RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 PCGF6Q9BYE7 350 aa24.71■■□□□ 1.55
CAPN1-205ENST00000526954 HRCP23327 699 aa24.7■■□□□ 1.54
CAPN1-205ENST00000526954 PPP6R1Q9UPN7 881 aa24.7■■□□□ 1.54
CAPN1-205ENST00000526954 PRDM15P57071 1507 aaPredicted RBP24.7■■□□□ 1.54
CAPN1-205ENST00000526954 RAB3GAP2Q9H2M9 1393 aa24.69■■□□□ 1.54
CAPN1-205ENST00000526954 ACIN1Q9UKV3 1341 aaKnown RBP24.69■■□□□ 1.54
CAPN1-205ENST00000526954 GGT6Q6P531 493 aa24.68■■□□□ 1.54
CAPN1-205ENST00000526954 FAM135AQ9P2D6 1515 aa24.67■■□□□ 1.54
CAPN1-205ENST00000526954 ADAMTSL3P82987 1691 aa24.66■■□□□ 1.54
CAPN1-205ENST00000526954 VWDEQ8N2E2 1590 aa24.66■■□□□ 1.54
CAPN1-205ENST00000526954 MLECQ14165 292 aa24.65■■□□□ 1.54
CAPN1-205ENST00000526954 KDM5DQ9BY66 1539 aa24.65■■□□□ 1.54
CAPN1-205ENST00000526954 KANK1Q14678 1352 aa24.63■■□□□ 1.53
CAPN1-205ENST00000526954 ZC3H13Q5T200 1668 aaKnown RBP24.62■■□□□ 1.53
CAPN1-205ENST00000526954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.62■■□□□ 1.532e-6■■■□□ 14.7
CAPN1-205ENST00000526954 IQGAP3Q86VI3 1631 aa24.61■■□□□ 1.53
CAPN1-205ENST00000526954 FER1L4A9Z1Z3 1794 aa24.61■■□□□ 1.53
CAPN1-205ENST00000526954 NUP155O75694 1391 aa24.6■■□□□ 1.53
CAPN1-205ENST00000526954 ABCC3O15438 1527 aa24.59■■□□□ 1.53
CAPN1-205ENST00000526954 LMTK2Q8IWU2 1503 aa24.59■■□□□ 1.53
CAPN1-205ENST00000526954 WASHC2CQ9Y4E1 1318 aa24.59■■□□□ 1.53
CAPN1-205ENST00000526954 CEP152O94986 1710 aa24.58■■□□□ 1.53
CAPN1-205ENST00000526954 MADDQ8WXG6 1647 aa24.58■■□□□ 1.53
CAPN1-205ENST00000526954 CLTCQ00610 1675 aaKnown RBP24.58■■□□□ 1.53
CAPN1-205ENST00000526954 CNTLNQ9NXG0 1405 aa24.58■■□□□ 1.53
CAPN1-205ENST00000526954 TRIM52Q96A61 297 aa24.57■■□□□ 1.52
CAPN1-205ENST00000526954 MROH2AA6NES4 1674 aa24.56■■□□□ 1.52
CAPN1-205ENST00000526954 ESF1Q9H501 851 aaKnown RBP24.55■■□□□ 1.52
CAPN1-205ENST00000526954 TET3O43151 1660 aa24.54■■□□□ 1.52
CAPN1-205ENST00000526954 PZPP20742 1482 aa24.53■■□□□ 1.52
CAPN1-205ENST00000526954 CAMSAP1Q5T5Y3 1602 aa24.53■■□□□ 1.52
CAPN1-205ENST00000526954 RIMS1Q86UR5 1692 aaKnown RBP24.52■■□□□ 1.52
CAPN1-205ENST00000526954 KDM4FA0A1W2PPD8 638 aa24.51■■□□□ 1.51
CAPN1-205ENST00000526954 EFCAB6Q5THR3 1501 aa24.5■■□□□ 1.51
CAPN1-205ENST00000526954 ZMYM3Q14202 1370 aa24.49■■□□□ 1.51
CAPN1-205ENST00000526954 ARHGAP31Q2M1Z3 1444 aa24.49■■□□□ 1.51
CAPN1-205ENST00000526954 MPHOSPH9Q99550 1183 aa24.47■■□□□ 1.51
CAPN1-205ENST00000526954 SLC4A1APQ9BWU0 796 aaKnown RBP24.47■■□□□ 1.51
CAPN1-205ENST00000526954 C3P01024 1663 aa24.46■■□□□ 1.51
CAPN1-205ENST00000526954 E9PCH4 1651 aa24.46■■□□□ 1.51
CAPN1-205ENST00000526954 RPRD2Q5VT52 1461 aaKnown RBP24.45■■□□□ 1.51
CAPN1-205ENST00000526954 PTPRMP28827 1452 aa24.44■■□□□ 1.5
CAPN1-205ENST00000526954 NPATQ14207 1427 aa24.44■■□□□ 1.5
CAPN1-205ENST00000526954 PKD2Q13563 968 aa24.41■■□□□ 1.5
CAPN1-205ENST00000526954 CFAP65Q6ZU64 1925 aaKnown RBP24.41■■□□□ 1.5
CAPN1-205ENST00000526954 PREX1Q8TCU6 1659 aa24.38■■□□□ 1.49
CAPN1-205ENST00000526954 CEBPAP49715 358 aaPredicted RBP24.37■■□□□ 1.49
CAPN1-205ENST00000526954 SPATA31D1Q6ZQQ2 1576 aa24.37■■□□□ 1.49
CAPN1-205ENST00000526954 ERVK-7P63135 1459 aa24.36■■□□□ 1.49
CAPN1-205ENST00000526954 NOS1P29475 1434 aa24.35■■□□□ 1.49
CAPN1-205ENST00000526954 DHX57Q6P158 1386 aaKnown RBP24.35■■□□□ 1.49
CAPN1-205ENST00000526954 FBXO31Q5XUX0 539 aaPredicted RBP24.34■■□□□ 1.49
CAPN1-205ENST00000526954 SPHKAPQ2M3C7 1700 aa24.34■■□□□ 1.49
CAPN1-205ENST00000526954 PTPRTO14522 1441 aa24.34■■□□□ 1.49
CAPN1-205ENST00000526954 SETD1BQ9UPS6 1966 aaKnown RBP24.33■■□□□ 1.49
CAPN1-205ENST00000526954 FOXD1Q16676 465 aa24.3■■□□□ 1.48
CAPN1-205ENST00000526954 PLA2R1Q13018 1463 aa24.29■■□□□ 1.48
CAPN1-205ENST00000526954 SYNMO15061 1565 aa24.29■■□□□ 1.48
CAPN1-205ENST00000526954 TRPM2O94759 1503 aa24.28■■□□□ 1.48
CAPN1-205ENST00000526954 TNRQ92752 1358 aa24.28■■□□□ 1.48
CAPN1-205ENST00000526954 PLPPR3Q6T4P5 718 aa24.27■■□□□ 1.48
CAPN1-205ENST00000526954 ANKRD30BQ9BXX2 1392 aa24.26■■□□□ 1.47
CAPN1-205ENST00000526954 PIK3C2BO00750 1634 aa24.24■■□□□ 1.47
CAPN1-205ENST00000526954 SLC52A1Q9NWF4 448 aa24.23■■□□□ 1.47
CAPN1-205ENST00000526954 MYO3AQ8NEV4 1616 aa24.21■■□□□ 1.47
CAPN1-205ENST00000526954 NLRP1Q9C000 1473 aa24.21■■□□□ 1.47
CAPN1-205ENST00000526954 CLTCL1P53675 1640 aa24.21■■□□□ 1.47
CAPN1-205ENST00000526954 UGGT1Q9NYU2 1555 aa24.18■■□□□ 1.46
CAPN1-205ENST00000526954 IDI1Q13907 227 aa24.18■■□□□ 1.46
CAPN1-205ENST00000526954 ZNF142P52746 1687 aaPredicted RBP24.17■■□□□ 1.46
CAPN1-205ENST00000526954 CCDC144AA2RUR9 1427 aa24.17■■□□□ 1.46
CAPN1-205ENST00000526954 KDM5AP29375 1690 aaKnown RBP24.16■■□□□ 1.46
CAPN1-205ENST00000526954 CLSPNQ9HAW4 1339 aa24.15■■□□□ 1.46
CAPN1-205ENST00000526954 KIF1BO60333 1816 aa24.15■■□□□ 1.46
CAPN1-205ENST00000526954 A2ML1A8K2U0 1454 aa24.15■■□□□ 1.46
CAPN1-205ENST00000526954 UHRF1BP1Q6BDS2 1440 aa24.15■■□□□ 1.46
CAPN1-205ENST00000526954 CEP170BQ9Y4F5 1589 aaPredicted RBP24.14■■□□□ 1.45
CAPN1-205ENST00000526954 TMEM131LA2VDJ0 1609 aa24.12■■□□□ 1.45
CAPN1-205ENST00000526954 UBR1Q8IWV7 1749 aa24.12■■□□□ 1.45
CAPN1-205ENST00000526954 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
CAPN1-205ENST00000526954 ADGRB3O60242 1522 aa24.1■■□□□ 1.45
CAPN1-205ENST00000526954 NEURL4Q96JN8 1562 aa24.1■■□□□ 1.45
CAPN1-205ENST00000526954 MYO5BQ9ULV0 1848 aa24.09■■□□□ 1.45
CAPN1-205ENST00000526954 SPATA31E1Q6ZUB1 1445 aa24.06■■□□□ 1.44
CAPN1-205ENST00000526954 LMTK3Q96Q04 1460 aa24.06■■□□□ 1.44
CAPN1-205ENST00000526954 SIN3AQ96ST3 1273 aa24.05■■□□□ 1.44
CAPN1-205ENST00000526954 STAG3Q9UJ98 1225 aa24.05■■□□□ 1.44
CAPN1-205ENST00000526954 CHGAP10645 457 aaKnown RBP24.03■■□□□ 1.44
CAPN1-205ENST00000526954 THEMISQ8N1K5 641 aaPredicted RBP24.03■■□□□ 1.44
CAPN1-205ENST00000526954 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
CAPN1-205ENST00000526954 SLIT1O75093 1534 aa24■■□□□ 1.43
CAPN1-205ENST00000526954 ARHGAP23Q9P227 1491 aa23.99■■□□□ 1.43
CAPN1-205ENST00000526954 NEUROD1Q13562 356 aa23.98■■□□□ 1.43
CAPN1-205ENST00000526954 TMEM2Q9UHN6 1383 aa23.98■■□□□ 1.43
CAPN1-205ENST00000526954 RPGRIP1LQ68CZ1 1315 aa23.97■■□□□ 1.43
CAPN1-205ENST00000526954 RGL3Q3MIN7 710 aa23.96■■□□□ 1.43
CAPN1-205ENST00000526954 PPLO60437 1756 aa23.96■■□□□ 1.43
CAPN1-205ENST00000526954 ZFYVE9O95405 1425 aa23.95■■□□□ 1.42
CAPN1-205ENST00000526954 ZNF326Q5BKZ1 582 aaKnown RBP23.95■■□□□ 1.42
CAPN1-205ENST00000526954 IFT172Q9UG01 1749 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms