□□□□ 0.67
SCN3B-205ENST00000528267 IDI1Q13907 227 aa19.22■□□□□ 0.67
SCN3B-205ENST00000528267 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
SCN3B-205ENST00000528267 TMEM131LA2VDJ0 1609 aa19.22■□□□□ 0.67
SCN3B-205ENST00000528267 MPHOSPH9Q99550 1183 aa19.21■□□□□ 0.67
SCN3B-205ENST00000528267 NEURL4Q96JN8 1562 aa19.19■□□□□ 0.66
SCN3B-205ENST00000528267 HRCP23327 699 aa19.19■□□□□ 0.66
SCN3B-205ENST00000528267 POLR1AO95602 1720 aaPredicted RBP19.19■□□□□ 0.66
SCN3B-205ENST00000528267 ARHGAP23Q9P227 1491 aa19.16■□□□□ 0.66
SCN3B-205ENST00000528267 SLIT1O75093 1534 aa19.15■□□□□ 0.66
SCN3B-205ENST00000528267 ILDR1Q86SU0 546 aaPredicted RBP19.15■□□□□ 0.66
SCN3B-205ENST00000528267 SLC52A1Q9NWF4 448 aa19.14■□□□□ 0.65
SCN3B-205ENST00000528267 KIF1BO60333 1816 aa19.12■□□□□ 0.65
SCN3B-205ENST00000528267 NCKAP5LQ9HCH0 1330 aa19.12■□□□□ 0.65
SCN3B-205ENST00000528267 ZFYVE9O95405 1425 aa19.09■□□□□ 0.65
SCN3B-205ENST00000528267 TMEM2Q9UHN6 1383 aa19.09■□□□□ 0.65
SCN3B-205ENST00000528267 ACIN1Q9UKV3 1341 aaKnown RBP19.09■□□□□ 0.65
SCN3B-205ENST00000528267 THEMISQ8N1K5 641 aaPredicted RBP19.08■□□□□ 0.64
SCN3B-205ENST00000528267 ANKRD30BQ9BXX2 1392 aa19.07■□□□□ 0.64
SCN3B-205ENST00000528267 LTKP29376 864 aa19.07■□□□□ 0.64
SCN3B-205ENST00000528267 MED14O60244 1454 aa19.07■□□□□ 0.64
SCN3B-205ENST00000528267 IQGAP1P46940 1657 aa19.07■□□□□ 0.64
SCN3B-205ENST00000528267 NEXMIFQ5QGS0 1516 aa19.06■□□□□ 0.64
SCN3B-205ENST00000528267 PCGF6Q9BYE7 350 aa19.06■□□□□ 0.64
SCN3B-205ENST00000528267 SCAF11Q99590 1463 aaKnown RBP19.05■□□□□ 0.64
SCN3B-205ENST00000528267 IFT172Q9UG01 1749 aa19.05■□□□□ 0.64
SCN3B-205ENST00000528267 DHX57Q6P158 1386 aaKnown RBP19.05■□□□□ 0.64
SCN3B-205ENST00000528267 CCDC144AA2RUR9 1427 aa19.04■□□□□ 0.64
SCN3B-205ENST00000528267 SPATA31E1Q6ZUB1 1445 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms