RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 CLTCQ00610 1675 aaKnown RBP19.2■□□□□ 0.66
VEGFA-225ENST00000523950 GGT6Q6P531 493 aa19.19■□□□□ 0.66
VEGFA-225ENST00000523950 KDM5DQ9BY66 1539 aa19.18■□□□□ 0.66
VEGFA-225ENST00000523950 ROCK1Q13464 1354 aa19.18■□□□□ 0.66
VEGFA-225ENST00000523950 ZC3H13Q5T200 1668 aaKnown RBP19.17■□□□□ 0.66
VEGFA-225ENST00000523950 RRP7BPQ9NSQ0 103 aa19.17■□□□□ 0.66
VEGFA-225ENST00000523950 CHIC2Q9UKJ5 165 aa19.16■□□□□ 0.66
VEGFA-225ENST00000523950 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
VEGFA-225ENST00000523950 DEPDC5O75140 1603 aa19.14■□□□□ 0.66
VEGFA-225ENST00000523950 PRDM15P57071 1507 aaPredicted RBP19.14■□□□□ 0.65
VEGFA-225ENST00000523950 MROH1Q8NDA8 1641 aa19.14■□□□□ 0.65
VEGFA-225ENST00000523950 SETD1BQ9UPS6 1966 aaKnown RBP19.13■□□□□ 0.65
VEGFA-225ENST00000523950 ZMYM3Q14202 1370 aa19.13■□□□□ 0.65
VEGFA-225ENST00000523950 PREX1Q8TCU6 1659 aa19.12■□□□□ 0.65
VEGFA-225ENST00000523950 NPATQ14207 1427 aa19.12■□□□□ 0.65
VEGFA-225ENST00000523950 ANKRD50Q9ULJ7 1429 aa19.1■□□□□ 0.65
VEGFA-225ENST00000523950 ABCC3O15438 1527 aa19.1■□□□□ 0.65
VEGFA-225ENST00000523950 WASHC2CQ9Y4E1 1318 aa19.09■□□□□ 0.65
VEGFA-225ENST00000523950 CEBPAP49715 358 aaPredicted RBP19.09■□□□□ 0.65
VEGFA-225ENST00000523950 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
VEGFA-225ENST00000523950 CEP152O94986 1710 aa19.07■□□□□ 0.64
VEGFA-225ENST00000523950 PZPP20742 1482 aa19.07■□□□□ 0.64
VEGFA-225ENST00000523950 LMTK3Q96Q04 1460 aa19.07■□□□□ 0.64
VEGFA-225ENST00000523950 KANK1Q14678 1352 aa19.06■□□□□ 0.64
VEGFA-225ENST00000523950 ITGAEP38570 1179 aa19.06■□□□□ 0.64
VEGFA-225ENST00000523950 CAMSAP1Q5T5Y3 1602 aa19.05■□□□□ 0.64
VEGFA-225ENST00000523950 UHRF1BP1Q6BDS2 1440 aa19.05■□□□□ 0.64
VEGFA-225ENST00000523950 VWDEQ8N2E2 1590 aa19.05■□□□□ 0.64
VEGFA-225ENST00000523950 LMTK2Q8IWU2 1503 aa19.05■□□□□ 0.64
VEGFA-225ENST00000523950 UNC13BO14795 1591 aa19.04■□□□□ 0.64
VEGFA-225ENST00000523950 GCC2Q8IWJ2 1684 aa19.03■□□□□ 0.64
VEGFA-225ENST00000523950 ARHGAP31Q2M1Z3 1444 aa19.01■□□□□ 0.63
VEGFA-225ENST00000523950 MYO3AQ8NEV4 1616 aa19■□□□□ 0.63
VEGFA-225ENST00000523950 ZNF142P52746 1687 aaPredicted RBP19■□□□□ 0.63
VEGFA-225ENST00000523950 SPATA31D1Q6ZQQ2 1576 aa18.98■□□□□ 0.63
VEGFA-225ENST00000523950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.98■□□□□ 0.631e-14■■■□□ 16.5
VEGFA-225ENST00000523950 HFM1A2PYH4 1435 aa18.98■□□□□ 0.63
VEGFA-225ENST00000523950 NAIPQ13075 1403 aa18.97■□□□□ 0.63
VEGFA-225ENST00000523950 EFCAB6Q5THR3 1501 aa18.96■□□□□ 0.63
VEGFA-225ENST00000523950 IQGAP3Q86VI3 1631 aa18.96■□□□□ 0.63
VEGFA-225ENST00000523950 TET3O43151 1660 aa18.95■□□□□ 0.62
VEGFA-225ENST00000523950 TNRQ92752 1358 aa18.95■□□□□ 0.62
VEGFA-225ENST00000523950 CEP170BQ9Y4F5 1589 aaPredicted RBP18.95■□□□□ 0.62
VEGFA-225ENST00000523950 ERVK-7P63135 1459 aa18.95■□□□□ 0.62
VEGFA-225ENST00000523950 NLRP1Q9C000 1473 aa18.94■□□□□ 0.62
VEGFA-225ENST00000523950 RPRD2Q5VT52 1461 aaKnown RBP18.93■□□□□ 0.62
VEGFA-225ENST00000523950 A2ML1A8K2U0 1454 aa18.92■□□□□ 0.62
VEGFA-225ENST00000523950 FBXO31Q5XUX0 539 aaPredicted RBP18.92■□□□□ 0.62
VEGFA-225ENST00000523950 CFAP65Q6ZU64 1925 aaKnown RBP18.9■□□□□ 0.62
VEGFA-225ENST00000523950 NUP155O75694 1391 aa18.89■□□□□ 0.61
VEGFA-225ENST00000523950 HSPA2P54652 639 aa18.88■□□□□ 0.61
VEGFA-225ENST00000523950 PLA2R1Q13018 1463 aa18.87■□□□□ 0.61
VEGFA-225ENST00000523950 ACIN1Q9UKV3 1341 aaKnown RBP18.87■□□□□ 0.61
VEGFA-225ENST00000523950 E9PCH4 1651 aa18.85■□□□□ 0.61
VEGFA-225ENST00000523950 NOS1P29475 1434 aa18.85■□□□□ 0.61
VEGFA-225ENST00000523950 STRCQ7RTU9 1775 aa18.84■□□□□ 0.61
VEGFA-225ENST00000523950 UGGT1Q9NYU2 1555 aa18.84■□□□□ 0.61
VEGFA-225ENST00000523950 KDM5AP29375 1690 aaKnown RBP18.83■□□□□ 0.61
VEGFA-225ENST00000523950 SYNMO15061 1565 aa18.82■□□□□ 0.6
VEGFA-225ENST00000523950 UBR1Q8IWV7 1749 aa18.81■□□□□ 0.6
VEGFA-225ENST00000523950 THEMISQ8N1K5 641 aaPredicted RBP18.8■□□□□ 0.6
VEGFA-225ENST00000523950 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
VEGFA-225ENST00000523950 SLC52A1Q9NWF4 448 aa18.79■□□□□ 0.6
VEGFA-225ENST00000523950 SETD5Q9C0A6 1442 aa18.79■□□□□ 0.6
VEGFA-225ENST00000523950 PIK3C2BO00750 1634 aa18.78■□□□□ 0.6
VEGFA-225ENST00000523950 POLR1AO95602 1720 aaPredicted RBP18.78■□□□□ 0.6
VEGFA-225ENST00000523950 PKD2Q13563 968 aa18.78■□□□□ 0.6
VEGFA-225ENST00000523950 PTPRTO14522 1441 aa18.77■□□□□ 0.6
VEGFA-225ENST00000523950 SPHKAPQ2M3C7 1700 aa18.77■□□□□ 0.59
VEGFA-225ENST00000523950 TRIM52Q96A61 297 aa18.76■□□□□ 0.59
VEGFA-225ENST00000523950 ADGRB3O60242 1522 aa18.75■□□□□ 0.59
VEGFA-225ENST00000523950 IDI1Q13907 227 aa18.73■□□□□ 0.59
VEGFA-225ENST00000523950 SLIT1O75093 1534 aa18.73■□□□□ 0.59
VEGFA-225ENST00000523950 ARHGAP23Q9P227 1491 aa18.72■□□□□ 0.59
VEGFA-225ENST00000523950 RAB3GAP2Q9H2M9 1393 aa18.7■□□□□ 0.58
VEGFA-225ENST00000523950 TRPM2O94759 1503 aa18.7■□□□□ 0.58
VEGFA-225ENST00000523950 HRCP23327 699 aa18.7■□□□□ 0.58
VEGFA-225ENST00000523950 ANKLE2Q86XL3 938 aa18.7■□□□□ 0.58
VEGFA-225ENST00000523950 NEURL4Q96JN8 1562 aa18.7■□□□□ 0.58
VEGFA-225ENST00000523950 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
VEGFA-225ENST00000523950 STAG3Q9UJ98 1225 aa18.7■□□□□ 0.58
VEGFA-225ENST00000523950 MED14O60244 1454 aa18.7■□□□□ 0.58
VEGFA-225ENST00000523950 TMEM131LA2VDJ0 1609 aa18.69■□□□□ 0.58
VEGFA-225ENST00000523950 NCKAP5LQ9HCH0 1330 aa18.69■□□□□ 0.58
VEGFA-225ENST00000523950 TMEM2Q9UHN6 1383 aa18.68■□□□□ 0.58
VEGFA-225ENST00000523950 SCAF11Q99590 1463 aaKnown RBP18.66■□□□□ 0.58
VEGFA-225ENST00000523950 MYO5BQ9ULV0 1848 aa18.66■□□□□ 0.58
VEGFA-225ENST00000523950 IQGAP1P46940 1657 aa18.65■□□□□ 0.58
VEGFA-225ENST00000523950 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.57
VEGFA-225ENST00000523950 EID1Q9Y6B2 187 aa18.64■□□□□ 0.57
VEGFA-225ENST00000523950 NPHP4O75161 1426 aaPredicted RBP18.64■□□□□ 0.57
VEGFA-225ENST00000523950 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
VEGFA-225ENST00000523950 KIF1BO60333 1816 aa18.63■□□□□ 0.57
VEGFA-225ENST00000523950 TXNDC2Q86VQ3 553 aa18.61■□□□□ 0.57
VEGFA-225ENST00000523950 ZFYVE9O95405 1425 aa18.6■□□□□ 0.57
VEGFA-225ENST00000523950 HDGFP51858 240 aaKnown RBP18.6■□□□□ 0.57
VEGFA-225ENST00000523950 RIMS2Q9UQ26 1411 aa18.58■□□□□ 0.57
VEGFA-225ENST00000523950 CHGAP10645 457 aaKnown RBP18.58■□□□□ 0.56
VEGFA-225ENST00000523950 LTKP29376 864 aa18.58■□□□□ 0.56
VEGFA-225ENST00000523950 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms