RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 ROCK1Q13464 1354 aa15.43■□□□□ 0.06
TTC39A-213ENST00000524442 ZMYM3Q14202 1370 aa15.42■□□□□ 0.06
TTC39A-213ENST00000524442 MROH2AA6NES4 1674 aa15.41■□□□□ 0.06
TTC39A-213ENST00000524442 PTPRKQ15262 1439 aa15.41■□□□□ 0.06
TTC39A-213ENST00000524442 WASHC2CQ9Y4E1 1318 aa15.41■□□□□ 0.06
TTC39A-213ENST00000524442 RNF17Q9BXT8 1623 aaKnown RBP15.4■□□□□ 0.06
TTC39A-213ENST00000524442 CEBPAP49715 358 aaPredicted RBP15.4■□□□□ 0.06
TTC39A-213ENST00000524442 KDM5DQ9BY66 1539 aa15.39■□□□□ 0.05
TTC39A-213ENST00000524442 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
TTC39A-213ENST00000524442 NPATQ14207 1427 aa15.38■□□□□ 0.05
TTC39A-213ENST00000524442 ANKRD50Q9ULJ7 1429 aa15.37■□□□□ 0.05
TTC39A-213ENST00000524442 ITGAEP38570 1179 aa15.37■□□□□ 0.05
TTC39A-213ENST00000524442 C3P01024 1663 aa15.37■□□□□ 0.05
TTC39A-213ENST00000524442 CLTCQ00610 1675 aaKnown RBP15.37■□□□□ 0.05
TTC39A-213ENST00000524442 KANK1Q14678 1352 aa15.35■□□□□ 0.05
TTC39A-213ENST00000524442 PRDM15P57071 1507 aaPredicted RBP15.34■□□□□ 0.05
TTC39A-213ENST00000524442 MROH1Q8NDA8 1641 aa15.34■□□□□ 0.05
TTC39A-213ENST00000524442 SETD1BQ9UPS6 1966 aaKnown RBP15.34■□□□□ 0.05
TTC39A-213ENST00000524442 ZC3H13Q5T200 1668 aaKnown RBP15.34■□□□□ 0.05
TTC39A-213ENST00000524442 LMTK3Q96Q04 1460 aa15.33■□□□□ 0.05
TTC39A-213ENST00000524442 ABCC3O15438 1527 aa15.33■□□□□ 0.05
TTC39A-213ENST00000524442 DEPDC5O75140 1603 aa15.33■□□□□ 0.04
TTC39A-213ENST00000524442 UHRF1BP1Q6BDS2 1440 aa15.33■□□□□ 0.04
TTC39A-213ENST00000524442 PZPP20742 1482 aa15.33■□□□□ 0.04
TTC39A-213ENST00000524442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.04
TTC39A-213ENST00000524442 PREX1Q8TCU6 1659 aa15.31■□□□□ 0.04
TTC39A-213ENST00000524442 ARHGAP31Q2M1Z3 1444 aa15.29■□□□□ 0.04
TTC39A-213ENST00000524442 VWDEQ8N2E2 1590 aa15.28■□□□□ 0.04
TTC39A-213ENST00000524442 LMTK2Q8IWU2 1503 aa15.28■□□□□ 0.04
TTC39A-213ENST00000524442 TNRQ92752 1358 aa15.26■□□□□ 0.03
TTC39A-213ENST00000524442 FBXO31Q5XUX0 539 aaPredicted RBP15.26■□□□□ 0.03
TTC39A-213ENST00000524442 HFM1A2PYH4 1435 aa15.26■□□□□ 0.03
TTC39A-213ENST00000524442 NAIPQ13075 1403 aa15.26■□□□□ 0.03
TTC39A-213ENST00000524442 CAMSAP1Q5T5Y3 1602 aa15.25■□□□□ 0.03
TTC39A-213ENST00000524442 UNC13BO14795 1591 aa15.25■□□□□ 0.03
TTC39A-213ENST00000524442 CEP152O94986 1710 aa15.24■□□□□ 0.03
TTC39A-213ENST00000524442 HSPA2P54652 639 aa15.24■□□□□ 0.03
TTC39A-213ENST00000524442 SPATA31D1Q6ZQQ2 1576 aa15.24■□□□□ 0.03
TTC39A-213ENST00000524442 ERVK-7P63135 1459 aa15.23■□□□□ 0.03
TTC39A-213ENST00000524442 NLRP1Q9C000 1473 aa15.22■□□□□ 0.03
TTC39A-213ENST00000524442 NUP155O75694 1391 aa15.22■□□□□ 0.03
TTC39A-213ENST00000524442 MYO3AQ8NEV4 1616 aa15.21■□□□□ 0.03
TTC39A-213ENST00000524442 A2ML1A8K2U0 1454 aa15.21■□□□□ 0.03
TTC39A-213ENST00000524442 RPRD2Q5VT52 1461 aaKnown RBP15.21■□□□□ 0.03
TTC39A-213ENST00000524442 GCC2Q8IWJ2 1684 aa15.21■□□□□ 0.03
TTC39A-213ENST00000524442 EFCAB6Q5THR3 1501 aa15.21■□□□□ 0.03
TTC39A-213ENST00000524442 CEP170BQ9Y4F5 1589 aaPredicted RBP15.2■□□□□ 0.02
TTC39A-213ENST00000524442 ZNF142P52746 1687 aaPredicted RBP15.2■□□□□ 0.02
TTC39A-213ENST00000524442 ACIN1Q9UKV3 1341 aaKnown RBP15.19■□□□□ 0.02
TTC39A-213ENST00000524442 TET3O43151 1660 aa15.19■□□□□ 0.02
TTC39A-213ENST00000524442 IQGAP3Q86VI3 1631 aa15.18■□□□□ 0.02
TTC39A-213ENST00000524442 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
TTC39A-213ENST00000524442 THEMISQ8N1K5 641 aaPredicted RBP15.17■□□□□ 0.02
TTC39A-213ENST00000524442 NOS1P29475 1434 aa15.17■□□□□ 0.02
TTC39A-213ENST00000524442 PLA2R1Q13018 1463 aa15.16■□□□□ 0.02
TTC39A-213ENST00000524442 PKD2Q13563 968 aa15.15■□□□□ 0.02
TTC39A-213ENST00000524442 SLC52A1Q9NWF4 448 aa15.15■□□□□ 0.02
TTC39A-213ENST00000524442 UGGT1Q9NYU2 1555 aa15.15■□□□□ 0.02
TTC39A-213ENST00000524442 SETD5Q9C0A6 1442 aa15.12■□□□□ 0.01
TTC39A-213ENST00000524442 TRIM52Q96A61 297 aa15.12■□□□□ 0.01
TTC39A-213ENST00000524442 PTPRTO14522 1441 aa15.11■□□□□ 0.01
TTC39A-213ENST00000524442 IDI1Q13907 227 aa15.11■□□□□ 0.01
TTC39A-213ENST00000524442 ANKLE2Q86XL3 938 aa15.1■□□□□ 0.01
TTC39A-213ENST00000524442 STRCQ7RTU9 1775 aa15.1■□□□□ 0.01
TTC39A-213ENST00000524442 SYNMO15061 1565 aa15.1■□□□□ 0.01
TTC39A-213ENST00000524442 CFAP65Q6ZU64 1925 aaKnown RBP15.09■□□□□ 0.01
TTC39A-213ENST00000524442 E9PCH4 1651 aa15.09■□□□□ 0.01
TTC39A-213ENST00000524442 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
TTC39A-213ENST00000524442 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
TTC39A-213ENST00000524442 KDM5AP29375 1690 aaKnown RBP15.08■□□□□ 0
TTC39A-213ENST00000524442 HRCP23327 699 aa15.07■□□□□ 0
TTC39A-213ENST00000524442 NCKAP5LQ9HCH0 1330 aa15.07■□□□□ 0
TTC39A-213ENST00000524442 UBR1Q8IWV7 1749 aa15.06■□□□□ 0
TTC39A-213ENST00000524442 PIK3C2BO00750 1634 aa15.06■□□□□ 0
TTC39A-213ENST00000524442 RAB3GAP2Q9H2M9 1393 aa15.05■□□□□ -0
TTC39A-213ENST00000524442 SLIT1O75093 1534 aa15.05■□□□□ -0
TTC39A-213ENST00000524442 ADGRB3O60242 1522 aa15.04■□□□□ -0
TTC39A-213ENST00000524442 ARHGAP23Q9P227 1491 aa15.04■□□□□ -0
TTC39A-213ENST00000524442 TMEM2Q9UHN6 1383 aa15.04■□□□□ -0
TTC39A-213ENST00000524442 MED14O60244 1454 aa15.03■□□□□ -0
TTC39A-213ENST00000524442 MPHOSPH9Q99550 1183 aa15.03■□□□□ -0
TTC39A-213ENST00000524442 EID1Q9Y6B2 187 aa15.03■□□□□ -0
TTC39A-213ENST00000524442 HDGFP51858 240 aaKnown RBP15.02■□□□□ -0
TTC39A-213ENST00000524442 SCAF11Q99590 1463 aaKnown RBP15.01□□□□□ -0.01
TTC39A-213ENST00000524442 TXNDC2Q86VQ3 553 aa15.01□□□□□ -0.01
TTC39A-213ENST00000524442 TRPM2O94759 1503 aa15.01□□□□□ -0.01
TTC39A-213ENST00000524442 NPHP4O75161 1426 aaPredicted RBP15□□□□□ -0.01
TTC39A-213ENST00000524442 POLR1AO95602 1720 aaPredicted RBP15□□□□□ -0.01
TTC39A-213ENST00000524442 SPHKAPQ2M3C7 1700 aa15□□□□□ -0.01
TTC39A-213ENST00000524442 NEURL4Q96JN8 1562 aa15□□□□□ -0.01
TTC39A-213ENST00000524442 LTKP29376 864 aa14.99□□□□□ -0.01
TTC39A-213ENST00000524442 TMEM131LA2VDJ0 1609 aa14.99□□□□□ -0.01
TTC39A-213ENST00000524442 CHGAP10645 457 aaKnown RBP14.98□□□□□ -0.01
TTC39A-213ENST00000524442 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.97□□□□□ -0.01
TTC39A-213ENST00000524442 ZFYVE9O95405 1425 aa14.96□□□□□ -0.01
TTC39A-213ENST00000524442 RIMS2Q9UQ26 1411 aa14.95□□□□□ -0.02
TTC39A-213ENST00000524442 TRIM26Q12899 539 aaPredicted RBP14.95□□□□□ -0.02
TTC39A-213ENST00000524442 IQGAP1P46940 1657 aa14.94□□□□□ -0.02
TTC39A-213ENST00000524442 CCDC144AA2RUR9 1427 aa14.93□□□□□ -0.02
TTC39A-213ENST00000524442 CLTCL1P53675 1640 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms