RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 A2ML1A8K2U0 1454 aa16.18■□□□□ 0.18
LAMA4-220ENST00000523765 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
LAMA4-220ENST00000523765 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
LAMA4-220ENST00000523765 TOM1O60784 492 aa16.17■□□□□ 0.18
LAMA4-220ENST00000523765 SPAG9O60271 1321 aaKnown RBP16.17■□□□□ 0.18
LAMA4-220ENST00000523765 A2MP01023 1474 aa16.16■□□□□ 0.18
LAMA4-220ENST00000523765 GGT6Q6P531 493 aa16.16■□□□□ 0.18
LAMA4-220ENST00000523765 RGS17Q9UGC6 210 aaPredicted RBP16.15■□□□□ 0.18
LAMA4-220ENST00000523765 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
LAMA4-220ENST00000523765 KCNA4P22459 653 aa16.14■□□□□ 0.17
LAMA4-220ENST00000523765 GPATCH8Q9UKJ3 1502 aaKnown RBP16.14■□□□□ 0.17
LAMA4-220ENST00000523765 ADGBQ8N7X0 1667 aa16.12■□□□□ 0.17
LAMA4-220ENST00000523765 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
LAMA4-220ENST00000523765 FBXO31Q5XUX0 539 aaPredicted RBP16.12■□□□□ 0.17
LAMA4-220ENST00000523765 CCDC18Q5T9S5 1454 aa16.1■□□□□ 0.17
LAMA4-220ENST00000523765 CASKIN1Q8WXD9 1431 aa16.1■□□□□ 0.17
LAMA4-220ENST00000523765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.09■□□□□ 0.17
LAMA4-220ENST00000523765 LRRC7Q96NW7 1537 aa16.07■□□□□ 0.16
LAMA4-220ENST00000523765 IQGAP1P46940 1657 aa16.06■□□□□ 0.16
LAMA4-220ENST00000523765 TNRQ92752 1358 aa16.06■□□□□ 0.16
LAMA4-220ENST00000523765 RNF17Q9BXT8 1623 aaKnown RBP16.05■□□□□ 0.16
LAMA4-220ENST00000523765 KIAA1107Q9UPP5 1409 aa16.05■□□□□ 0.16
LAMA4-220ENST00000523765 DEPDC5O75140 1603 aa16.05■□□□□ 0.16
LAMA4-220ENST00000523765 MED14O60244 1454 aa16.04■□□□□ 0.16
LAMA4-220ENST00000523765 NPHP4O75161 1426 aaPredicted RBP16.04■□□□□ 0.16
LAMA4-220ENST00000523765 XIRP1Q702N8 1843 aaKnown RBP16.04■□□□□ 0.16
LAMA4-220ENST00000523765 SETD1AO15047 1707 aaKnown RBP16.04■□□□□ 0.16
LAMA4-220ENST00000523765 ZNF644Q9H582 1327 aaPredicted RBP16.03■□□□□ 0.16
LAMA4-220ENST00000523765 PZPP20742 1482 aa16.03■□□□□ 0.16
LAMA4-220ENST00000523765 UGGT1Q9NYU2 1555 aa16.01■□□□□ 0.15
LAMA4-220ENST00000523765 POTEAQ6S8J7 498 aa16.01■□□□□ 0.15
LAMA4-220ENST00000523765 ANKLE2Q86XL3 938 aa16.01■□□□□ 0.15
LAMA4-220ENST00000523765 ZC3H13Q5T200 1668 aaKnown RBP16.01■□□□□ 0.15
LAMA4-220ENST00000523765 PLEKHH2Q8IVE3 1493 aa16■□□□□ 0.15
LAMA4-220ENST00000523765 MBD5Q9P267 1494 aa16■□□□□ 0.15
LAMA4-220ENST00000523765 CFDP1Q9UEE9 299 aaPredicted RBP16■□□□□ 0.15
LAMA4-220ENST00000523765 SYNMO15061 1565 aa16■□□□□ 0.15
LAMA4-220ENST00000523765 KDM5DQ9BY66 1539 aa15.99■□□□□ 0.15
LAMA4-220ENST00000523765 FYCO1Q9BQS8 1478 aa15.99■□□□□ 0.15
LAMA4-220ENST00000523765 TIAM1Q13009 1591 aa15.98■□□□□ 0.15
LAMA4-220ENST00000523765 DHX29Q7Z478 1369 aaKnown RBP15.98■□□□□ 0.15
LAMA4-220ENST00000523765 MIA2Q96PC5 1412 aa15.97■□□□□ 0.15
LAMA4-220ENST00000523765 KIF3BO15066 747 aa15.96■□□□□ 0.15
LAMA4-220ENST00000523765 CCNB3Q8WWL7 1395 aa15.96■□□□□ 0.15
LAMA4-220ENST00000523765 FAM135AQ9P2D6 1515 aa15.95■□□□□ 0.14
LAMA4-220ENST00000523765 THEMISQ8N1K5 641 aaPredicted RBP15.95■□□□□ 0.14
LAMA4-220ENST00000523765 NLRP1Q9C000 1473 aa15.95■□□□□ 0.14
LAMA4-220ENST00000523765 RNF39Q9H2S5 420 aa15.93■□□□□ 0.14
LAMA4-220ENST00000523765 RTEL1-TNFRSF6BF6WH68 1400 aa15.93■□□□□ 0.14
LAMA4-220ENST00000523765 UBR1Q8IWV7 1749 aa15.91■□□□□ 0.14
LAMA4-220ENST00000523765 WASHC2CQ9Y4E1 1318 aa15.91■□□□□ 0.14
LAMA4-220ENST00000523765 CFAP65Q6ZU64 1925 aaKnown RBP15.88■□□□□ 0.13
LAMA4-220ENST00000523765 ROBO1Q9Y6N7 1651 aa15.87■□□□□ 0.13
LAMA4-220ENST00000523765 NCOA2Q15596 1464 aa15.87■□□□□ 0.13
LAMA4-220ENST00000523765 ABCC3O15438 1527 aa15.86■□□□□ 0.13
LAMA4-220ENST00000523765 LTKP29376 864 aa15.86■□□□□ 0.13
LAMA4-220ENST00000523765 CEP152O94986 1710 aa15.85■□□□□ 0.13
LAMA4-220ENST00000523765 ERVK-7P63135 1459 aa15.85■□□□□ 0.13
LAMA4-220ENST00000523765 MTUS2Q5JR59 1369 aa15.85■□□□□ 0.13
LAMA4-220ENST00000523765 CCDC141Q6ZP82 1450 aa15.84■□□□□ 0.13
LAMA4-220ENST00000523765 SRCAPQ6ZRS2 3230 aa15.84■□□□□ 0.13
LAMA4-220ENST00000523765 MROH1Q8NDA8 1641 aa15.84■□□□□ 0.13
LAMA4-220ENST00000523765 FAM135BQ49AJ0 1406 aa15.84■□□□□ 0.13
LAMA4-220ENST00000523765 SCAF11Q99590 1463 aaKnown RBP15.84■□□□□ 0.13
LAMA4-220ENST00000523765 CAMSAP2Q08AD1 1489 aa15.83■□□□□ 0.12
LAMA4-220ENST00000523765 ARHGAP23Q9P227 1491 aa15.82■□□□□ 0.12
LAMA4-220ENST00000523765 MAP3K1Q13233 1512 aa15.81■□□□□ 0.12
LAMA4-220ENST00000523765 EHBP1L1Q8N3D4 1523 aa15.81■□□□□ 0.12
LAMA4-220ENST00000523765 RBM33Q96EV2 1170 aaKnown RBP15.81■□□□□ 0.12
LAMA4-220ENST00000523765 SLIT1O75093 1534 aa15.8■□□□□ 0.12
LAMA4-220ENST00000523765 CACNB1Q02641 598 aaPredicted RBP15.79■□□□□ 0.12
LAMA4-220ENST00000523765 CEP162Q5TB80 1403 aa15.77■□□□□ 0.12
LAMA4-220ENST00000523765 PHLPP1O60346 1717 aa15.77■□□□□ 0.12
LAMA4-220ENST00000523765 TMEM94Q12767 1356 aa15.77■□□□□ 0.12
LAMA4-220ENST00000523765 PIK3C2BO00750 1634 aa15.77■□□□□ 0.12
LAMA4-220ENST00000523765 TXNDC2Q86VQ3 553 aa15.77■□□□□ 0.12
LAMA4-220ENST00000523765 ARHGEF5Q12774 1597 aa15.76■□□□□ 0.11
LAMA4-220ENST00000523765 UPF1Q92900 1129 aaKnown RBP eCLIP15.76■□□□□ 0.11
LAMA4-220ENST00000523765 LRP6O75581 1613 aa15.75■□□□□ 0.11
LAMA4-220ENST00000523765 EIF2AK4Q9P2K8 1649 aaKnown RBP15.74■□□□□ 0.11
LAMA4-220ENST00000523765 COL16A1Q07092 1604 aaPredicted RBP15.72■□□□□ 0.11
LAMA4-220ENST00000523765 TET3O43151 1660 aa15.71■□□□□ 0.11
LAMA4-220ENST00000523765 MAST1Q9Y2H9 1570 aa15.7■□□□□ 0.1
LAMA4-220ENST00000523765 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
LAMA4-220ENST00000523765 PRDM15P57071 1507 aaPredicted RBP15.68■□□□□ 0.1
LAMA4-220ENST00000523765 NWD1Q149M9 1564 aa15.68■□□□□ 0.1
LAMA4-220ENST00000523765 TMEM2Q9UHN6 1383 aa15.68■□□□□ 0.1
LAMA4-220ENST00000523765 PROSER2Q86WR7 435 aaPredicted RBP15.68■□□□□ 0.1
LAMA4-220ENST00000523765 SLC26A8Q96RN1 970 aa15.68■□□□□ 0.1
LAMA4-220ENST00000523765 JCADQ9P266 1359 aa15.67■□□□□ 0.1
LAMA4-220ENST00000523765 LRRC9Q6ZRR7 1453 aa15.66■□□□□ 0.1
LAMA4-220ENST00000523765 KCNA6P17658 529 aa15.66■□□□□ 0.1
LAMA4-220ENST00000523765 RSPH4AQ5TD94 716 aa15.66■□□□□ 0.1
LAMA4-220ENST00000523765 TSPY4P0CV99 314 aa15.65■□□□□ 0.1
LAMA4-220ENST00000523765 TSPY10P0CW01 314 aa15.65■□□□□ 0.1
LAMA4-220ENST00000523765 EID1Q9Y6B2 187 aa15.65■□□□□ 0.1
LAMA4-220ENST00000523765 EFCAB6Q5THR3 1501 aa15.63■□□□□ 0.09
LAMA4-220ENST00000523765 ARHGAP31Q2M1Z3 1444 aa15.63■□□□□ 0.09
LAMA4-220ENST00000523765 SLAIN2Q9P270 581 aa15.63■□□□□ 0.09
LAMA4-220ENST00000523765 NKTRP30414 1462 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms