RNA–Protein interactions for RNA: ENST00000526163.5

NXF1-203, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-203ENST00000526163 ERBINQ96RT1 1412 aa17.41■□□□□ 0.38
NXF1-203ENST00000526163 MROH2AA6NES4 1674 aa17.4■□□□□ 0.38
NXF1-203ENST00000526163 ROCK1Q13464 1354 aa17.39■□□□□ 0.37
NXF1-203ENST00000526163 RNF17Q9BXT8 1623 aaKnown RBP17.38■□□□□ 0.37
NXF1-203ENST00000526163 SETD1BQ9UPS6 1966 aaKnown RBP17.38■□□□□ 0.37
NXF1-203ENST00000526163 ZMYM3Q14202 1370 aa17.37■□□□□ 0.37
NXF1-203ENST00000526163 PTPRKQ15262 1439 aa17.37■□□□□ 0.37
NXF1-203ENST00000526163 C3P01024 1663 aa17.36■□□□□ 0.37
NXF1-203ENST00000526163 CLTCQ00610 1675 aaKnown RBP17.36■□□□□ 0.37
NXF1-203ENST00000526163 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
NXF1-203ENST00000526163 KDM5DQ9BY66 1539 aa17.35■□□□□ 0.37
NXF1-203ENST00000526163 CEBPAP49715 358 aaPredicted RBP17.34■□□□□ 0.37
NXF1-203ENST00000526163 NPATQ14207 1427 aa17.32■□□□□ 0.36
NXF1-203ENST00000526163 ANKRD50Q9ULJ7 1429 aa17.32■□□□□ 0.36
NXF1-203ENST00000526163 ITGAEP38570 1179 aa17.32■□□□□ 0.36
NXF1-203ENST00000526163 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
NXF1-203ENST00000526163 ZC3H13Q5T200 1668 aaKnown RBP17.32■□□□□ 0.36
NXF1-203ENST00000526163 DEPDC5O75140 1603 aa17.3■□□□□ 0.36
NXF1-203ENST00000526163 MROH1Q8NDA8 1641 aa17.3■□□□□ 0.36
NXF1-203ENST00000526163 FBXO41Q8TF61 875 aa17.3■□□□□ 0.36
NXF1-203ENST00000526163 PRDM15P57071 1507 aaPredicted RBP17.3■□□□□ 0.36
NXF1-203ENST00000526163 KANK1Q14678 1352 aa17.29■□□□□ 0.36
NXF1-203ENST00000526163 PREX1Q8TCU6 1659 aa17.28■□□□□ 0.36
NXF1-203ENST00000526163 ABCC3O15438 1527 aa17.27■□□□□ 0.36
NXF1-203ENST00000526163 PZPP20742 1482 aa17.26■□□□□ 0.35
NXF1-203ENST00000526163 LMTK3Q96Q04 1460 aa17.26■□□□□ 0.35
NXF1-203ENST00000526163 UHRF1BP1Q6BDS2 1440 aa17.25■□□□□ 0.35
NXF1-203ENST00000526163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.24■□□□□ 0.351e-7■■■□□ 18.8
NXF1-203ENST00000526163 VWDEQ8N2E2 1590 aa17.23■□□□□ 0.35
NXF1-203ENST00000526163 CEP152O94986 1710 aa17.23■□□□□ 0.35
NXF1-203ENST00000526163 ARHGAP31Q2M1Z3 1444 aa17.22■□□□□ 0.35
NXF1-203ENST00000526163 LMTK2Q8IWU2 1503 aa17.22■□□□□ 0.35
NXF1-203ENST00000526163 CAMSAP1Q5T5Y3 1602 aa17.22■□□□□ 0.35
NXF1-203ENST00000526163 HFM1A2PYH4 1435 aa17.21■□□□□ 0.34
NXF1-203ENST00000526163 UNC13BO14795 1591 aa17.2■□□□□ 0.34
NXF1-203ENST00000526163 FBXO31Q5XUX0 539 aaPredicted RBP17.19■□□□□ 0.34
NXF1-203ENST00000526163 NAIPQ13075 1403 aa17.19■□□□□ 0.34
NXF1-203ENST00000526163 GCC2Q8IWJ2 1684 aa17.19■□□□□ 0.34
NXF1-203ENST00000526163 TNRQ92752 1358 aa17.18■□□□□ 0.34
NXF1-203ENST00000526163 SPATA31D1Q6ZQQ2 1576 aa17.16■□□□□ 0.34
NXF1-203ENST00000526163 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
NXF1-203ENST00000526163 ZNF142P52746 1687 aaPredicted RBP17.16■□□□□ 0.34
NXF1-203ENST00000526163 CFAP65Q6ZU64 1925 aaKnown RBP17.15■□□□□ 0.34
NXF1-203ENST00000526163 HSPA2P54652 639 aa17.15■□□□□ 0.34
NXF1-203ENST00000526163 ERVK-7P63135 1459 aa17.15■□□□□ 0.34
NXF1-203ENST00000526163 NLRP1Q9C000 1473 aa17.15■□□□□ 0.34
NXF1-203ENST00000526163 NUP155O75694 1391 aa17.15■□□□□ 0.34
NXF1-203ENST00000526163 TET3O43151 1660 aa17.14■□□□□ 0.33
NXF1-203ENST00000526163 RPRD2Q5VT52 1461 aaKnown RBP17.14■□□□□ 0.33
NXF1-203ENST00000526163 EFCAB6Q5THR3 1501 aa17.14■□□□□ 0.33
NXF1-203ENST00000526163 ACIN1Q9UKV3 1341 aaKnown RBP17.14■□□□□ 0.33
NXF1-203ENST00000526163 CEP170BQ9Y4F5 1589 aaPredicted RBP17.14■□□□□ 0.33
NXF1-203ENST00000526163 IQGAP3Q86VI3 1631 aa17.14■□□□□ 0.33
NXF1-203ENST00000526163 A2ML1A8K2U0 1454 aa17.13■□□□□ 0.33
NXF1-203ENST00000526163 PLA2R1Q13018 1463 aa17.08■□□□□ 0.32
NXF1-203ENST00000526163 NOS1P29475 1434 aa17.08■□□□□ 0.32
NXF1-203ENST00000526163 THEMISQ8N1K5 641 aaPredicted RBP17.08■□□□□ 0.32
NXF1-203ENST00000526163 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
NXF1-203ENST00000526163 UGGT1Q9NYU2 1555 aa17.06■□□□□ 0.32
NXF1-203ENST00000526163 SLC52A1Q9NWF4 448 aa17.06■□□□□ 0.32
NXF1-203ENST00000526163 E9PCH4 1651 aa17.06■□□□□ 0.32
NXF1-203ENST00000526163 STRCQ7RTU9 1775 aa17.05■□□□□ 0.32
NXF1-203ENST00000526163 TRIM52Q96A61 297 aa17.05■□□□□ 0.32
NXF1-203ENST00000526163 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
NXF1-203ENST00000526163 PKD2Q13563 968 aa17.04■□□□□ 0.32
NXF1-203ENST00000526163 KDM5AP29375 1690 aaKnown RBP17.03■□□□□ 0.32
NXF1-203ENST00000526163 SYNMO15061 1565 aa17.02■□□□□ 0.32
NXF1-203ENST00000526163 IDI1Q13907 227 aa17.02■□□□□ 0.32
NXF1-203ENST00000526163 PTPRTO14522 1441 aa17.01■□□□□ 0.31
NXF1-203ENST00000526163 UBR1Q8IWV7 1749 aa17.01■□□□□ 0.31
NXF1-203ENST00000526163 ANKLE2Q86XL3 938 aa17■□□□□ 0.31
NXF1-203ENST00000526163 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
NXF1-203ENST00000526163 HRCP23327 699 aa16.99■□□□□ 0.31
NXF1-203ENST00000526163 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
NXF1-203ENST00000526163 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
NXF1-203ENST00000526163 NCKAP5LQ9HCH0 1330 aa16.97■□□□□ 0.31
NXF1-203ENST00000526163 POLR1AO95602 1720 aaPredicted RBP16.96■□□□□ 0.31
NXF1-203ENST00000526163 SPHKAPQ2M3C7 1700 aa16.96■□□□□ 0.31
NXF1-203ENST00000526163 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.31
NXF1-203ENST00000526163 SLIT1O75093 1534 aa16.96■□□□□ 0.3
NXF1-203ENST00000526163 ADGRB3O60242 1522 aa16.95■□□□□ 0.3
NXF1-203ENST00000526163 ARHGAP23Q9P227 1491 aa16.94■□□□□ 0.3
NXF1-203ENST00000526163 MPHOSPH9Q99550 1183 aa16.94■□□□□ 0.3
NXF1-203ENST00000526163 EID1Q9Y6B2 187 aa16.94■□□□□ 0.3
NXF1-203ENST00000526163 MED14O60244 1454 aa16.93■□□□□ 0.3
NXF1-203ENST00000526163 TMEM2Q9UHN6 1383 aa16.93■□□□□ 0.3
NXF1-203ENST00000526163 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
NXF1-203ENST00000526163 CERKQ8TCT0 537 aa16.92■□□□□ 0.3
NXF1-203ENST00000526163 TMEM131LA2VDJ0 1609 aa16.92■□□□□ 0.3
NXF1-203ENST00000526163 TRPM2O94759 1503 aa16.91■□□□□ 0.3
NXF1-203ENST00000526163 TXNDC2Q86VQ3 553 aa16.91■□□□□ 0.3
NXF1-203ENST00000526163 SCAF11Q99590 1463 aaKnown RBP16.91■□□□□ 0.3
NXF1-203ENST00000526163 NEURL4Q96JN8 1562 aa16.9■□□□□ 0.3
NXF1-203ENST00000526163 NPHP4O75161 1426 aaPredicted RBP16.89■□□□□ 0.29
NXF1-203ENST00000526163 CHGAP10645 457 aaKnown RBP16.88■□□□□ 0.29
NXF1-203ENST00000526163 LTKP29376 864 aa16.88■□□□□ 0.29
NXF1-203ENST00000526163 MYO5BQ9ULV0 1848 aa16.88■□□□□ 0.29
NXF1-203ENST00000526163 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
NXF1-203ENST00000526163 ILDR2Q71H61 639 aa16.87■□□□□ 0.29
NXF1-203ENST00000526163 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms