RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 MROH1Q8NDA8 1641 aa28.18■■■□□ 2.1
LMO1-203ENST00000524379 KIF3BO15066 747 aa28.17■■■□□ 2.1
LMO1-203ENST00000524379 RNF17Q9BXT8 1623 aaKnown RBP28.17■■■□□ 2.1
LMO1-203ENST00000524379 MLECQ14165 292 aa28.14■■■□□ 2.1
LMO1-203ENST00000524379 DEPDC5O75140 1603 aa28.12■■■□□ 2.09
LMO1-203ENST00000524379 PLPPR3Q6T4P5 718 aa28.1■■■□□ 2.09
LMO1-203ENST00000524379 RIMS1Q86UR5 1692 aaKnown RBP28.09■■■□□ 2.09
LMO1-203ENST00000524379 GGT6Q6P531 493 aa28.08■■■□□ 2.09
LMO1-203ENST00000524379 PRDM15P57071 1507 aaPredicted RBP28.08■■■□□ 2.08
LMO1-203ENST00000524379 SETD5Q9C0A6 1442 aa28.07■■■□□ 2.08
LMO1-203ENST00000524379 UNC13BO14795 1591 aa28.07■■■□□ 2.08
LMO1-203ENST00000524379 VWDEQ8N2E2 1590 aa28.04■■■□□ 2.08
LMO1-203ENST00000524379 FER1L4A9Z1Z3 1794 aa28.01■■■□□ 2.08
LMO1-203ENST00000524379 RAB3GAP2Q9H2M9 1393 aa28.01■■■□□ 2.07
LMO1-203ENST00000524379 ABCC3O15438 1527 aa28.01■■■□□ 2.07
LMO1-203ENST00000524379 KDM5DQ9BY66 1539 aa28.01■■■□□ 2.07
LMO1-203ENST00000524379 LMTK3Q96Q04 1460 aa28.01■■■□□ 2.07
LMO1-203ENST00000524379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.99■■■□□ 2.07
LMO1-203ENST00000524379 CLTCQ00610 1675 aaKnown RBP27.98■■■□□ 2.07
LMO1-203ENST00000524379 CEP152O94986 1710 aa27.96■■■□□ 2.07
LMO1-203ENST00000524379 FAM135AQ9P2D6 1515 aa27.96■■■□□ 2.07
LMO1-203ENST00000524379 PPP6R1Q9UPN7 881 aa27.95■■■□□ 2.06
LMO1-203ENST00000524379 IQGAP3Q86VI3 1631 aa27.94■■■□□ 2.06
LMO1-203ENST00000524379 HSPA2P54652 639 aa27.94■■■□□ 2.06
LMO1-203ENST00000524379 LMTK2Q8IWU2 1503 aa27.93■■■□□ 2.06
LMO1-203ENST00000524379 ZC3H13Q5T200 1668 aaKnown RBP27.92■■■□□ 2.06
LMO1-203ENST00000524379 NUP155O75694 1391 aa27.92■■■□□ 2.06
LMO1-203ENST00000524379 PCGF6Q9BYE7 350 aa27.92■■■□□ 2.06
LMO1-203ENST00000524379 WASHC2CQ9Y4E1 1318 aa27.92■■■□□ 2.06
LMO1-203ENST00000524379 CNTLNQ9NXG0 1405 aa27.91■■■□□ 2.06
LMO1-203ENST00000524379 PZPP20742 1482 aa27.9■■■□□ 2.06
LMO1-203ENST00000524379 MROH2AA6NES4 1674 aa27.9■■■□□ 2.06
LMO1-203ENST00000524379 CAMSAP1Q5T5Y3 1602 aa27.89■■■□□ 2.05
LMO1-203ENST00000524379 KANK1Q14678 1352 aa27.88■■■□□ 2.05
LMO1-203ENST00000524379 CEBPAP49715 358 aaPredicted RBP27.88■■■□□ 2.05
LMO1-203ENST00000524379 C3P01024 1663 aa27.87■■■□□ 2.05
LMO1-203ENST00000524379 ZMYM3Q14202 1370 aa27.86■■■□□ 2.05
LMO1-203ENST00000524379 FBXO41Q8TF61 875 aa27.86■■■□□ 2.05
LMO1-203ENST00000524379 TET3O43151 1660 aa27.85■■■□□ 2.05
LMO1-203ENST00000524379 HRCP23327 699 aa27.85■■■□□ 2.05
LMO1-203ENST00000524379 EFCAB6Q5THR3 1501 aa27.85■■■□□ 2.05
LMO1-203ENST00000524379 TRIM52Q96A61 297 aa27.84■■■□□ 2.05
LMO1-203ENST00000524379 ESF1Q9H501 851 aaKnown RBP27.83■■■□□ 2.05
LMO1-203ENST00000524379 NPATQ14207 1427 aa27.83■■■□□ 2.05
LMO1-203ENST00000524379 ARHGAP31Q2M1Z3 1444 aa27.81■■■□□ 2.04
LMO1-203ENST00000524379 E9PCH4 1651 aa27.79■■■□□ 2.04
LMO1-203ENST00000524379 FBXO31Q5XUX0 539 aaPredicted RBP27.76■■■□□ 2.03
LMO1-203ENST00000524379 MPHOSPH9Q99550 1183 aa27.74■■■□□ 2.03
LMO1-203ENST00000524379 ERVK-7P63135 1459 aa27.73■■■□□ 2.03
LMO1-203ENST00000524379 SLC4A1APQ9BWU0 796 aaKnown RBP27.73■■■□□ 2.03
LMO1-203ENST00000524379 SETD1BQ9UPS6 1966 aaKnown RBP27.73■■■□□ 2.03
LMO1-203ENST00000524379 SPATA31D1Q6ZQQ2 1576 aa27.72■■■□□ 2.03
LMO1-203ENST00000524379 PREX1Q8TCU6 1659 aa27.72■■■□□ 2.03
LMO1-203ENST00000524379 RPRD2Q5VT52 1461 aaKnown RBP27.71■■■□□ 2.03
LMO1-203ENST00000524379 NOS1P29475 1434 aa27.7■■■□□ 2.03
LMO1-203ENST00000524379 PKD2Q13563 968 aa27.7■■■□□ 2.02
LMO1-203ENST00000524379 ACIN1Q9UKV3 1341 aaKnown RBP27.69■■■□□ 2.02
LMO1-203ENST00000524379 UHRF1BP1Q6BDS2 1440 aa27.68■■■□□ 2.02
LMO1-203ENST00000524379 FOXD1Q16676 465 aa27.68■■■□□ 2.02
LMO1-203ENST00000524379 SYNMO15061 1565 aa27.68■■■□□ 2.02
LMO1-203ENST00000524379 PLA2R1Q13018 1463 aa27.67■■■□□ 2.02
LMO1-203ENST00000524379 CFAP65Q6ZU64 1925 aaKnown RBP27.67■■■□□ 2.02
LMO1-203ENST00000524379 DMRT2Q9Y5R5 561 aa27.65■■■□□ 2.02
LMO1-203ENST00000524379 PTPRTO14522 1441 aa27.64■■■□□ 2.02
LMO1-203ENST00000524379 TNRQ92752 1358 aa27.63■■■□□ 2.01
LMO1-203ENST00000524379 CERKQ8TCT0 537 aa27.62■■■□□ 2.01
LMO1-203ENST00000524379 DHX57Q6P158 1386 aaKnown RBP27.6■■■□□ 2.01
LMO1-203ENST00000524379 UGGT1Q9NYU2 1555 aa27.6■■■□□ 2.01
LMO1-203ENST00000524379 SPHKAPQ2M3C7 1700 aa27.6■■■□□ 2.01
LMO1-203ENST00000524379 MYO3AQ8NEV4 1616 aa27.59■■■□□ 2.01
LMO1-203ENST00000524379 TRPM2O94759 1503 aa27.57■■■□□ 2
LMO1-203ENST00000524379 PIK3C2BO00750 1634 aa27.56■■■□□ 2
LMO1-203ENST00000524379 STRCQ7RTU9 1775 aa27.53■■■□□ 2
LMO1-203ENST00000524379 CLTCL1P53675 1640 aa27.52■■■□□ 2
LMO1-203ENST00000524379 ANKRD30BQ9BXX2 1392 aa27.52■■■□□ 2
LMO1-203ENST00000524379 NLRP1Q9C000 1473 aa27.51■■■□□ 2
LMO1-203ENST00000524379 IDI1Q13907 227 aa27.51■■□□□ 1.99
LMO1-203ENST00000524379 ZNF142P52746 1687 aaPredicted RBP27.5■■□□□ 1.99
LMO1-203ENST00000524379 CEP170BQ9Y4F5 1589 aaPredicted RBP27.5■■□□□ 1.99
LMO1-203ENST00000524379 A2ML1A8K2U0 1454 aa27.49■■□□□ 1.99
LMO1-203ENST00000524379 SLC52A1Q9NWF4 448 aa27.46■■□□□ 1.99
LMO1-203ENST00000524379 UBR1Q8IWV7 1749 aa27.44■■□□□ 1.98
LMO1-203ENST00000524379 ADGRB3O60242 1522 aa27.43■■□□□ 1.98
LMO1-203ENST00000524379 TMEM131LA2VDJ0 1609 aa27.42■■□□□ 1.98
LMO1-203ENST00000524379 CCDC144AA2RUR9 1427 aa27.4■■□□□ 1.98
LMO1-203ENST00000524379 KDM5AP29375 1690 aaKnown RBP27.38■■□□□ 1.97
LMO1-203ENST00000524379 MYO5BQ9ULV0 1848 aa27.38■■□□□ 1.97
LMO1-203ENST00000524379 SPATA31E1Q6ZUB1 1445 aa27.35■■□□□ 1.97
LMO1-203ENST00000524379 NCKAP5LQ9HCH0 1330 aa27.34■■□□□ 1.97
LMO1-203ENST00000524379 SIN3AQ96ST3 1273 aa27.32■■□□□ 1.96
LMO1-203ENST00000524379 KIF1BO60333 1816 aa27.32■■□□□ 1.96
LMO1-203ENST00000524379 ARHGAP23Q9P227 1491 aa27.32■■□□□ 1.96
LMO1-203ENST00000524379 CHGAP10645 457 aaKnown RBP27.31■■□□□ 1.96
LMO1-203ENST00000524379 SLIT1O75093 1534 aa27.3■■□□□ 1.96
LMO1-203ENST00000524379 NEURL4Q96JN8 1562 aa27.28■■□□□ 1.96
LMO1-203ENST00000524379 TMEM2Q9UHN6 1383 aa27.28■■□□□ 1.96
LMO1-203ENST00000524379 ZFYVE9O95405 1425 aa27.27■■□□□ 1.96
LMO1-203ENST00000524379 THEMISQ8N1K5 641 aaPredicted RBP27.27■■□□□ 1.96
LMO1-203ENST00000524379 STAG3Q9UJ98 1225 aa27.27■■□□□ 1.96
LMO1-203ENST00000524379 NEXMIFQ5QGS0 1516 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms