RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 ACIN1Q9UKV3 1341 aaKnown RBP21.03■□□□□ 0.96
UBXN1-205ENST00000525004 UNC13BO14795 1591 aa21.02■□□□□ 0.95
UBXN1-205ENST00000525004 PRDM15P57071 1507 aaPredicted RBP21■□□□□ 0.95
UBXN1-205ENST00000525004 ARID4BQ4LE39 1312 aaPredicted RBP21■□□□□ 0.95
UBXN1-205ENST00000525004 FAM135AQ9P2D6 1515 aa20.99■□□□□ 0.95
UBXN1-205ENST00000525004 RAB3GAP2Q9H2M9 1393 aa20.99■□□□□ 0.95
UBXN1-205ENST00000525004 VWDEQ8N2E2 1590 aa20.99■□□□□ 0.95
UBXN1-205ENST00000525004 PCGF6Q9BYE7 350 aa20.99■□□□□ 0.95
UBXN1-205ENST00000525004 ADAMTSL3P82987 1691 aa20.99■□□□□ 0.95
UBXN1-205ENST00000525004 KDM5DQ9BY66 1539 aa20.99■□□□□ 0.95
UBXN1-205ENST00000525004 GGT6Q6P531 493 aa20.97■□□□□ 0.95
UBXN1-205ENST00000525004 IQGAP3Q86VI3 1631 aa20.93■□□□□ 0.94
UBXN1-205ENST00000525004 ZC3H13Q5T200 1668 aaKnown RBP20.93■□□□□ 0.94
UBXN1-205ENST00000525004 LMTK2Q8IWU2 1503 aa20.93■□□□□ 0.94
UBXN1-205ENST00000525004 MLECQ14165 292 aa20.92■□□□□ 0.94
UBXN1-205ENST00000525004 FER1L4A9Z1Z3 1794 aa20.91■□□□□ 0.94
UBXN1-205ENST00000525004 KANK1Q14678 1352 aa20.91■□□□□ 0.94
UBXN1-205ENST00000525004 ABCC3O15438 1527 aa20.9■□□□□ 0.94
UBXN1-205ENST00000525004 CNTLNQ9NXG0 1405 aa20.9■□□□□ 0.94
UBXN1-205ENST00000525004 NUP155O75694 1391 aa20.9■□□□□ 0.94
UBXN1-205ENST00000525004 CEP152O94986 1710 aa20.9■□□□□ 0.94
UBXN1-205ENST00000525004 WASHC2CQ9Y4E1 1318 aa20.89■□□□□ 0.93
UBXN1-205ENST00000525004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.93
UBXN1-205ENST00000525004 MROH2AA6NES4 1674 aa20.89■□□□□ 0.93
UBXN1-205ENST00000525004 MADDQ8WXG6 1647 aa20.89■□□□□ 0.93
UBXN1-205ENST00000525004 CLTCQ00610 1675 aaKnown RBP20.88■□□□□ 0.93
UBXN1-205ENST00000525004 PZPP20742 1482 aa20.87■□□□□ 0.93
UBXN1-205ENST00000525004 TET3O43151 1660 aa20.86■□□□□ 0.93
UBXN1-205ENST00000525004 KDM4FA0A1W2PPD8 638 aa20.86■□□□□ 0.93
UBXN1-205ENST00000525004 ARHGAP31Q2M1Z3 1444 aa20.86■□□□□ 0.93
UBXN1-205ENST00000525004 TRIM52Q96A61 297 aa20.85■□□□□ 0.93
UBXN1-205ENST00000525004 CAMSAP1Q5T5Y3 1602 aa20.84■□□□□ 0.93
UBXN1-205ENST00000525004 ZMYM3Q14202 1370 aa20.84■□□□□ 0.93
UBXN1-205ENST00000525004 RIMS1Q86UR5 1692 aaKnown RBP20.83■□□□□ 0.92
UBXN1-205ENST00000525004 ESF1Q9H501 851 aaKnown RBP20.82■□□□□ 0.92
UBXN1-205ENST00000525004 EFCAB6Q5THR3 1501 aa20.82■□□□□ 0.92
UBXN1-205ENST00000525004 MPHOSPH9Q99550 1183 aa20.81■□□□□ 0.92
UBXN1-205ENST00000525004 E9PCH4 1651 aa20.8■□□□□ 0.92
UBXN1-205ENST00000525004 C3P01024 1663 aa20.8■□□□□ 0.92
UBXN1-205ENST00000525004 RPRD2Q5VT52 1461 aaKnown RBP20.8■□□□□ 0.92
UBXN1-205ENST00000525004 CFAP65Q6ZU64 1925 aaKnown RBP20.8■□□□□ 0.92
UBXN1-205ENST00000525004 SLC4A1APQ9BWU0 796 aaKnown RBP20.79■□□□□ 0.92
UBXN1-205ENST00000525004 SETD1BQ9UPS6 1966 aaKnown RBP20.79■□□□□ 0.92
UBXN1-205ENST00000525004 NPATQ14207 1427 aa20.78■□□□□ 0.92
UBXN1-205ENST00000525004 PTPRMP28827 1452 aa20.77■□□□□ 0.92
UBXN1-205ENST00000525004 PKD2Q13563 968 aa20.74■□□□□ 0.91
UBXN1-205ENST00000525004 NOS1P29475 1434 aa20.73■□□□□ 0.91
UBXN1-205ENST00000525004 PREX1Q8TCU6 1659 aa20.73■□□□□ 0.91
UBXN1-205ENST00000525004 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
UBXN1-205ENST00000525004 PTPRTO14522 1441 aa20.72■□□□□ 0.91
UBXN1-205ENST00000525004 CEBPAP49715 358 aaPredicted RBP20.72■□□□□ 0.91
UBXN1-205ENST00000525004 DHX57Q6P158 1386 aaKnown RBP20.72■□□□□ 0.91
UBXN1-205ENST00000525004 ERVK-7P63135 1459 aa20.7■□□□□ 0.9
UBXN1-205ENST00000525004 FBXO31Q5XUX0 539 aaPredicted RBP20.7■□□□□ 0.9
UBXN1-205ENST00000525004 SPHKAPQ2M3C7 1700 aa20.69■□□□□ 0.9
UBXN1-205ENST00000525004 PLA2R1Q13018 1463 aa20.69■□□□□ 0.9
UBXN1-205ENST00000525004 SYNMO15061 1565 aa20.65■□□□□ 0.9
UBXN1-205ENST00000525004 ANKRD30BQ9BXX2 1392 aa20.65■□□□□ 0.9
UBXN1-205ENST00000525004 FOXD1Q16676 465 aa20.65■□□□□ 0.9
UBXN1-205ENST00000525004 PIK3C2BO00750 1634 aa20.64■□□□□ 0.89
UBXN1-205ENST00000525004 TRPM2O94759 1503 aa20.63■□□□□ 0.89
UBXN1-205ENST00000525004 SLC52A1Q9NWF4 448 aa20.63■□□□□ 0.89
UBXN1-205ENST00000525004 TNRQ92752 1358 aa20.62■□□□□ 0.89
UBXN1-205ENST00000525004 NLRP1Q9C000 1473 aa20.59■□□□□ 0.89
UBXN1-205ENST00000525004 IDI1Q13907 227 aa20.58■□□□□ 0.89
UBXN1-205ENST00000525004 KDM5AP29375 1690 aaKnown RBP20.58■□□□□ 0.88
UBXN1-205ENST00000525004 CLTCL1P53675 1640 aa20.56■□□□□ 0.88
UBXN1-205ENST00000525004 MYO3AQ8NEV4 1616 aa20.56■□□□□ 0.88
UBXN1-205ENST00000525004 CLSPNQ9HAW4 1339 aa20.56■□□□□ 0.88
UBXN1-205ENST00000525004 PLPPR3Q6T4P5 718 aa20.55■□□□□ 0.88
UBXN1-205ENST00000525004 UGGT1Q9NYU2 1555 aa20.55■□□□□ 0.88
UBXN1-205ENST00000525004 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
UBXN1-205ENST00000525004 KIF1BO60333 1816 aa20.54■□□□□ 0.88
UBXN1-205ENST00000525004 CCDC144AA2RUR9 1427 aa20.53■□□□□ 0.88
UBXN1-205ENST00000525004 A2ML1A8K2U0 1454 aa20.53■□□□□ 0.88
UBXN1-205ENST00000525004 NEURL4Q96JN8 1562 aa20.53■□□□□ 0.88
UBXN1-205ENST00000525004 TMEM131LA2VDJ0 1609 aa20.52■□□□□ 0.88
UBXN1-205ENST00000525004 CEP170BQ9Y4F5 1589 aaPredicted RBP20.51■□□□□ 0.87
UBXN1-205ENST00000525004 UBR1Q8IWV7 1749 aa20.51■□□□□ 0.87
UBXN1-205ENST00000525004 UHRF1BP1Q6BDS2 1440 aa20.51■□□□□ 0.87
UBXN1-205ENST00000525004 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
UBXN1-205ENST00000525004 SPATA31E1Q6ZUB1 1445 aa20.49■□□□□ 0.87
UBXN1-205ENST00000525004 ADGRB3O60242 1522 aa20.48■□□□□ 0.87
UBXN1-205ENST00000525004 LMTK3Q96Q04 1460 aa20.46■□□□□ 0.87
UBXN1-205ENST00000525004 CCER1Q8TC90 406 aaPredicted RBP20.46■□□□□ 0.87
UBXN1-205ENST00000525004 SIN3AQ96ST3 1273 aa20.46■□□□□ 0.87
UBXN1-205ENST00000525004 THEMISQ8N1K5 641 aaPredicted RBP20.44■□□□□ 0.86
UBXN1-205ENST00000525004 SLIT1O75093 1534 aa20.43■□□□□ 0.86
UBXN1-205ENST00000525004 ARHGAP23Q9P227 1491 aa20.42■□□□□ 0.86
UBXN1-205ENST00000525004 RPGRIP1LQ68CZ1 1315 aa20.4■□□□□ 0.86
UBXN1-205ENST00000525004 STAG3Q9UJ98 1225 aa20.4■□□□□ 0.86
UBXN1-205ENST00000525004 TMEM2Q9UHN6 1383 aa20.39■□□□□ 0.85
UBXN1-205ENST00000525004 IFT172Q9UG01 1749 aa20.39■□□□□ 0.85
UBXN1-205ENST00000525004 ZFYVE9O95405 1425 aa20.38■□□□□ 0.85
UBXN1-205ENST00000525004 PPLO60437 1756 aa20.38■□□□□ 0.85
UBXN1-205ENST00000525004 CHGAP10645 457 aaKnown RBP20.37■□□□□ 0.85
UBXN1-205ENST00000525004 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
UBXN1-205ENST00000525004 STAC3Q96MF2 364 aa20.36■□□□□ 0.85
UBXN1-205ENST00000525004 NEXMIFQ5QGS0 1516 aa20.36■□□□□ 0.85
UBXN1-205ENST00000525004 RGL3Q3MIN7 710 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms