RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 SPDYE6P0CI01 402 aa13.49□□□□□ -0.25
CTNNA1-242ENST00000524292 SPDYE2Q495Y8 402 aa13.49□□□□□ -0.25
CTNNA1-242ENST00000524292 UHRF1BP1Q6BDS2 1440 aa13.48□□□□□ -0.25
CTNNA1-242ENST00000524292 VPS8Q8N3P4 1428 aa13.48□□□□□ -0.25
CTNNA1-242ENST00000524292 SUPT6HQ7KZ85 1726 aaKnown RBP13.48□□□□□ -0.25
CTNNA1-242ENST00000524292 LOC105371045A0A1W2PR82 267 aa13.47□□□□□ -0.25
CTNNA1-242ENST00000524292 A2MP01023 1474 aa13.47□□□□□ -0.25
CTNNA1-242ENST00000524292 NCOA2Q15596 1464 aa13.47□□□□□ -0.25
CTNNA1-242ENST00000524292 ZNF644Q9H582 1327 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-242ENST00000524292 C3P01024 1663 aa13.46□□□□□ -0.26
CTNNA1-242ENST00000524292 PLXNC1O60486 1568 aa13.45□□□□□ -0.26
CTNNA1-242ENST00000524292 SETD1BQ9UPS6 1966 aaKnown RBP13.45□□□□□ -0.26
CTNNA1-242ENST00000524292 MBD5Q9P267 1494 aa13.44□□□□□ -0.26
CTNNA1-242ENST00000524292 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
CTNNA1-242ENST00000524292 ADGBQ8N7X0 1667 aa13.44□□□□□ -0.26
CTNNA1-242ENST00000524292 CAMSAP2Q08AD1 1489 aa13.43□□□□□ -0.26
CTNNA1-242ENST00000524292 RTEL1-TNFRSF6BF6WH68 1400 aa13.43□□□□□ -0.26
CTNNA1-242ENST00000524292 FBXO41Q8TF61 875 aa13.43□□□□□ -0.26
CTNNA1-242ENST00000524292 MROH2AA6NES4 1674 aa13.43□□□□□ -0.26
CTNNA1-242ENST00000524292 CCDC141Q6ZP82 1450 aa13.42□□□□□ -0.26
CTNNA1-242ENST00000524292 LRRC9Q6ZRR7 1453 aa13.42□□□□□ -0.26
CTNNA1-242ENST00000524292 RSPH4AQ5TD94 716 aa13.42□□□□□ -0.26
CTNNA1-242ENST00000524292 NPATQ14207 1427 aa13.41□□□□□ -0.26
CTNNA1-242ENST00000524292 MAP3K1Q13233 1512 aa13.4□□□□□ -0.26
CTNNA1-242ENST00000524292 GGT6Q6P531 493 aa13.4□□□□□ -0.26
CTNNA1-242ENST00000524292 ZMYM3Q14202 1370 aa13.4□□□□□ -0.26
CTNNA1-242ENST00000524292 CLTCQ00610 1675 aaKnown RBP13.38□□□□□ -0.27
CTNNA1-242ENST00000524292 DHX29Q7Z478 1369 aaKnown RBP13.38□□□□□ -0.27
CTNNA1-242ENST00000524292 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
CTNNA1-242ENST00000524292 ARHGEF5Q12774 1597 aa13.37□□□□□ -0.27
CTNNA1-242ENST00000524292 TSPY4P0CV99 314 aa13.37□□□□□ -0.27
CTNNA1-242ENST00000524292 TSPY10P0CW01 314 aa13.37□□□□□ -0.27
CTNNA1-242ENST00000524292 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
CTNNA1-242ENST00000524292 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
CTNNA1-242ENST00000524292 MYOM3Q5VTT5 1437 aa13.34□□□□□ -0.27
CTNNA1-242ENST00000524292 MIA2Q96PC5 1412 aa13.34□□□□□ -0.27
CTNNA1-242ENST00000524292 KIF3BO15066 747 aa13.34□□□□□ -0.27
CTNNA1-242ENST00000524292 KANK4Q5T7N3 995 aaPredicted RBP13.34□□□□□ -0.27
CTNNA1-242ENST00000524292 CERKQ8TCT0 537 aa13.34□□□□□ -0.27
CTNNA1-242ENST00000524292 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
CTNNA1-242ENST00000524292 PTPRTO14522 1441 aa13.33□□□□□ -0.28
CTNNA1-242ENST00000524292 PTPRKQ15262 1439 aa13.33□□□□□ -0.28
CTNNA1-242ENST00000524292 NCOA1Q15788 1441 aa13.33□□□□□ -0.28
CTNNA1-242ENST00000524292 KDM5DQ9BY66 1539 aa13.32□□□□□ -0.28
CTNNA1-242ENST00000524292 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
CTNNA1-242ENST00000524292 CAMSAP1Q5T5Y3 1602 aa13.31□□□□□ -0.28
CTNNA1-242ENST00000524292 ZNF142P52746 1687 aaPredicted RBP13.31□□□□□ -0.28
CTNNA1-242ENST00000524292 MAST1Q9Y2H9 1570 aa13.3□□□□□ -0.28
CTNNA1-242ENST00000524292 CEP170BQ9Y4F5 1589 aaPredicted RBP13.3□□□□□ -0.28
CTNNA1-242ENST00000524292 WASHC2CQ9Y4E1 1318 aa13.3□□□□□ -0.28
CTNNA1-242ENST00000524292 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
CTNNA1-242ENST00000524292 SPDYE4A6NLX3 237 aa13.28□□□□□ -0.28
CTNNA1-242ENST00000524292 PZPP20742 1482 aa13.28□□□□□ -0.28
CTNNA1-242ENST00000524292 PLA2R1Q13018 1463 aa13.28□□□□□ -0.28
CTNNA1-242ENST00000524292 TNRQ92752 1358 aa13.27□□□□□ -0.29
CTNNA1-242ENST00000524292 A2ML1A8K2U0 1454 aa13.26□□□□□ -0.29
CTNNA1-242ENST00000524292 PKD2Q13563 968 aa13.26□□□□□ -0.29
CTNNA1-242ENST00000524292 RNF17Q9BXT8 1623 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-242ENST00000524292 EIF2AK4Q9P2K8 1649 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-242ENST00000524292 PTPN23Q9H3S7 1636 aa13.24□□□□□ -0.29
CTNNA1-242ENST00000524292 SHANK2Q9UPX8 1470 aa13.24□□□□□ -0.29
CTNNA1-242ENST00000524292 NCKAP5LQ9HCH0 1330 aa13.24□□□□□ -0.29
CTNNA1-242ENST00000524292 DUOX2Q9NRD8 1548 aa13.23□□□□□ -0.29
CTNNA1-242ENST00000524292 TCOF1Q13428 1488 aaKnown RBP13.23□□□□□ -0.29
CTNNA1-242ENST00000524292 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
CTNNA1-242ENST00000524292 FBXO31Q5XUX0 539 aaPredicted RBP13.23□□□□□ -0.29
CTNNA1-242ENST00000524292 ZC3H13Q5T200 1668 aaKnown RBP13.23□□□□□ -0.29
CTNNA1-242ENST00000524292 KIF15Q9NS87 1388 aa13.22□□□□□ -0.29
CTNNA1-242ENST00000524292 CROCC2H7BZ55 1655 aa13.22□□□□□ -0.29
CTNNA1-242ENST00000524292 DNMT1P26358 1616 aaKnown RBP13.22□□□□□ -0.29
CTNNA1-242ENST00000524292 ABCC3O15438 1527 aa13.22□□□□□ -0.29
CTNNA1-242ENST00000524292 NLRP1Q9C000 1473 aa13.22□□□□□ -0.29
CTNNA1-242ENST00000524292 ABCC5O15440 1437 aa13.21□□□□□ -0.3
CTNNA1-242ENST00000524292 DAPK1P53355 1430 aa13.21□□□□□ -0.3
CTNNA1-242ENST00000524292 ERBINQ96RT1 1412 aa13.21□□□□□ -0.3
CTNNA1-242ENST00000524292 LTBP4Q8N2S1 1624 aa13.21□□□□□ -0.3
CTNNA1-242ENST00000524292 IQSEC2Q5JU85 1478 aa13.2□□□□□ -0.3
CTNNA1-242ENST00000524292 RRP7BPQ9NSQ0 103 aa13.19□□□□□ -0.3
CTNNA1-242ENST00000524292 MROH1Q8NDA8 1641 aa13.18□□□□□ -0.3
CTNNA1-242ENST00000524292 THEMISQ8N1K5 641 aaPredicted RBP13.18□□□□□ -0.3
CTNNA1-242ENST00000524292 UGGT1Q9NYU2 1555 aa13.18□□□□□ -0.3
CTNNA1-242ENST00000524292 ANKRD30AQ9BXX3 1397 aa13.18□□□□□ -0.3
CTNNA1-242ENST00000524292 ZNF335Q9H4Z2 1342 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-242ENST00000524292 PRDM15P57071 1507 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-242ENST00000524292 ERVK-7P63135 1459 aa13.16□□□□□ -0.3
CTNNA1-242ENST00000524292 POLR1AO95602 1720 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-242ENST00000524292 SPATA31D1Q6ZQQ2 1576 aa13.16□□□□□ -0.3
CTNNA1-242ENST00000524292 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
CTNNA1-242ENST00000524292 KANK1Q14678 1352 aa13.16□□□□□ -0.3
CTNNA1-242ENST00000524292 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
CTNNA1-242ENST00000524292 PITPNM1O00562 1244 aa13.15□□□□□ -0.3
CTNNA1-242ENST00000524292 CHRDL2Q6WN34 429 aa13.15□□□□□ -0.3
CTNNA1-242ENST00000524292 CEP152O94986 1710 aa13.15□□□□□ -0.3
CTNNA1-242ENST00000524292 FAM50AQ14320 339 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-242ENST00000524292 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-242ENST00000524292 CHIC2Q9UKJ5 165 aa13.14□□□□□ -0.31
CTNNA1-242ENST00000524292 NEURL4Q96JN8 1562 aa13.13□□□□□ -0.31
CTNNA1-242ENST00000524292 ARHGAP31Q2M1Z3 1444 aa13.13□□□□□ -0.31
CTNNA1-242ENST00000524292 DEPDC5O75140 1603 aa13.12□□□□□ -0.31
CTNNA1-242ENST00000524292 NPHP4O75161 1426 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 612.9 ms