RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 GGT6Q6P531 493 aa18.29■□□□□ 0.52
GPATCH4-212ENST00000525375 CEBPAP49715 358 aaPredicted RBP18.28■□□□□ 0.52
GPATCH4-212ENST00000525375 ERBINQ96RT1 1412 aa18.27■□□□□ 0.52
GPATCH4-212ENST00000525375 ANKRD30AQ9BXX3 1397 aa18.27■□□□□ 0.51
GPATCH4-212ENST00000525375 MROH2AA6NES4 1674 aa18.26■□□□□ 0.51
GPATCH4-212ENST00000525375 DEPDC5O75140 1603 aa18.25■□□□□ 0.51
GPATCH4-212ENST00000525375 PRDM15P57071 1507 aaPredicted RBP18.24■□□□□ 0.51
GPATCH4-212ENST00000525375 KDM5DQ9BY66 1539 aa18.24■□□□□ 0.51
GPATCH4-212ENST00000525375 CEP152O94986 1710 aa18.24■□□□□ 0.51
GPATCH4-212ENST00000525375 ABCC3O15438 1527 aa18.23■□□□□ 0.51
GPATCH4-212ENST00000525375 CNTLNQ9NXG0 1405 aa18.22■□□□□ 0.51
GPATCH4-212ENST00000525375 ROCK1Q13464 1354 aa18.21■□□□□ 0.51
GPATCH4-212ENST00000525375 ANKRD50Q9ULJ7 1429 aa18.2■□□□□ 0.5
GPATCH4-212ENST00000525375 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
GPATCH4-212ENST00000525375 LMTK3Q96Q04 1460 aa18.19■□□□□ 0.5
GPATCH4-212ENST00000525375 ZC3H13Q5T200 1668 aaKnown RBP18.18■□□□□ 0.5
GPATCH4-212ENST00000525375 VWDEQ8N2E2 1590 aa18.18■□□□□ 0.5
GPATCH4-212ENST00000525375 FAM135AQ9P2D6 1515 aa18.18■□□□□ 0.5
GPATCH4-212ENST00000525375 CAMSAP1Q5T5Y3 1602 aa18.17■□□□□ 0.5
GPATCH4-212ENST00000525375 UNC13BO14795 1591 aa18.17■□□□□ 0.5
GPATCH4-212ENST00000525375 GCC2Q8IWJ2 1684 aa18.16■□□□□ 0.5
GPATCH4-212ENST00000525375 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
GPATCH4-212ENST00000525375 PREX1Q8TCU6 1659 aa18.15■□□□□ 0.5
GPATCH4-212ENST00000525375 NAIPQ13075 1403 aa18.15■□□□□ 0.5
GPATCH4-212ENST00000525375 WASHC2CQ9Y4E1 1318 aa18.14■□□□□ 0.49
GPATCH4-212ENST00000525375 PZPP20742 1482 aa18.14■□□□□ 0.49
GPATCH4-212ENST00000525375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.492e-10■■■■■ 32.9
GPATCH4-212ENST00000525375 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
GPATCH4-212ENST00000525375 MYO3AQ8NEV4 1616 aa18.12■□□□□ 0.49
GPATCH4-212ENST00000525375 FBXO31Q5XUX0 539 aaPredicted RBP18.12■□□□□ 0.49
GPATCH4-212ENST00000525375 LMTK2Q8IWU2 1503 aa18.11■□□□□ 0.49
GPATCH4-212ENST00000525375 NPATQ14207 1427 aa18.1■□□□□ 0.49
GPATCH4-212ENST00000525375 HFM1A2PYH4 1435 aa18.09■□□□□ 0.49
GPATCH4-212ENST00000525375 EFCAB6Q5THR3 1501 aa18.08■□□□□ 0.49
GPATCH4-212ENST00000525375 HSPA2P54652 639 aa18.08■□□□□ 0.48
GPATCH4-212ENST00000525375 SPATA31D1Q6ZQQ2 1576 aa18.08■□□□□ 0.48
GPATCH4-212ENST00000525375 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
GPATCH4-212ENST00000525375 IQGAP3Q86VI3 1631 aa18.07■□□□□ 0.48
GPATCH4-212ENST00000525375 UHRF1BP1Q6BDS2 1440 aa18.06■□□□□ 0.48
GPATCH4-212ENST00000525375 ZNF142P52746 1687 aaPredicted RBP18.06■□□□□ 0.48
GPATCH4-212ENST00000525375 TET3O43151 1660 aa18.05■□□□□ 0.48
GPATCH4-212ENST00000525375 CEP170BQ9Y4F5 1589 aaPredicted RBP18.04■□□□□ 0.48
GPATCH4-212ENST00000525375 ARHGAP31Q2M1Z3 1444 aa18.04■□□□□ 0.48
GPATCH4-212ENST00000525375 KANK1Q14678 1352 aa18.04■□□□□ 0.48
GPATCH4-212ENST00000525375 CFAP65Q6ZU64 1925 aaKnown RBP18.04■□□□□ 0.48
GPATCH4-212ENST00000525375 TNRQ92752 1358 aa18.04■□□□□ 0.48
GPATCH4-212ENST00000525375 E9PCH4 1651 aa18.03■□□□□ 0.48
GPATCH4-212ENST00000525375 SYNMO15061 1565 aa18.02■□□□□ 0.48
GPATCH4-212ENST00000525375 SETD1BQ9UPS6 1966 aaKnown RBP18.02■□□□□ 0.47
GPATCH4-212ENST00000525375 NUP155O75694 1391 aa18■□□□□ 0.47
GPATCH4-212ENST00000525375 A2ML1A8K2U0 1454 aa17.98■□□□□ 0.47
GPATCH4-212ENST00000525375 STRCQ7RTU9 1775 aa17.98■□□□□ 0.47
GPATCH4-212ENST00000525375 NOS1P29475 1434 aa17.97■□□□□ 0.47
GPATCH4-212ENST00000525375 UGGT1Q9NYU2 1555 aa17.96■□□□□ 0.47
GPATCH4-212ENST00000525375 PIK3C2BO00750 1634 aa17.95■□□□□ 0.46
GPATCH4-212ENST00000525375 UBR1Q8IWV7 1749 aa17.94■□□□□ 0.46
GPATCH4-212ENST00000525375 NLRP1Q9C000 1473 aa17.94■□□□□ 0.46
GPATCH4-212ENST00000525375 RPRD2Q5VT52 1461 aaKnown RBP17.93■□□□□ 0.46
GPATCH4-212ENST00000525375 SETD5Q9C0A6 1442 aa17.92■□□□□ 0.46
GPATCH4-212ENST00000525375 RAB3GAP2Q9H2M9 1393 aa17.91■□□□□ 0.46
GPATCH4-212ENST00000525375 SPHKAPQ2M3C7 1700 aa17.89■□□□□ 0.45
GPATCH4-212ENST00000525375 NEURL4Q96JN8 1562 aa17.88■□□□□ 0.45
GPATCH4-212ENST00000525375 TRIM52Q96A61 297 aa17.88■□□□□ 0.45
GPATCH4-212ENST00000525375 PLA2R1Q13018 1463 aa17.88■□□□□ 0.45
GPATCH4-212ENST00000525375 ADGRB3O60242 1522 aa17.87■□□□□ 0.45
GPATCH4-212ENST00000525375 IDI1Q13907 227 aa17.86■□□□□ 0.45
GPATCH4-212ENST00000525375 NCKAP5LQ9HCH0 1330 aa17.86■□□□□ 0.45
GPATCH4-212ENST00000525375 MYO5BQ9ULV0 1848 aa17.86■□□□□ 0.45
GPATCH4-212ENST00000525375 PTPRTO14522 1441 aa17.85■□□□□ 0.45
GPATCH4-212ENST00000525375 POLR1AO95602 1720 aaPredicted RBP17.85■□□□□ 0.45
GPATCH4-212ENST00000525375 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
GPATCH4-212ENST00000525375 FOXD1Q16676 465 aa17.84■□□□□ 0.45
GPATCH4-212ENST00000525375 TRPM2O94759 1503 aa17.83■□□□□ 0.45
GPATCH4-212ENST00000525375 TMEM131LA2VDJ0 1609 aa17.83■□□□□ 0.44
GPATCH4-212ENST00000525375 ARHGAP23Q9P227 1491 aa17.82■□□□□ 0.44
GPATCH4-212ENST00000525375 PKD2Q13563 968 aa17.82■□□□□ 0.44
GPATCH4-212ENST00000525375 KDM5AP29375 1690 aaKnown RBP17.82■□□□□ 0.44
GPATCH4-212ENST00000525375 SLC4A1APQ9BWU0 796 aaKnown RBP17.81■□□□□ 0.44
GPATCH4-212ENST00000525375 SLIT1O75093 1534 aa17.81■□□□□ 0.44
GPATCH4-212ENST00000525375 MPHOSPH9Q99550 1183 aa17.78■□□□□ 0.44
GPATCH4-212ENST00000525375 THEMISQ8N1K5 641 aaPredicted RBP17.77■□□□□ 0.44
GPATCH4-212ENST00000525375 SLC52A1Q9NWF4 448 aa17.77■□□□□ 0.44
GPATCH4-212ENST00000525375 LTKP29376 864 aa17.76■□□□□ 0.43
GPATCH4-212ENST00000525375 TMEM2Q9UHN6 1383 aa17.76■□□□□ 0.43
GPATCH4-212ENST00000525375 ZFYVE9O95405 1425 aa17.75■□□□□ 0.43
GPATCH4-212ENST00000525375 MED14O60244 1454 aa17.75■□□□□ 0.43
GPATCH4-212ENST00000525375 SCAF11Q99590 1463 aaKnown RBP17.75■□□□□ 0.43
GPATCH4-212ENST00000525375 IQGAP1P46940 1657 aa17.74■□□□□ 0.43
GPATCH4-212ENST00000525375 NPHP4O75161 1426 aaPredicted RBP17.73■□□□□ 0.43
GPATCH4-212ENST00000525375 CHGAP10645 457 aaKnown RBP17.72■□□□□ 0.43
GPATCH4-212ENST00000525375 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
GPATCH4-212ENST00000525375 RIMS2Q9UQ26 1411 aa17.71■□□□□ 0.43
GPATCH4-212ENST00000525375 LTBP4Q8N2S1 1624 aa17.7■□□□□ 0.42
GPATCH4-212ENST00000525375 ANKLE2Q86XL3 938 aa17.7■□□□□ 0.42
GPATCH4-212ENST00000525375 TRIM26Q12899 539 aaPredicted RBP17.69■□□□□ 0.42
GPATCH4-212ENST00000525375 NUTM2DQ5VT03 806 aaPredicted RBP17.69■□□□□ 0.42
GPATCH4-212ENST00000525375 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
GPATCH4-212ENST00000525375 KIF1BO60333 1816 aa17.69■□□□□ 0.42
GPATCH4-212ENST00000525375 NEXMIFQ5QGS0 1516 aa17.68■□□□□ 0.42
GPATCH4-212ENST00000525375 TXNDC2Q86VQ3 553 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms