RNA–Protein interactions for RNA: ENST00000523962.5

NECAB1-206, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 3

Gene NECAB1, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-206ENST00000523962 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
NECAB1-206ENST00000523962 KIAA1107Q9UPP5 1409 aa15.81■□□□□ 0.12
NECAB1-206ENST00000523962 SYCP2Q9BX26 1530 aa15.8■□□□□ 0.12
NECAB1-206ENST00000523962 A2MP01023 1474 aa15.8■□□□□ 0.12
NECAB1-206ENST00000523962 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
NECAB1-206ENST00000523962 PTPRKQ15262 1439 aa15.79■□□□□ 0.12
NECAB1-206ENST00000523962 CDC42BPAQ5VT25 1732 aa15.79■□□□□ 0.12
NECAB1-206ENST00000523962 PLEKHH2Q8IVE3 1493 aa15.78■□□□□ 0.12
NECAB1-206ENST00000523962 ATP7AQ04656 1500 aa15.77■□□□□ 0.11
NECAB1-206ENST00000523962 PLA2R1Q13018 1463 aa15.77■□□□□ 0.11
NECAB1-206ENST00000523962 MROH2AA6NES4 1674 aa15.76■□□□□ 0.11
NECAB1-206ENST00000523962 MTUS2Q5JR59 1369 aa15.76■□□□□ 0.11
NECAB1-206ENST00000523962 ZNF644Q9H582 1327 aaPredicted RBP15.76■□□□□ 0.11
NECAB1-206ENST00000523962 SUPT6HQ7KZ85 1726 aaKnown RBP15.76■□□□□ 0.11
NECAB1-206ENST00000523962 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
NECAB1-206ENST00000523962 TCOF1Q13428 1488 aaKnown RBP15.74■□□□□ 0.11
NECAB1-206ENST00000523962 CLTCQ00610 1675 aaKnown RBP15.73■□□□□ 0.11
NECAB1-206ENST00000523962 KIF3BO15066 747 aa15.72■□□□□ 0.11
NECAB1-206ENST00000523962 TOM1O60784 492 aa15.72■□□□□ 0.11
NECAB1-206ENST00000523962 PIP4K2BP78356 416 aa15.72■□□□□ 0.11
NECAB1-206ENST00000523962 FBXO31Q5XUX0 539 aaPredicted RBP15.72■□□□□ 0.11
NECAB1-206ENST00000523962 DHX29Q7Z478 1369 aaKnown RBP15.72■□□□□ 0.11
NECAB1-206ENST00000523962 CEP170BQ9Y4F5 1589 aaPredicted RBP15.71■□□□□ 0.11
NECAB1-206ENST00000523962 MYCNP04198 464 aaPredicted RBP15.71■□□□□ 0.11
NECAB1-206ENST00000523962 PLXNC1O60486 1568 aa15.7■□□□□ 0.1
NECAB1-206ENST00000523962 HSPA1LP34931 641 aa15.7■□□□□ 0.1
NECAB1-206ENST00000523962 A2ML1A8K2U0 1454 aa15.7■□□□□ 0.1
NECAB1-206ENST00000523962 ANKLE2Q86XL3 938 aa15.69■□□□□ 0.1
NECAB1-206ENST00000523962 INO80Q9ULG1 1556 aaPredicted RBP15.69■□□□□ 0.1
NECAB1-206ENST00000523962 RTEL1-TNFRSF6BF6WH68 1400 aa15.68■□□□□ 0.1
NECAB1-206ENST00000523962 MYO3AQ8NEV4 1616 aa15.68■□□□□ 0.1
NECAB1-206ENST00000523962 TNRQ92752 1358 aa15.68■□□□□ 0.1
NECAB1-206ENST00000523962 THEMISQ8N1K5 641 aaPredicted RBP15.68■□□□□ 0.1
NECAB1-206ENST00000523962 WASHC2CQ9Y4E1 1318 aa15.68■□□□□ 0.1
NECAB1-206ENST00000523962 MBD5Q9P267 1494 aa15.67■□□□□ 0.1
NECAB1-206ENST00000523962 RSPH4AQ5TD94 716 aa15.66■□□□□ 0.1
NECAB1-206ENST00000523962 ZNF142P52746 1687 aaPredicted RBP15.66■□□□□ 0.1
NECAB1-206ENST00000523962 DNMT1P26358 1616 aaKnown RBP15.64■□□□□ 0.09
NECAB1-206ENST00000523962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.63■□□□□ 0.09
NECAB1-206ENST00000523962 SHANK2Q9UPX8 1470 aa15.63■□□□□ 0.09
NECAB1-206ENST00000523962 TSPY4P0CV99 314 aa15.62■□□□□ 0.09
NECAB1-206ENST00000523962 TSPY10P0CW01 314 aa15.62■□□□□ 0.09
NECAB1-206ENST00000523962 ADGBQ8N7X0 1667 aa15.62■□□□□ 0.09
NECAB1-206ENST00000523962 CEP162Q5TB80 1403 aa15.61■□□□□ 0.09
NECAB1-206ENST00000523962 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
NECAB1-206ENST00000523962 CPS1P31327 1500 aa15.61■□□□□ 0.09
NECAB1-206ENST00000523962 PZPP20742 1482 aa15.6■□□□□ 0.09
NECAB1-206ENST00000523962 TIAM1Q13009 1591 aa15.6■□□□□ 0.09
NECAB1-206ENST00000523962 POLA2Q14181 598 aa15.58■□□□□ 0.08
NECAB1-206ENST00000523962 CCDC141Q6ZP82 1450 aa15.58■□□□□ 0.08
NECAB1-206ENST00000523962 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.08
NECAB1-206ENST00000523962 NPHP4O75161 1426 aaPredicted RBP15.57■□□□□ 0.08
NECAB1-206ENST00000523962 NLRP1Q9C000 1473 aa15.56■□□□□ 0.08
NECAB1-206ENST00000523962 KDM5DQ9BY66 1539 aa15.56■□□□□ 0.08
NECAB1-206ENST00000523962 FAM135AQ9P2D6 1515 aa15.56■□□□□ 0.08
NECAB1-206ENST00000523962 NEURL4Q96JN8 1562 aa15.55■□□□□ 0.08
NECAB1-206ENST00000523962 UGGT1Q9NYU2 1555 aa15.54■□□□□ 0.08
NECAB1-206ENST00000523962 MED1Q15648 1581 aaPredicted RBP15.53■□□□□ 0.08
NECAB1-206ENST00000523962 MED14O60244 1454 aa15.53■□□□□ 0.08
NECAB1-206ENST00000523962 CAMSAP2Q08AD1 1489 aa15.53■□□□□ 0.08
NECAB1-206ENST00000523962 NCOA2Q15596 1464 aa15.53■□□□□ 0.08
NECAB1-206ENST00000523962 VWDEQ8N2E2 1590 aa15.51■□□□□ 0.07
NECAB1-206ENST00000523962 POLR1AO95602 1720 aaPredicted RBP15.5■□□□□ 0.07
NECAB1-206ENST00000523962 CHRDL2Q6WN34 429 aa15.48■□□□□ 0.07
NECAB1-206ENST00000523962 TXNDC2Q86VQ3 553 aa15.47■□□□□ 0.07
NECAB1-206ENST00000523962 LRRC7Q96NW7 1537 aa15.47■□□□□ 0.07
NECAB1-206ENST00000523962 DEPDC5O75140 1603 aa15.46■□□□□ 0.07
NECAB1-206ENST00000523962 ARHGEF5Q12774 1597 aa15.45■□□□□ 0.06
NECAB1-206ENST00000523962 LTKP29376 864 aa15.45■□□□□ 0.06
NECAB1-206ENST00000523962 ALKQ9UM73 1620 aa15.44■□□□□ 0.06
NECAB1-206ENST00000523962 EID1Q9Y6B2 187 aa15.44■□□□□ 0.06
NECAB1-206ENST00000523962 ABCC3O15438 1527 aa15.43■□□□□ 0.06
NECAB1-206ENST00000523962 ERVK-7P63135 1459 aa15.43■□□□□ 0.06
NECAB1-206ENST00000523962 IQGAP1P46940 1657 aa15.42■□□□□ 0.06
NECAB1-206ENST00000523962 KANK4Q5T7N3 995 aaPredicted RBP15.41■□□□□ 0.06
NECAB1-206ENST00000523962 STAG3Q9UJ98 1225 aa15.41■□□□□ 0.06
NECAB1-206ENST00000523962 SCAF11Q99590 1463 aaKnown RBP15.4■□□□□ 0.06
NECAB1-206ENST00000523962 RGS17Q9UGC6 210 aaPredicted RBP15.4■□□□□ 0.06
NECAB1-206ENST00000523962 LRRC9Q6ZRR7 1453 aa15.4■□□□□ 0.06
NECAB1-206ENST00000523962 RRP7BPQ9NSQ0 103 aa15.39■□□□□ 0.05
NECAB1-206ENST00000523962 RNF17Q9BXT8 1623 aaKnown RBP15.38■□□□□ 0.05
NECAB1-206ENST00000523962 MYOM3Q5VTT5 1437 aa15.37■□□□□ 0.05
NECAB1-206ENST00000523962 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
NECAB1-206ENST00000523962 MAST1Q9Y2H9 1570 aa15.36■□□□□ 0.05
NECAB1-206ENST00000523962 STRCP1A6NGW2 1772 aa15.36■□□□□ 0.05
NECAB1-206ENST00000523962 ARHGAP23Q9P227 1491 aa15.35■□□□□ 0.05
NECAB1-206ENST00000523962 LOC105371045A0A1W2PR82 267 aa15.35■□□□□ 0.05
NECAB1-206ENST00000523962 SLC4A1APQ9BWU0 796 aaKnown RBP15.35■□□□□ 0.05
NECAB1-206ENST00000523962 ZC3H13Q5T200 1668 aaKnown RBP15.35■□□□□ 0.05
NECAB1-206ENST00000523962 ARHGAP31Q2M1Z3 1444 aa15.34■□□□□ 0.05
NECAB1-206ENST00000523962 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
NECAB1-206ENST00000523962 DUOX2Q9NRD8 1548 aa15.34■□□□□ 0.05
NECAB1-206ENST00000523962 SYNMO15061 1565 aa15.34■□□□□ 0.05
NECAB1-206ENST00000523962 KCNA6P17658 529 aa15.34■□□□□ 0.05
NECAB1-206ENST00000523962 IDI1Q13907 227 aa15.34■□□□□ 0.05
NECAB1-206ENST00000523962 PROSER2Q86WR7 435 aaPredicted RBP15.34■□□□□ 0.05
NECAB1-206ENST00000523962 ZBTB12Q9Y330 459 aaPredicted RBP15.34■□□□□ 0.05
NECAB1-206ENST00000523962 KIF15Q9NS87 1388 aa15.34■□□□□ 0.05
NECAB1-206ENST00000523962 TMEM2Q9UHN6 1383 aa15.34■□□□□ 0.05
NECAB1-206ENST00000523962 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms