RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 PPP6R1Q9UPN7 881 aa24.82■■□□□ 1.56
CHD7-204ENST00000526846 PTPRKQ15262 1439 aa24.81■■□□□ 1.56
CHD7-204ENST00000526846 NCOA1Q15788 1441 aa24.81■■□□□ 1.56
CHD7-204ENST00000526846 FAM50AQ14320 339 aaKnown RBP24.81■■□□□ 1.56
CHD7-204ENST00000526846 PLPPR3Q6T4P5 718 aa24.81■■□□□ 1.56
CHD7-204ENST00000526846 DEPDC5O75140 1603 aa24.81■■□□□ 1.56
CHD7-204ENST00000526846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.8■■□□□ 1.562e-6■■■■□ 19.8
CHD7-204ENST00000526846 ERBINQ96RT1 1412 aa24.8■■□□□ 1.56
CHD7-204ENST00000526846 ZC3H13Q5T200 1668 aaKnown RBP24.8■■□□□ 1.56
CHD7-204ENST00000526846 ZMYM3Q14202 1370 aa24.8■■□□□ 1.56
CHD7-204ENST00000526846 ESF1Q9H501 851 aaKnown RBP24.78■■□□□ 1.56
CHD7-204ENST00000526846 ANKRD30AQ9BXX3 1397 aa24.78■■□□□ 1.56
CHD7-204ENST00000526846 CEP152O94986 1710 aa24.78■■□□□ 1.56
CHD7-204ENST00000526846 RRBP1Q9P2E9 1410 aaKnown RBP24.78■■□□□ 1.56
CHD7-204ENST00000526846 PRDM15P57071 1507 aaPredicted RBP24.77■■□□□ 1.56
CHD7-204ENST00000526846 CHIC2Q9UKJ5 165 aa24.76■■□□□ 1.55
CHD7-204ENST00000526846 NPATQ14207 1427 aa24.76■■□□□ 1.55
CHD7-204ENST00000526846 RRP7BPQ9NSQ0 103 aa24.75■■□□□ 1.55
CHD7-204ENST00000526846 ABCC3O15438 1527 aa24.75■■□□□ 1.55
CHD7-204ENST00000526846 MYO3AQ8NEV4 1616 aa24.72■■□□□ 1.55
CHD7-204ENST00000526846 ZNF142P52746 1687 aaPredicted RBP24.71■■□□□ 1.55
CHD7-204ENST00000526846 CAMSAP1Q5T5Y3 1602 aa24.71■■□□□ 1.55
CHD7-204ENST00000526846 PZPP20742 1482 aa24.7■■□□□ 1.55
CHD7-204ENST00000526846 UHRF1BP1Q6BDS2 1440 aa24.69■■□□□ 1.54
CHD7-204ENST00000526846 VWDEQ8N2E2 1590 aa24.69■■□□□ 1.54
CHD7-204ENST00000526846 ROCK1Q13464 1354 aa24.68■■□□□ 1.54
CHD7-204ENST00000526846 WASHC2CQ9Y4E1 1318 aa24.66■■□□□ 1.54
CHD7-204ENST00000526846 STRCQ7RTU9 1775 aa24.65■■□□□ 1.54
CHD7-204ENST00000526846 ANKRD50Q9ULJ7 1429 aa24.64■■□□□ 1.54
CHD7-204ENST00000526846 HSPA2P54652 639 aa24.63■■□□□ 1.53
CHD7-204ENST00000526846 CFAP65Q6ZU64 1925 aaKnown RBP24.63■■□□□ 1.53
CHD7-204ENST00000526846 UNC13BO14795 1591 aa24.62■■□□□ 1.53
CHD7-204ENST00000526846 LMTK2Q8IWU2 1503 aa24.61■■□□□ 1.53
CHD7-204ENST00000526846 SPATA31D1Q6ZQQ2 1576 aa24.61■■□□□ 1.53
CHD7-204ENST00000526846 CEP170BQ9Y4F5 1589 aaPredicted RBP24.61■■□□□ 1.53
CHD7-204ENST00000526846 ARHGAP31Q2M1Z3 1444 aa24.58■■□□□ 1.53
CHD7-204ENST00000526846 GCC2Q8IWJ2 1684 aa24.57■■□□□ 1.52
CHD7-204ENST00000526846 FBXO31Q5XUX0 539 aaPredicted RBP24.57■■□□□ 1.52
CHD7-204ENST00000526846 ERVK-7P63135 1459 aa24.56■■□□□ 1.52
CHD7-204ENST00000526846 ITGAEP38570 1179 aa24.55■■□□□ 1.52
CHD7-204ENST00000526846 TNRQ92752 1358 aa24.54■■□□□ 1.52
CHD7-204ENST00000526846 A2ML1A8K2U0 1454 aa24.54■■□□□ 1.52
CHD7-204ENST00000526846 EFCAB6Q5THR3 1501 aa24.54■■□□□ 1.52
CHD7-204ENST00000526846 TET3O43151 1660 aa24.53■■□□□ 1.52
CHD7-204ENST00000526846 KANK1Q14678 1352 aa24.52■■□□□ 1.52
CHD7-204ENST00000526846 IQGAP3Q86VI3 1631 aa24.51■■□□□ 1.51
CHD7-204ENST00000526846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.51■■□□□ 1.512e-9■■■■□ 21.9
CHD7-204ENST00000526846 NLRP1Q9C000 1473 aa24.5■■□□□ 1.51
CHD7-204ENST00000526846 NAIPQ13075 1403 aa24.47■■□□□ 1.51
CHD7-204ENST00000526846 PLA2R1Q13018 1463 aa24.46■■□□□ 1.51
CHD7-204ENST00000526846 E9PCH4 1651 aa24.45■■□□□ 1.5
CHD7-204ENST00000526846 SYNMO15061 1565 aa24.45■■□□□ 1.5
CHD7-204ENST00000526846 UBR1Q8IWV7 1749 aa24.44■■□□□ 1.5
CHD7-204ENST00000526846 POLR1AO95602 1720 aaPredicted RBP24.44■■□□□ 1.5
CHD7-204ENST00000526846 HFM1A2PYH4 1435 aa24.43■■□□□ 1.5
CHD7-204ENST00000526846 RPRD2Q5VT52 1461 aaKnown RBP24.42■■□□□ 1.5
CHD7-204ENST00000526846 UGGT1Q9NYU2 1555 aa24.42■■□□□ 1.5
CHD7-204ENST00000526846 NOS1P29475 1434 aa24.41■■□□□ 1.5
CHD7-204ENST00000526846 PIK3C2BO00750 1634 aa24.39■■□□□ 1.5
CHD7-204ENST00000526846 KDM5AP29375 1690 aaKnown RBP24.39■■□□□ 1.49
CHD7-204ENST00000526846 PTPRTO14522 1441 aa24.38■■□□□ 1.49
CHD7-204ENST00000526846 NEURL4Q96JN8 1562 aa24.37■■□□□ 1.49
CHD7-204ENST00000526846 NUP155O75694 1391 aa24.34■■□□□ 1.49
CHD7-204ENST00000526846 NCKAP5LQ9HCH0 1330 aa24.32■■□□□ 1.48
CHD7-204ENST00000526846 MYO5BQ9ULV0 1848 aa24.31■■□□□ 1.48
CHD7-204ENST00000526846 DMRT2Q9Y5R5 561 aa24.3■■□□□ 1.48
CHD7-204ENST00000526846 SPHKAPQ2M3C7 1700 aa24.3■■□□□ 1.48
CHD7-204ENST00000526846 PKD2Q13563 968 aa24.29■■□□□ 1.48
CHD7-204ENST00000526846 ARHGAP23Q9P227 1491 aa24.29■■□□□ 1.48
CHD7-204ENST00000526846 SLIT1O75093 1534 aa24.29■■□□□ 1.48
CHD7-204ENST00000526846 ADGRB3O60242 1522 aa24.28■■□□□ 1.48
CHD7-204ENST00000526846 THEMISQ8N1K5 641 aaPredicted RBP24.27■■□□□ 1.48
CHD7-204ENST00000526846 MED14O60244 1454 aa24.26■■□□□ 1.47
CHD7-204ENST00000526846 IDI1Q13907 227 aa24.25■■□□□ 1.47
CHD7-204ENST00000526846 IQGAP1P46940 1657 aa24.24■■□□□ 1.47
CHD7-204ENST00000526846 TMEM131LA2VDJ0 1609 aa24.24■■□□□ 1.47
CHD7-204ENST00000526846 LTBP4Q8N2S1 1624 aa24.23■■□□□ 1.47
CHD7-204ENST00000526846 SLC52A1Q9NWF4 448 aa24.21■■□□□ 1.47
CHD7-204ENST00000526846 ANKLE2Q86XL3 938 aa24.19■■□□□ 1.46
CHD7-204ENST00000526846 SCAF11Q99590 1463 aaKnown RBP24.19■■□□□ 1.46
CHD7-204ENST00000526846 TMEM2Q9UHN6 1383 aa24.17■■□□□ 1.46
CHD7-204ENST00000526846 NPHP4O75161 1426 aaPredicted RBP24.17■■□□□ 1.46
CHD7-204ENST00000526846 TRPM2O94759 1503 aa24.16■■□□□ 1.46
CHD7-204ENST00000526846 CLTCL1P53675 1640 aa24.15■■□□□ 1.46
CHD7-204ENST00000526846 SETD5Q9C0A6 1442 aa24.14■■□□□ 1.45
CHD7-204ENST00000526846 LTKP29376 864 aa24.13■■□□□ 1.45
CHD7-204ENST00000526846 ZFYVE9O95405 1425 aa24.12■■□□□ 1.45
CHD7-204ENST00000526846 STRCP1A6NGW2 1772 aa24.11■■□□□ 1.45
CHD7-204ENST00000526846 TRIM52Q96A61 297 aa24.1■■□□□ 1.45
CHD7-204ENST00000526846 ZNF335Q9H4Z2 1342 aaPredicted RBP24.1■■□□□ 1.45
CHD7-204ENST00000526846 STAG3Q9UJ98 1225 aa24.09■■□□□ 1.45
CHD7-204ENST00000526846 KIF1BO60333 1816 aa24.09■■□□□ 1.45
CHD7-204ENST00000526846 CERKQ8TCT0 537 aa24.08■■□□□ 1.45
CHD7-204ENST00000526846 RAB3GAP2Q9H2M9 1393 aa24.07■■□□□ 1.44
CHD7-204ENST00000526846 TXNDC2Q86VQ3 553 aa24.07■■□□□ 1.44
CHD7-204ENST00000526846 SLC4A1APQ9BWU0 796 aaKnown RBP24.05■■□□□ 1.44
CHD7-204ENST00000526846 RIMS2Q9UQ26 1411 aa24.04■■□□□ 1.44
CHD7-204ENST00000526846 IQSEC2Q5JU85 1478 aa24.04■■□□□ 1.44
CHD7-204ENST00000526846 EID1Q9Y6B2 187 aa24.03■■□□□ 1.44
CHD7-204ENST00000526846 CPS1P31327 1500 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms