RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 RNF17Q9BXT8 1623 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-213ENST00000524895 AGLP35573 1532 aa23.46■■□□□ 1.35
TSPAN4-213ENST00000524895 SIGLEC1Q9BZZ2 1709 aa23.44■■□□□ 1.34
TSPAN4-213ENST00000524895 PRDM15P57071 1507 aaPredicted RBP23.43■■□□□ 1.34
TSPAN4-213ENST00000524895 KDM5DQ9BY66 1539 aa23.43■■□□□ 1.34
TSPAN4-213ENST00000524895 NUP155O75694 1391 aa23.42■■□□□ 1.34
TSPAN4-213ENST00000524895 MROH1Q8NDA8 1641 aa23.42■■□□□ 1.34
TSPAN4-213ENST00000524895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.42■■□□□ 1.34
TSPAN4-213ENST00000524895 KANK1Q14678 1352 aa23.4■■□□□ 1.34
TSPAN4-213ENST00000524895 IQGAP3Q86VI3 1631 aa23.4■■□□□ 1.34
TSPAN4-213ENST00000524895 PZPP20742 1482 aa23.38■■□□□ 1.33
TSPAN4-213ENST00000524895 DHX57Q6P158 1386 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-213ENST00000524895 FAM135AQ9P2D6 1515 aa23.38■■□□□ 1.33
TSPAN4-213ENST00000524895 ARID4BQ4LE39 1312 aaPredicted RBP23.37■■□□□ 1.33
TSPAN4-213ENST00000524895 GGT6Q6P531 493 aa23.37■■□□□ 1.33
TSPAN4-213ENST00000524895 VWDEQ8N2E2 1590 aa23.35■■□□□ 1.33
TSPAN4-213ENST00000524895 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-213ENST00000524895 CCER1Q8TC90 406 aaPredicted RBP23.33■■□□□ 1.33
TSPAN4-213ENST00000524895 MPHOSPH9Q99550 1183 aa23.33■■□□□ 1.33
TSPAN4-213ENST00000524895 ZC3H13Q5T200 1668 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-213ENST00000524895 CEP152O94986 1710 aa23.31■■□□□ 1.32
TSPAN4-213ENST00000524895 ABCC3O15438 1527 aa23.3■■□□□ 1.32
TSPAN4-213ENST00000524895 TET3O43151 1660 aa23.3■■□□□ 1.32
TSPAN4-213ENST00000524895 MLECQ14165 292 aa23.3■■□□□ 1.32
TSPAN4-213ENST00000524895 LMTK2Q8IWU2 1503 aa23.29■■□□□ 1.32
TSPAN4-213ENST00000524895 WASHC2CQ9Y4E1 1318 aa23.28■■□□□ 1.32
TSPAN4-213ENST00000524895 PPP6R1Q9UPN7 881 aa23.26■■□□□ 1.31
TSPAN4-213ENST00000524895 EFCAB6Q5THR3 1501 aa23.26■■□□□ 1.31
TSPAN4-213ENST00000524895 PKD2Q13563 968 aa23.25■■□□□ 1.31
TSPAN4-213ENST00000524895 CAMSAP1Q5T5Y3 1602 aa23.25■■□□□ 1.31
TSPAN4-213ENST00000524895 CLTCQ00610 1675 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-213ENST00000524895 ESF1Q9H501 851 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-213ENST00000524895 E9PCH4 1651 aa23.22■■□□□ 1.31
TSPAN4-213ENST00000524895 FOXD1Q16676 465 aa23.2■■□□□ 1.3
TSPAN4-213ENST00000524895 CLSPNQ9HAW4 1339 aa23.19■■□□□ 1.3
TSPAN4-213ENST00000524895 FER1L4A9Z1Z3 1794 aa23.19■■□□□ 1.3
TSPAN4-213ENST00000524895 CNTLNQ9NXG0 1405 aa23.18■■□□□ 1.3
TSPAN4-213ENST00000524895 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-213ENST00000524895 NPATQ14207 1427 aa23.16■■□□□ 1.3
TSPAN4-213ENST00000524895 ARHGAP31Q2M1Z3 1444 aa23.16■■□□□ 1.3
TSPAN4-213ENST00000524895 MROH2AA6NES4 1674 aa23.15■■□□□ 1.3
TSPAN4-213ENST00000524895 MADDQ8WXG6 1647 aa23.13■■□□□ 1.29
TSPAN4-213ENST00000524895 SPHKAPQ2M3C7 1700 aa23.13■■□□□ 1.29
TSPAN4-213ENST00000524895 ANKRD30BQ9BXX2 1392 aa23.13■■□□□ 1.29
TSPAN4-213ENST00000524895 ADAMTSL3P82987 1691 aa23.13■■□□□ 1.29
TSPAN4-213ENST00000524895 TRPM2O94759 1503 aa23.1■■□□□ 1.29
TSPAN4-213ENST00000524895 RIMS1Q86UR5 1692 aaKnown RBP23.09■■□□□ 1.29
TSPAN4-213ENST00000524895 PTPRTO14522 1441 aa23.08■■□□□ 1.29
TSPAN4-213ENST00000524895 ZMYM3Q14202 1370 aa23.08■■□□□ 1.29
TSPAN4-213ENST00000524895 PREX1Q8TCU6 1659 aa23.08■■□□□ 1.29
TSPAN4-213ENST00000524895 PLA2R1Q13018 1463 aa23.07■■□□□ 1.28
TSPAN4-213ENST00000524895 CCDC144AA2RUR9 1427 aa23.06■■□□□ 1.28
TSPAN4-213ENST00000524895 ERVK-7P63135 1459 aa23.05■■□□□ 1.28
TSPAN4-213ENST00000524895 C3P01024 1663 aa23.04■■□□□ 1.28
TSPAN4-213ENST00000524895 SIN3AQ96ST3 1273 aa23.04■■□□□ 1.28
TSPAN4-213ENST00000524895 NOS1P29475 1434 aa23.04■■□□□ 1.28
TSPAN4-213ENST00000524895 SYNMO15061 1565 aa23.02■■□□□ 1.28
TSPAN4-213ENST00000524895 SPATA31D1Q6ZQQ2 1576 aa23.02■■□□□ 1.28
TSPAN4-213ENST00000524895 NEUROD1Q13562 356 aa23.02■■□□□ 1.28
TSPAN4-213ENST00000524895 CFAP65Q6ZU64 1925 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-213ENST00000524895 CLTCL1P53675 1640 aa23.01■■□□□ 1.27
TSPAN4-213ENST00000524895 FBXO31Q5XUX0 539 aaPredicted RBP23■■□□□ 1.27
TSPAN4-213ENST00000524895 UGGT1Q9NYU2 1555 aa23■■□□□ 1.27
TSPAN4-213ENST00000524895 PIK3C2BO00750 1634 aa22.97■■□□□ 1.27
TSPAN4-213ENST00000524895 CEBPAP49715 358 aaPredicted RBP22.96■■□□□ 1.27
TSPAN4-213ENST00000524895 PLPPR3Q6T4P5 718 aa22.96■■□□□ 1.27
TSPAN4-213ENST00000524895 TNRQ92752 1358 aa22.94■■□□□ 1.26
TSPAN4-213ENST00000524895 TONSLQ96HA7 1378 aa22.94■■□□□ 1.26
TSPAN4-213ENST00000524895 PTPRMP28827 1452 aa22.93■■□□□ 1.26
TSPAN4-213ENST00000524895 ZEB1P37275 1124 aaPredicted RBP22.93■■□□□ 1.26
TSPAN4-213ENST00000524895 SLC52A1Q9NWF4 448 aa22.92■■□□□ 1.26
TSPAN4-213ENST00000524895 KIF1BO60333 1816 aa22.92■■□□□ 1.26
TSPAN4-213ENST00000524895 ADGRB3O60242 1522 aa22.88■■□□□ 1.25
TSPAN4-213ENST00000524895 NEURL4Q96JN8 1562 aa22.88■■□□□ 1.25
TSPAN4-213ENST00000524895 IDI1Q13907 227 aa22.87■■□□□ 1.25
TSPAN4-213ENST00000524895 TIMELESSQ9UNS1 1208 aa22.87■■□□□ 1.25
TSPAN4-213ENST00000524895 SPATA31E1Q6ZUB1 1445 aa22.87■■□□□ 1.25
TSPAN4-213ENST00000524895 MYO3AQ8NEV4 1616 aa22.86■■□□□ 1.25
TSPAN4-213ENST00000524895 NLRP1Q9C000 1473 aa22.86■■□□□ 1.25
TSPAN4-213ENST00000524895 CHGAP10645 457 aaKnown RBP22.86■■□□□ 1.25
TSPAN4-213ENST00000524895 KDM4FA0A1W2PPD8 638 aa22.85■■□□□ 1.25
TSPAN4-213ENST00000524895 TMEM131LA2VDJ0 1609 aa22.83■■□□□ 1.25
TSPAN4-213ENST00000524895 RGL3Q3MIN7 710 aa22.83■■□□□ 1.25
TSPAN4-213ENST00000524895 STAG3Q9UJ98 1225 aa22.82■■□□□ 1.24
TSPAN4-213ENST00000524895 L3MBTL2Q969R5 705 aa22.81■■□□□ 1.24
TSPAN4-213ENST00000524895 KDM5AP29375 1690 aaKnown RBP22.8■■□□□ 1.24
TSPAN4-213ENST00000524895 ZNF326Q5BKZ1 582 aaKnown RBP22.79■■□□□ 1.24
TSPAN4-213ENST00000524895 MYO5BQ9ULV0 1848 aa22.78■■□□□ 1.24
TSPAN4-213ENST00000524895 UBR1Q8IWV7 1749 aa22.78■■□□□ 1.24
TSPAN4-213ENST00000524895 CEP170BQ9Y4F5 1589 aaPredicted RBP22.77■■□□□ 1.24
TSPAN4-213ENST00000524895 A2ML1A8K2U0 1454 aa22.77■■□□□ 1.24
TSPAN4-213ENST00000524895 ZNF142P52746 1687 aaPredicted RBP22.77■■□□□ 1.24
TSPAN4-213ENST00000524895 IFT172Q9UG01 1749 aa22.75■■□□□ 1.23
TSPAN4-213ENST00000524895 DCAF11Q8TEB1 546 aa22.75■■□□□ 1.23
TSPAN4-213ENST00000524895 UHRF1BP1Q6BDS2 1440 aa22.74■■□□□ 1.23
TSPAN4-213ENST00000524895 RPGRIP1LQ68CZ1 1315 aa22.73■■□□□ 1.23
TSPAN4-213ENST00000524895 PPLO60437 1756 aa22.73■■□□□ 1.23
TSPAN4-213ENST00000524895 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
TSPAN4-213ENST00000524895 KDM2AQ9Y2K7 1162 aa22.72■■□□□ 1.23
TSPAN4-213ENST00000524895 SETD1BQ9UPS6 1966 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms