RNA–Protein interactions for RNA: ENST00000526121.5

SYVN1-207, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-207ENST00000526121 PIP4K2BP78356 416 aa16.19■□□□□ 0.18
SYVN1-207ENST00000526121 FAM135AQ9P2D6 1515 aa16.19■□□□□ 0.18
SYVN1-207ENST00000526121 RTEL1-TNFRSF6BF6WH68 1400 aa16.19■□□□□ 0.18
SYVN1-207ENST00000526121 TIAM1Q13009 1591 aa16.18■□□□□ 0.18
SYVN1-207ENST00000526121 TNRQ92752 1358 aa16.18■□□□□ 0.18
SYVN1-207ENST00000526121 KDM5DQ9BY66 1539 aa16.17■□□□□ 0.18
SYVN1-207ENST00000526121 PZPP20742 1482 aa16.16■□□□□ 0.18
SYVN1-207ENST00000526121 MBD5Q9P267 1494 aa16.16■□□□□ 0.18
SYVN1-207ENST00000526121 DHX29Q7Z478 1369 aaKnown RBP16.16■□□□□ 0.18
SYVN1-207ENST00000526121 ZNF644Q9H582 1327 aaPredicted RBP16.15■□□□□ 0.18
SYVN1-207ENST00000526121 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.18
SYVN1-207ENST00000526121 VWDEQ8N2E2 1590 aa16.14■□□□□ 0.17
SYVN1-207ENST00000526121 DEPDC5O75140 1603 aa16.13■□□□□ 0.17
SYVN1-207ENST00000526121 FBXO31Q5XUX0 539 aaPredicted RBP16.13■□□□□ 0.17
SYVN1-207ENST00000526121 ANKLE2Q86XL3 938 aa16.13■□□□□ 0.17
SYVN1-207ENST00000526121 NLRP1Q9C000 1473 aa16.12■□□□□ 0.17
SYVN1-207ENST00000526121 KIF3BO15066 747 aa16.12■□□□□ 0.17
SYVN1-207ENST00000526121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.17
SYVN1-207ENST00000526121 MED14O60244 1454 aa16.11■□□□□ 0.17
SYVN1-207ENST00000526121 CCDC141Q6ZP82 1450 aa16.11■□□□□ 0.17
SYVN1-207ENST00000526121 THEMISQ8N1K5 641 aaPredicted RBP16.11■□□□□ 0.17
SYVN1-207ENST00000526121 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
SYVN1-207ENST00000526121 UGGT1Q9NYU2 1555 aa16.11■□□□□ 0.17
SYVN1-207ENST00000526121 NPHP4O75161 1426 aaPredicted RBP16.11■□□□□ 0.17
SYVN1-207ENST00000526121 ALKQ9UM73 1620 aa16.1■□□□□ 0.17
SYVN1-207ENST00000526121 IQGAP1P46940 1657 aa16.1■□□□□ 0.17
SYVN1-207ENST00000526121 WASHC2CQ9Y4E1 1318 aa16.1■□□□□ 0.17
SYVN1-207ENST00000526121 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
SYVN1-207ENST00000526121 MIA2Q96PC5 1412 aa16.1■□□□□ 0.17
SYVN1-207ENST00000526121 SYNMO15061 1565 aa16.07■□□□□ 0.16
SYVN1-207ENST00000526121 RNF17Q9BXT8 1623 aaKnown RBP16.06■□□□□ 0.16
SYVN1-207ENST00000526121 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
SYVN1-207ENST00000526121 STRCP1A6NGW2 1772 aa16.05■□□□□ 0.16
SYVN1-207ENST00000526121 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
SYVN1-207ENST00000526121 ZC3H13Q5T200 1668 aaKnown RBP16.04■□□□□ 0.16
SYVN1-207ENST00000526121 LRRC7Q96NW7 1537 aa16.04■□□□□ 0.16
SYVN1-207ENST00000526121 ARHGEF5Q12774 1597 aa16.03■□□□□ 0.16
SYVN1-207ENST00000526121 NCOA2Q15596 1464 aa16.02■□□□□ 0.15
SYVN1-207ENST00000526121 ABCC3O15438 1527 aa16■□□□□ 0.15
SYVN1-207ENST00000526121 TSPY4P0CV99 314 aa15.99■□□□□ 0.15
SYVN1-207ENST00000526121 TSPY10P0CW01 314 aa15.99■□□□□ 0.15
SYVN1-207ENST00000526121 ERVK-7P63135 1459 aa15.98■□□□□ 0.15
SYVN1-207ENST00000526121 EIF2AK4Q9P2K8 1649 aaKnown RBP15.98■□□□□ 0.15
SYVN1-207ENST00000526121 UBR1Q8IWV7 1749 aa15.98■□□□□ 0.15
SYVN1-207ENST00000526121 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
SYVN1-207ENST00000526121 CFAP65Q6ZU64 1925 aaKnown RBP15.98■□□□□ 0.15
SYVN1-207ENST00000526121 MAST1Q9Y2H9 1570 aa15.96■□□□□ 0.15
SYVN1-207ENST00000526121 CEP152O94986 1710 aa15.95■□□□□ 0.14
SYVN1-207ENST00000526121 SCAF11Q99590 1463 aaKnown RBP15.95■□□□□ 0.14
SYVN1-207ENST00000526121 XIRP1Q702N8 1843 aaKnown RBP15.94■□□□□ 0.14
SYVN1-207ENST00000526121 MROH1Q8NDA8 1641 aa15.94■□□□□ 0.14
SYVN1-207ENST00000526121 SLIT1O75093 1534 aa15.91■□□□□ 0.14
SYVN1-207ENST00000526121 ARHGAP23Q9P227 1491 aa15.91■□□□□ 0.14
SYVN1-207ENST00000526121 RGS17Q9UGC6 210 aaPredicted RBP15.89■□□□□ 0.13
SYVN1-207ENST00000526121 TXNDC2Q86VQ3 553 aa15.88■□□□□ 0.13
SYVN1-207ENST00000526121 LTKP29376 864 aa15.87■□□□□ 0.13
SYVN1-207ENST00000526121 DUOX2Q9NRD8 1548 aa15.87■□□□□ 0.13
SYVN1-207ENST00000526121 FAM135BQ49AJ0 1406 aa15.86■□□□□ 0.13
SYVN1-207ENST00000526121 PRDM15P57071 1507 aaPredicted RBP15.86■□□□□ 0.13
SYVN1-207ENST00000526121 EID1Q9Y6B2 187 aa15.86■□□□□ 0.13
SYVN1-207ENST00000526121 ARHGAP31Q2M1Z3 1444 aa15.85■□□□□ 0.13
SYVN1-207ENST00000526121 LRRC9Q6ZRR7 1453 aa15.85■□□□□ 0.13
SYVN1-207ENST00000526121 PIK3C2BO00750 1634 aa15.84■□□□□ 0.13
SYVN1-207ENST00000526121 KDM5AP29375 1690 aaKnown RBP15.83■□□□□ 0.12
SYVN1-207ENST00000526121 ROBO1Q9Y6N7 1651 aa15.83■□□□□ 0.12
SYVN1-207ENST00000526121 TMEM2Q9UHN6 1383 aa15.82■□□□□ 0.12
SYVN1-207ENST00000526121 MYOM3Q5VTT5 1437 aa15.82■□□□□ 0.12
SYVN1-207ENST00000526121 TMEM94Q12767 1356 aa15.81■□□□□ 0.12
SYVN1-207ENST00000526121 ERBINQ96RT1 1412 aa15.81■□□□□ 0.12
SYVN1-207ENST00000526121 POTEAQ6S8J7 498 aa15.8■□□□□ 0.12
SYVN1-207ENST00000526121 CROCC2H7BZ55 1655 aa15.79■□□□□ 0.12
SYVN1-207ENST00000526121 MAP3K1Q13233 1512 aa15.79■□□□□ 0.12
SYVN1-207ENST00000526121 EFCAB6Q5THR3 1501 aa15.79■□□□□ 0.12
SYVN1-207ENST00000526121 KIF15Q9NS87 1388 aa15.79■□□□□ 0.12
SYVN1-207ENST00000526121 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
SYVN1-207ENST00000526121 VPS8Q8N3P4 1428 aa15.77■□□□□ 0.12
SYVN1-207ENST00000526121 KCNA6P17658 529 aa15.77■□□□□ 0.12
SYVN1-207ENST00000526121 KANK1Q14678 1352 aa15.76■□□□□ 0.11
SYVN1-207ENST00000526121 NWD1Q149M9 1564 aa15.76■□□□□ 0.11
SYVN1-207ENST00000526121 SETD1AO15047 1707 aaKnown RBP15.76■□□□□ 0.11
SYVN1-207ENST00000526121 NKTRP30414 1462 aaKnown RBP15.76■□□□□ 0.11
SYVN1-207ENST00000526121 TET3O43151 1660 aa15.76■□□□□ 0.11
SYVN1-207ENST00000526121 PROSER2Q86WR7 435 aaPredicted RBP15.75■□□□□ 0.11
SYVN1-207ENST00000526121 PHLPP1O60346 1717 aa15.74■□□□□ 0.11
SYVN1-207ENST00000526121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.113e-6■■□□□ 11.7
SYVN1-207ENST00000526121 LMTK2Q8IWU2 1503 aa15.73■□□□□ 0.11
SYVN1-207ENST00000526121 RRP7BPQ9NSQ0 103 aa15.73■□□□□ 0.11
SYVN1-207ENST00000526121 MSH6P52701 1360 aa15.73■□□□□ 0.11
SYVN1-207ENST00000526121 ADGRB3O60242 1522 aa15.73■□□□□ 0.11
SYVN1-207ENST00000526121 ABCC5O15440 1437 aa15.72■□□□□ 0.11
SYVN1-207ENST00000526121 IDI1Q13907 227 aa15.72■□□□□ 0.11
SYVN1-207ENST00000526121 KANK4Q5T7N3 995 aaPredicted RBP15.72■□□□□ 0.11
SYVN1-207ENST00000526121 SLC26A8Q96RN1 970 aa15.72■□□□□ 0.11
SYVN1-207ENST00000526121 PTPN23Q9H3S7 1636 aa15.71■□□□□ 0.11
SYVN1-207ENST00000526121 JCADQ9P266 1359 aa15.71■□□□□ 0.11
SYVN1-207ENST00000526121 RBM33Q96EV2 1170 aaKnown RBP15.7■□□□□ 0.1
SYVN1-207ENST00000526121 NOS1P29475 1434 aa15.69■□□□□ 0.1
SYVN1-207ENST00000526121 DAPK1P53355 1430 aa15.68■□□□□ 0.1
SYVN1-207ENST00000526121 CHD2O14647 1828 aaKnown RBP15.68■□□□□ 0.1
SYVN1-207ENST00000526121 SLAIN2Q9P270 581 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms