RNA–Protein interactions for RNA: ENST00000526388.1

LINC00958-202, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 607 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-202ENST00000526388 STRCQ7RTU9 1775 aa12.55□□□□□ -0.4
LINC00958-202ENST00000526388 SPAG9O60271 1321 aaKnown RBP12.55□□□□□ -0.4
LINC00958-202ENST00000526388 CEBPAP49715 358 aaPredicted RBP12.54□□□□□ -0.4
LINC00958-202ENST00000526388 CNTLNQ9NXG0 1405 aa12.54□□□□□ -0.4
LINC00958-202ENST00000526388 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
LINC00958-202ENST00000526388 HNRNPMP52272 730 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00958-202ENST00000526388 A2MP01023 1474 aa12.53□□□□□ -0.4
LINC00958-202ENST00000526388 ESF1Q9H501 851 aaKnown RBP12.52□□□□□ -0.41
LINC00958-202ENST00000526388 VPS8Q8N3P4 1428 aa12.52□□□□□ -0.41
LINC00958-202ENST00000526388 CAMSAP2Q08AD1 1489 aa12.52□□□□□ -0.41
LINC00958-202ENST00000526388 MYO3AQ8NEV4 1616 aa12.51□□□□□ -0.41
LINC00958-202ENST00000526388 POTEHQ6S545 545 aa12.51□□□□□ -0.41
LINC00958-202ENST00000526388 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
LINC00958-202ENST00000526388 ZNF142P52746 1687 aaPredicted RBP12.51□□□□□ -0.41
LINC00958-202ENST00000526388 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
LINC00958-202ENST00000526388 CCDC141Q6ZP82 1450 aa12.5□□□□□ -0.41
LINC00958-202ENST00000526388 MBD5Q9P267 1494 aa12.5□□□□□ -0.41
LINC00958-202ENST00000526388 ZNF644Q9H582 1327 aaPredicted RBP12.49□□□□□ -0.41
LINC00958-202ENST00000526388 ARHGEF5Q12774 1597 aa12.48□□□□□ -0.41
LINC00958-202ENST00000526388 FBXO41Q8TF61 875 aa12.48□□□□□ -0.41
LINC00958-202ENST00000526388 LRRC9Q6ZRR7 1453 aa12.47□□□□□ -0.41
LINC00958-202ENST00000526388 NPATQ14207 1427 aa12.47□□□□□ -0.41
LINC00958-202ENST00000526388 RTEL1-TNFRSF6BF6WH68 1400 aa12.45□□□□□ -0.42
LINC00958-202ENST00000526388 CEP170BQ9Y4F5 1589 aaPredicted RBP12.45□□□□□ -0.42
LINC00958-202ENST00000526388 MAP3K1Q13233 1512 aa12.44□□□□□ -0.42
LINC00958-202ENST00000526388 CAMSAP1Q5T5Y3 1602 aa12.44□□□□□ -0.42
LINC00958-202ENST00000526388 FAM135AQ9P2D6 1515 aa12.43□□□□□ -0.42
LINC00958-202ENST00000526388 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
LINC00958-202ENST00000526388 NCOA1Q15788 1441 aa12.43□□□□□ -0.42
LINC00958-202ENST00000526388 MAST1Q9Y2H9 1570 aa12.43□□□□□ -0.42
LINC00958-202ENST00000526388 ZMYM3Q14202 1370 aa12.43□□□□□ -0.42
LINC00958-202ENST00000526388 KDM5DQ9BY66 1539 aa12.42□□□□□ -0.42
LINC00958-202ENST00000526388 CROCC2H7BZ55 1655 aa12.42□□□□□ -0.42
LINC00958-202ENST00000526388 PTPRKQ15262 1439 aa12.41□□□□□ -0.42
LINC00958-202ENST00000526388 GGT6Q6P531 493 aa12.41□□□□□ -0.42
LINC00958-202ENST00000526388 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.42
LINC00958-202ENST00000526388 EIF2AK4Q9P2K8 1649 aaKnown RBP12.4□□□□□ -0.42
LINC00958-202ENST00000526388 POLR1AO95602 1720 aaPredicted RBP12.4□□□□□ -0.42
LINC00958-202ENST00000526388 PTPRTO14522 1441 aa12.4□□□□□ -0.42
LINC00958-202ENST00000526388 ZC3H13Q5T200 1668 aaKnown RBP12.4□□□□□ -0.42
LINC00958-202ENST00000526388 DHX29Q7Z478 1369 aaKnown RBP12.4□□□□□ -0.42
LINC00958-202ENST00000526388 MYOM3Q5VTT5 1437 aa12.39□□□□□ -0.43
LINC00958-202ENST00000526388 CERKQ8TCT0 537 aa12.39□□□□□ -0.43
LINC00958-202ENST00000526388 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
LINC00958-202ENST00000526388 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
LINC00958-202ENST00000526388 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
LINC00958-202ENST00000526388 PZPP20742 1482 aa12.37□□□□□ -0.43
LINC00958-202ENST00000526388 PLA2R1Q13018 1463 aa12.37□□□□□ -0.43
LINC00958-202ENST00000526388 CEP152O94986 1710 aa12.37□□□□□ -0.43
LINC00958-202ENST00000526388 DNMT1P26358 1616 aaKnown RBP12.37□□□□□ -0.43
LINC00958-202ENST00000526388 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
LINC00958-202ENST00000526388 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
LINC00958-202ENST00000526388 RSPH4AQ5TD94 716 aa12.36□□□□□ -0.43
LINC00958-202ENST00000526388 LTBP4Q8N2S1 1624 aa12.36□□□□□ -0.43
LINC00958-202ENST00000526388 A2ML1A8K2U0 1454 aa12.35□□□□□ -0.43
LINC00958-202ENST00000526388 KIF3BO15066 747 aa12.35□□□□□ -0.43
LINC00958-202ENST00000526388 KANK4Q5T7N3 995 aaPredicted RBP12.35□□□□□ -0.43
LINC00958-202ENST00000526388 MROH1Q8NDA8 1641 aa12.35□□□□□ -0.43
LINC00958-202ENST00000526388 TCOF1Q13428 1488 aaKnown RBP12.34□□□□□ -0.43
LINC00958-202ENST00000526388 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
LINC00958-202ENST00000526388 ABCC3O15438 1527 aa12.33□□□□□ -0.44
LINC00958-202ENST00000526388 TSPY4P0CV99 314 aa12.33□□□□□ -0.44
LINC00958-202ENST00000526388 TSPY10P0CW01 314 aa12.33□□□□□ -0.44
LINC00958-202ENST00000526388 DUOX2Q9NRD8 1548 aa12.32□□□□□ -0.44
LINC00958-202ENST00000526388 TNRQ92752 1358 aa12.32□□□□□ -0.44
LINC00958-202ENST00000526388 CFAP65Q6ZU64 1925 aaKnown RBP12.31□□□□□ -0.44
LINC00958-202ENST00000526388 NEURL4Q96JN8 1562 aa12.31□□□□□ -0.44
LINC00958-202ENST00000526388 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
LINC00958-202ENST00000526388 IQSEC2Q5JU85 1478 aa12.31□□□□□ -0.44
LINC00958-202ENST00000526388 PRDM15P57071 1507 aaPredicted RBP12.31□□□□□ -0.44
LINC00958-202ENST00000526388 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
LINC00958-202ENST00000526388 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
LINC00958-202ENST00000526388 WASHC2CQ9Y4E1 1318 aa12.3□□□□□ -0.44
LINC00958-202ENST00000526388 DEPDC5O75140 1603 aa12.29□□□□□ -0.44
LINC00958-202ENST00000526388 NLRP1Q9C000 1473 aa12.29□□□□□ -0.44
LINC00958-202ENST00000526388 SPATA31D1Q6ZQQ2 1576 aa12.29□□□□□ -0.44
LINC00958-202ENST00000526388 FGD6Q6ZV73 1430 aa12.28□□□□□ -0.44
LINC00958-202ENST00000526388 UGGT1Q9NYU2 1555 aa12.28□□□□□ -0.44
LINC00958-202ENST00000526388 DAPK1P53355 1430 aa12.28□□□□□ -0.44
LINC00958-202ENST00000526388 ERBINQ96RT1 1412 aa12.28□□□□□ -0.44
LINC00958-202ENST00000526388 PKD2Q13563 968 aa12.27□□□□□ -0.45
LINC00958-202ENST00000526388 FBXO31Q5XUX0 539 aaPredicted RBP12.27□□□□□ -0.45
LINC00958-202ENST00000526388 KIF15Q9NS87 1388 aa12.27□□□□□ -0.45
LINC00958-202ENST00000526388 ABCC5O15440 1437 aa12.27□□□□□ -0.45
LINC00958-202ENST00000526388 ERVK-7P63135 1459 aa12.27□□□□□ -0.45
LINC00958-202ENST00000526388 IQGAP1P46940 1657 aa12.26□□□□□ -0.45
LINC00958-202ENST00000526388 UBR1Q8IWV7 1749 aa12.26□□□□□ -0.45
LINC00958-202ENST00000526388 ZNF335Q9H4Z2 1342 aaPredicted RBP12.25□□□□□ -0.45
LINC00958-202ENST00000526388 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
LINC00958-202ENST00000526388 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
LINC00958-202ENST00000526388 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC00958-202ENST00000526388 VWDEQ8N2E2 1590 aa12.22□□□□□ -0.45
LINC00958-202ENST00000526388 CPS1P31327 1500 aa12.21□□□□□ -0.45
LINC00958-202ENST00000526388 PIK3C2BO00750 1634 aa12.21□□□□□ -0.46
LINC00958-202ENST00000526388 MED14O60244 1454 aa12.2□□□□□ -0.46
LINC00958-202ENST00000526388 NPHP4O75161 1426 aaPredicted RBP12.2□□□□□ -0.46
LINC00958-202ENST00000526388 ANKRD30AQ9BXX3 1397 aa12.19□□□□□ -0.46
LINC00958-202ENST00000526388 SYNMO15061 1565 aa12.19□□□□□ -0.46
LINC00958-202ENST00000526388 RRP7BPQ9NSQ0 103 aa12.19□□□□□ -0.46
LINC00958-202ENST00000526388 EFCAB6Q5THR3 1501 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms