RNA–Protein interactions for RNA: ENST00000526161.5

TRIM29-208, Transcript of tripartite motif containing 29, humanhuman

TSL 1 (best)

Gene TRIM29, Length 1,836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-208ENST00000526161 WASHC2CQ9Y4E1 1318 aa23.33■■□□□ 1.32
TRIM29-208ENST00000526161 EIF2AK4Q9P2K8 1649 aaKnown RBP23.32■■□□□ 1.32
TRIM29-208ENST00000526161 NAIPQ13075 1403 aa23.31■■□□□ 1.32
TRIM29-208ENST00000526161 PTPRMP28827 1452 aa23.3■■□□□ 1.32
TRIM29-208ENST00000526161 CEBPAP49715 358 aaPredicted RBP23.29■■□□□ 1.32
TRIM29-208ENST00000526161 HFM1A2PYH4 1435 aa23.29■■□□□ 1.32
TRIM29-208ENST00000526161 RIMS1Q86UR5 1692 aaKnown RBP23.28■■□□□ 1.32
TRIM29-208ENST00000526161 FER1L4A9Z1Z3 1794 aa23.28■■□□□ 1.32
TRIM29-208ENST00000526161 CNTLNQ9NXG0 1405 aa23.27■■□□□ 1.32
TRIM29-208ENST00000526161 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
TRIM29-208ENST00000526161 ZMYM3Q14202 1370 aa23.26■■□□□ 1.31
TRIM29-208ENST00000526161 KANK1Q14678 1352 aa23.25■■□□□ 1.31
TRIM29-208ENST00000526161 MROH1Q8NDA8 1641 aa23.24■■□□□ 1.31
TRIM29-208ENST00000526161 KDM5DQ9BY66 1539 aa23.23■■□□□ 1.31
TRIM29-208ENST00000526161 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
TRIM29-208ENST00000526161 CLTCQ00610 1675 aaKnown RBP23.21■■□□□ 1.31
TRIM29-208ENST00000526161 PRDM15P57071 1507 aaPredicted RBP23.21■■□□□ 1.31
TRIM29-208ENST00000526161 DEPDC5O75140 1603 aa23.2■■□□□ 1.3
TRIM29-208ENST00000526161 ABCC3O15438 1527 aa23.19■■□□□ 1.3
TRIM29-208ENST00000526161 NUP155O75694 1391 aa23.19■■□□□ 1.3
TRIM29-208ENST00000526161 GCC2Q8IWJ2 1684 aa23.19■■□□□ 1.3
TRIM29-208ENST00000526161 SETD5Q9C0A6 1442 aa23.18■■□□□ 1.3
TRIM29-208ENST00000526161 TRIM52Q96A61 297 aa23.17■■□□□ 1.3
TRIM29-208ENST00000526161 FAM135AQ9P2D6 1515 aa23.17■■□□□ 1.3
TRIM29-208ENST00000526161 FBXO31Q5XUX0 539 aaPredicted RBP23.15■■□□□ 1.3
TRIM29-208ENST00000526161 UNC13BO14795 1591 aa23.14■■□□□ 1.29
TRIM29-208ENST00000526161 C3P01024 1663 aa23.13■■□□□ 1.29
TRIM29-208ENST00000526161 VWDEQ8N2E2 1590 aa23.13■■□□□ 1.29
TRIM29-208ENST00000526161 MROH2AA6NES4 1674 aa23.13■■□□□ 1.29
TRIM29-208ENST00000526161 RAB3GAP2Q9H2M9 1393 aa23.12■■□□□ 1.29
TRIM29-208ENST00000526161 ZC3H13Q5T200 1668 aaKnown RBP23.12■■□□□ 1.29
TRIM29-208ENST00000526161 CEP152O94986 1710 aa23.11■■□□□ 1.29
TRIM29-208ENST00000526161 PZPP20742 1482 aa23.1■■□□□ 1.29
TRIM29-208ENST00000526161 LMTK2Q8IWU2 1503 aa23.1■■□□□ 1.29
TRIM29-208ENST00000526161 NPATQ14207 1427 aa23.08■■□□□ 1.29
TRIM29-208ENST00000526161 CAMSAP1Q5T5Y3 1602 aa23.08■■□□□ 1.28
TRIM29-208ENST00000526161 ARHGAP31Q2M1Z3 1444 aa23.07■■□□□ 1.28
TRIM29-208ENST00000526161 SLC4A1APQ9BWU0 796 aaKnown RBP23.05■■□□□ 1.28
TRIM29-208ENST00000526161 IQGAP3Q86VI3 1631 aa23.04■■□□□ 1.28
TRIM29-208ENST00000526161 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
TRIM29-208ENST00000526161 TNRQ92752 1358 aa23.02■■□□□ 1.28
TRIM29-208ENST00000526161 ACIN1Q9UKV3 1341 aaKnown RBP23.01■■□□□ 1.27
TRIM29-208ENST00000526161 ERVK-7P63135 1459 aa23.01■■□□□ 1.27
TRIM29-208ENST00000526161 TET3O43151 1660 aa23.01■■□□□ 1.27
TRIM29-208ENST00000526161 HRCP23327 699 aa23■■□□□ 1.27
TRIM29-208ENST00000526161 PKD2Q13563 968 aa23■■□□□ 1.27
TRIM29-208ENST00000526161 MPHOSPH9Q99550 1183 aa22.99■■□□□ 1.27
TRIM29-208ENST00000526161 UHRF1BP1Q6BDS2 1440 aa22.99■■□□□ 1.27
TRIM29-208ENST00000526161 RPRD2Q5VT52 1461 aaKnown RBP22.98■■□□□ 1.27
TRIM29-208ENST00000526161 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
TRIM29-208ENST00000526161 SPATA31D1Q6ZQQ2 1576 aa22.97■■□□□ 1.27
TRIM29-208ENST00000526161 FOXD1Q16676 465 aa22.96■■□□□ 1.27
TRIM29-208ENST00000526161 HSPA2P54652 639 aa22.95■■□□□ 1.26
TRIM29-208ENST00000526161 LMTK3Q96Q04 1460 aa22.95■■□□□ 1.26
TRIM29-208ENST00000526161 CFAP65Q6ZU64 1925 aaKnown RBP22.94■■□□□ 1.26
TRIM29-208ENST00000526161 E9PCH4 1651 aa22.94■■□□□ 1.26
TRIM29-208ENST00000526161 PREX1Q8TCU6 1659 aa22.94■■□□□ 1.26
TRIM29-208ENST00000526161 NOS1P29475 1434 aa22.93■■□□□ 1.26
TRIM29-208ENST00000526161 SETD1BQ9UPS6 1966 aaKnown RBP22.93■■□□□ 1.26
TRIM29-208ENST00000526161 IDI1Q13907 227 aa22.92■■□□□ 1.26
TRIM29-208ENST00000526161 NLRP1Q9C000 1473 aa22.9■■□□□ 1.26
TRIM29-208ENST00000526161 MYO3AQ8NEV4 1616 aa22.9■■□□□ 1.26
TRIM29-208ENST00000526161 SLC52A1Q9NWF4 448 aa22.89■■□□□ 1.26
TRIM29-208ENST00000526161 SYNMO15061 1565 aa22.88■■□□□ 1.25
TRIM29-208ENST00000526161 A2ML1A8K2U0 1454 aa22.88■■□□□ 1.25
TRIM29-208ENST00000526161 STAG3Q9UJ98 1225 aa22.87■■□□□ 1.25
TRIM29-208ENST00000526161 CEP170BQ9Y4F5 1589 aaPredicted RBP22.87■■□□□ 1.25
TRIM29-208ENST00000526161 PTPRTO14522 1441 aa22.85■■□□□ 1.25
TRIM29-208ENST00000526161 THEMISQ8N1K5 641 aaPredicted RBP22.84■■□□□ 1.25
TRIM29-208ENST00000526161 UGGT1Q9NYU2 1555 aa22.84■■□□□ 1.25
TRIM29-208ENST00000526161 CHGAP10645 457 aaKnown RBP22.83■■□□□ 1.25
TRIM29-208ENST00000526161 PLA2R1Q13018 1463 aa22.82■■□□□ 1.24
TRIM29-208ENST00000526161 ZNF142P52746 1687 aaPredicted RBP22.8■■□□□ 1.24
TRIM29-208ENST00000526161 SPHKAPQ2M3C7 1700 aa22.78■■□□□ 1.24
TRIM29-208ENST00000526161 PIK3C2BO00750 1634 aa22.78■■□□□ 1.24
TRIM29-208ENST00000526161 TRPM2O94759 1503 aa22.77■■□□□ 1.24
TRIM29-208ENST00000526161 NCKAP5LQ9HCH0 1330 aa22.74■■□□□ 1.23
TRIM29-208ENST00000526161 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
TRIM29-208ENST00000526161 ANKLE2Q86XL3 938 aa22.73■■□□□ 1.23
TRIM29-208ENST00000526161 UBR1Q8IWV7 1749 aa22.73■■□□□ 1.23
TRIM29-208ENST00000526161 ADGRB3O60242 1522 aa22.72■■□□□ 1.23
TRIM29-208ENST00000526161 ANKRD30BQ9BXX2 1392 aa22.72■■□□□ 1.23
TRIM29-208ENST00000526161 CLTCL1P53675 1640 aa22.72■■□□□ 1.23
TRIM29-208ENST00000526161 TMEM2Q9UHN6 1383 aa22.71■■□□□ 1.23
TRIM29-208ENST00000526161 ZNF326Q5BKZ1 582 aaKnown RBP22.71■■□□□ 1.23
TRIM29-208ENST00000526161 TXNDC2Q86VQ3 553 aa22.7■■□□□ 1.22
TRIM29-208ENST00000526161 DHX57Q6P158 1386 aaKnown RBP22.69■■□□□ 1.22
TRIM29-208ENST00000526161 EID1Q9Y6B2 187 aa22.69■■□□□ 1.22
TRIM29-208ENST00000526161 LTKP29376 864 aa22.68■■□□□ 1.22
TRIM29-208ENST00000526161 TMEM131LA2VDJ0 1609 aa22.68■■□□□ 1.22
TRIM29-208ENST00000526161 NUTM2DQ5VT03 806 aaPredicted RBP22.66■■□□□ 1.22
TRIM29-208ENST00000526161 RGL3Q3MIN7 710 aa22.66■■□□□ 1.22
TRIM29-208ENST00000526161 KDM5AP29375 1690 aaKnown RBP22.65■■□□□ 1.22
TRIM29-208ENST00000526161 ARHGAP23Q9P227 1491 aa22.65■■□□□ 1.22
TRIM29-208ENST00000526161 SLIT1O75093 1534 aa22.65■■□□□ 1.22
TRIM29-208ENST00000526161 HDGFP51858 240 aaKnown RBP22.64■■□□□ 1.22
TRIM29-208ENST00000526161 DMRT2Q9Y5R5 561 aa22.64■■□□□ 1.22
TRIM29-208ENST00000526161 PPP1R15AO75807 674 aaPredicted RBP22.64■■□□□ 1.21
TRIM29-208ENST00000526161 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.21
TRIM29-208ENST00000526161 RIMS2Q9UQ26 1411 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms