RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 GPR37O15354 613 aa11.04□□□□□ -0.64
ATM-208ENST00000525537 KHSRPQ92945 711 aaKnown RBP eCLIP11.03□□□□□ -0.64
ATM-208ENST00000525537 FAM117AQ9C073 453 aa11.01□□□□□ -0.65
ATM-208ENST00000525537 PODXL2Q9NZ53 605 aa11.01□□□□□ -0.65
ATM-208ENST00000525537 DSG2Q14126 1118 aa11□□□□□ -0.65
ATM-208ENST00000525537 MINK1Q8N4C8 1332 aaPredicted RBP11□□□□□ -0.65
ATM-208ENST00000525537 DDRGK1Q96HY6 314 aa10.98□□□□□ -0.65
ATM-208ENST00000525537 FOXK1P85037 733 aa10.97□□□□□ -0.65
ATM-208ENST00000525537 MAP2K5Q13163 448 aa10.97□□□□□ -0.65
ATM-208ENST00000525537 HCSTQ9UBK5 93 aa10.97□□□□□ -0.65
ATM-208ENST00000525537 PBX2P40425 430 aa10.96□□□□□ -0.65
ATM-208ENST00000525537 PLEKHG3A1L390 1219 aa10.95□□□□□ -0.66
ATM-208ENST00000525537 AMHR2Q16671 573 aa10.95□□□□□ -0.66
ATM-208ENST00000525537 POTEEQ6S8J3 1075 aa10.94□□□□□ -0.66
ATM-208ENST00000525537 CCDC102AQ96A19 550 aa10.94□□□□□ -0.66
ATM-208ENST00000525537 IRF6O14896 467 aa10.93□□□□□ -0.66
ATM-208ENST00000525537 TMC2Q8TDI7 906 aa10.93□□□□□ -0.66
ATM-208ENST00000525537 FLIIQ13045 1269 aa10.92□□□□□ -0.66
ATM-208ENST00000525537 NUTM2FA1L443 756 aa10.91□□□□□ -0.66
ATM-208ENST00000525537 PARP9Q8IXQ6 854 aa10.91□□□□□ -0.66
ATM-208ENST00000525537 AXIN2Q9Y2T1 843 aa10.91□□□□□ -0.66
ATM-208ENST00000525537 C1orf115Q9H7X2 142 aa10.9□□□□□ -0.66
ATM-208ENST00000525537 GRXCR2A6NFK2 248 aa10.89□□□□□ -0.67
ATM-208ENST00000525537 GNPATO15228 680 aa10.89□□□□□ -0.67
ATM-208ENST00000525537 GOPCQ9HD26 462 aa10.89□□□□□ -0.67
ATM-208ENST00000525537 NUDT7P0C024 238 aa10.88□□□□□ -0.67
ATM-208ENST00000525537 PLPP6Q8IY26 295 aa10.88□□□□□ -0.67
ATM-208ENST00000525537 ARID3AQ99856 593 aa10.88□□□□□ -0.67
ATM-208ENST00000525537 HIC1Q14526 733 aa10.87□□□□□ -0.67
ATM-208ENST00000525537 MAP3K9P80192 1104 aa10.86□□□□□ -0.67
ATM-208ENST00000525537 TRIM26Q12899 539 aaPredicted RBP10.86□□□□□ -0.67
ATM-208ENST00000525537 LHX6Q9UPM6 363 aa10.86□□□□□ -0.67
ATM-208ENST00000525537 OSBPP22059 807 aa10.85□□□□□ -0.67
ATM-208ENST00000525537 FCHSD2O94868 740 aa10.84□□□□□ -0.67
ATM-208ENST00000525537 KIF3CO14782 793 aa10.83□□□□□ -0.68
ATM-208ENST00000525537 ONECUT3O60422 494 aaPredicted RBP10.83□□□□□ -0.68
ATM-208ENST00000525537 ADGRD1Q6QNK2 874 aa10.83□□□□□ -0.68
ATM-208ENST00000525537 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
ATM-208ENST00000525537 APBB1O00213 710 aa10.82□□□□□ -0.68
ATM-208ENST00000525537 ARID3CA6NKF2 412 aa10.81□□□□□ -0.68
ATM-208ENST00000525537 FECHP22830 423 aa10.81□□□□□ -0.68
ATM-208ENST00000525537 TTLL12Q14166 644 aaPredicted RBP10.8□□□□□ -0.68
ATM-208ENST00000525537 PCDHGA4Q9Y5G9 962 aa10.79□□□□□ -0.68
ATM-208ENST00000525537 A6NJR5 290 aa10.78□□□□□ -0.68
ATM-208ENST00000525537 SLC34A2O95436 690 aa10.78□□□□□ -0.68
ATM-208ENST00000525537 HRCP23327 699 aa10.78□□□□□ -0.68
ATM-208ENST00000525537 ARHGAP33O14559 1287 aa10.77□□□□□ -0.69
ATM-208ENST00000525537 RANGAP1P46060 587 aaPredicted RBP10.77□□□□□ -0.69
ATM-208ENST00000525537 GIGYF2Q6Y7W6 1299 aaKnown RBP10.76□□□□□ -0.69
ATM-208ENST00000525537 PCMTD1Q96MG8 357 aaPredicted RBP10.76□□□□□ -0.69
ATM-208ENST00000525537 HRO43593 1189 aa10.75□□□□□ -0.69
ATM-208ENST00000525537 PTGDRQ13258 359 aa10.75□□□□□ -0.69
ATM-208ENST00000525537 OXER1Q8TDS5 423 aa10.75□□□□□ -0.69
ATM-208ENST00000525537 DDX12PQ92771 950 aa10.75□□□□□ -0.69
ATM-208ENST00000525537 UPF1Q92900 1129 aaKnown RBP eCLIP10.75□□□□□ -0.69
ATM-208ENST00000525537 MS4A1P11836 297 aa10.74□□□□□ -0.69
ATM-208ENST00000525537 TK2O00142 265 aa10.73□□□□□ -0.69
ATM-208ENST00000525537 TRAK2O60296 914 aa10.73□□□□□ -0.69
ATM-208ENST00000525537 TBC1D12O60347 775 aa10.71□□□□□ -0.69
ATM-208ENST00000525537 CLUAP1Q96AJ1 413 aa10.71□□□□□ -0.69
ATM-208ENST00000525537 PRIM1P49642 420 aaKnown RBP10.7□□□□□ -0.7
ATM-208ENST00000525537 SH3D19Q5HYK7 790 aa10.7□□□□□ -0.7
ATM-208ENST00000525537 KCTD12Q96CX2 325 aaKnown RBP10.7□□□□□ -0.7
ATM-208ENST00000525537 PSDA5PKW4 1024 aaPredicted RBP10.69□□□□□ -0.7
ATM-208ENST00000525537 DMRTA1Q5VZB9 504 aa10.69□□□□□ -0.7
ATM-208ENST00000525537 REPIN1Q9BWE0 567 aaKnown RBP10.69□□□□□ -0.7
ATM-208ENST00000525537 EVI5O60447 810 aa10.68□□□□□ -0.7
ATM-208ENST00000525537 RGS20O76081 388 aa10.68□□□□□ -0.7
ATM-208ENST00000525537 MCM6Q14566 821 aa10.68□□□□□ -0.7
ATM-208ENST00000525537 CCDC82Q8N4S0 544 aa10.68□□□□□ -0.7
ATM-208ENST00000525537 TMUB1Q9BVT8 246 aa10.68□□□□□ -0.7
ATM-208ENST00000525537 PDIA4P13667 645 aaKnown RBP10.67□□□□□ -0.7
ATM-208ENST00000525537 PSEN2P49810 448 aa10.67□□□□□ -0.7
ATM-208ENST00000525537 CLCN1P35523 988 aa10.66□□□□□ -0.7
ATM-208ENST00000525537 IRX2Q9BZI1 471 aaPredicted RBP10.66□□□□□ -0.7
ATM-208ENST00000525537 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
ATM-208ENST00000525537 SKIV2LQ15477 1246 aaKnown RBP10.63□□□□□ -0.71
ATM-208ENST00000525537 GPCPD1Q9NPB8 672 aa10.63□□□□□ -0.71
ATM-208ENST00000525537 IFFO2Q5TF58 517 aa10.62□□□□□ -0.71
ATM-208ENST00000525537 ZBTB7CA1YPR0 619 aa10.61□□□□□ -0.71
ATM-208ENST00000525537 PROSER2Q86WR7 435 aaPredicted RBP10.61□□□□□ -0.71
ATM-208ENST00000525537 NPDC1Q9NQX5 325 aaPredicted RBP10.61□□□□□ -0.71
ATM-208ENST00000525537 MDM2Q00987 491 aaPredicted RBP10.6□□□□□ -0.71
ATM-208ENST00000525537 NPM2Q86SE8 214 aaKnown RBP10.6□□□□□ -0.71
ATM-208ENST00000525537 ANO8Q9HCE9 1232 aaPredicted RBP10.6□□□□□ -0.71
ATM-208ENST00000525537 SSTR3P32745 418 aaPredicted RBP10.59□□□□□ -0.71
ATM-208ENST00000525537 EN1Q05925 392 aaPredicted RBP10.59□□□□□ -0.71
ATM-208ENST00000525537 PTCD2Q8WV60 388 aaKnown RBP10.59□□□□□ -0.71
ATM-208ENST00000525537 STAC3Q96MF2 364 aa10.59□□□□□ -0.71
ATM-208ENST00000525537 CDHR5Q9HBB8 845 aa10.59□□□□□ -0.71
ATM-208ENST00000525537 EPAS1Q99814 870 aa10.58□□□□□ -0.72
ATM-208ENST00000525537 PTPN5P54829 565 aa10.57□□□□□ -0.72
ATM-208ENST00000525537 FNBP4Q8N3X1 1017 aaPredicted RBP10.57□□□□□ -0.72
ATM-208ENST00000525537 PHOX2BQ99453 314 aa10.57□□□□□ -0.72
ATM-208ENST00000525537 A0A0G2JS52 829 aa10.56□□□□□ -0.72
ATM-208ENST00000525537 RAD21O60216 631 aa10.56□□□□□ -0.72
ATM-208ENST00000525537 PHF14O94880 888 aa10.56□□□□□ -0.72
ATM-208ENST00000525537 BEGAINQ9BUH8 593 aa10.56□□□□□ -0.72
ATM-208ENST00000525537 PPP4R3BQ5MIZ7 849 aa10.55□□□□□ -0.72
ATM-208ENST00000525537 ZNF777Q9ULD5 760 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms