RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 DEPDC5O75140 1603 aa36.01■■■■□ 3.35
PVT1-212ENST00000521951 HRCP23327 699 aa36■■■■□ 3.35
PVT1-212ENST00000521951 MLECQ14165 292 aa36■■■■□ 3.35
PVT1-212ENST00000521951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.98■■■■□ 3.351e-6■■■■□ 19.8
PVT1-212ENST00000521951 MROH1Q8NDA8 1641 aa35.98■■■■□ 3.35
PVT1-212ENST00000521951 UNC13BO14795 1591 aa35.98■■■■□ 3.35
PVT1-212ENST00000521951 TRIM52Q96A61 297 aa35.94■■■■□ 3.34
PVT1-212ENST00000521951 PRDM15P57071 1507 aaPredicted RBP35.93■■■■□ 3.34
PVT1-212ENST00000521951 NUP155O75694 1391 aa35.92■■■■□ 3.34
PVT1-212ENST00000521951 ACIN1Q9UKV3 1341 aaKnown RBP35.91■■■■□ 3.34
PVT1-212ENST00000521951 KANK1Q14678 1352 aa35.89■■■■□ 3.34
PVT1-212ENST00000521951 PPP6R1Q9UPN7 881 aa35.89■■■■□ 3.34
PVT1-212ENST00000521951 VWDEQ8N2E2 1590 aa35.87■■■■□ 3.33
PVT1-212ENST00000521951 KDM5DQ9BY66 1539 aa35.85■■■■□ 3.33
PVT1-212ENST00000521951 WASHC2CQ9Y4E1 1318 aa35.84■■■■□ 3.33
PVT1-212ENST00000521951 IQGAP3Q86VI3 1631 aa35.84■■■■□ 3.33
PVT1-212ENST00000521951 CEP152O94986 1710 aa35.82■■■■□ 3.32
PVT1-212ENST00000521951 ABCC3O15438 1527 aa35.8■■■■□ 3.32
PVT1-212ENST00000521951 FAM135AQ9P2D6 1515 aa35.8■■■■□ 3.32
PVT1-212ENST00000521951 ADAMTSL3P82987 1691 aa35.8■■■■□ 3.32
PVT1-212ENST00000521951 PZPP20742 1482 aa35.8■■■■□ 3.32
PVT1-212ENST00000521951 ESF1Q9H501 851 aaKnown RBP35.78■■■■□ 3.32
PVT1-212ENST00000521951 ZC3H13Q5T200 1668 aaKnown RBP35.78■■■■□ 3.32
PVT1-212ENST00000521951 CLTCQ00610 1675 aaKnown RBP35.77■■■■□ 3.32
PVT1-212ENST00000521951 FER1L4A9Z1Z3 1794 aa35.77■■■■□ 3.32
PVT1-212ENST00000521951 LMTK2Q8IWU2 1503 aa35.77■■■■□ 3.32
PVT1-212ENST00000521951 MPHOSPH9Q99550 1183 aa35.74■■■■□ 3.31
PVT1-212ENST00000521951 SLC4A1APQ9BWU0 796 aaKnown RBP35.74■■■■□ 3.31
PVT1-212ENST00000521951 MADDQ8WXG6 1647 aa35.74■■■■□ 3.31
PVT1-212ENST00000521951 CNTLNQ9NXG0 1405 aa35.72■■■■□ 3.31
PVT1-212ENST00000521951 TET3O43151 1660 aa35.72■■■■□ 3.31
PVT1-212ENST00000521951 CAMSAP1Q5T5Y3 1602 aa35.7■■■■□ 3.31
PVT1-212ENST00000521951 RIMS1Q86UR5 1692 aaKnown RBP35.66■■■■□ 3.3
PVT1-212ENST00000521951 PKD2Q13563 968 aa35.66■■■■□ 3.3
PVT1-212ENST00000521951 MROH2AA6NES4 1674 aa35.66■■■■□ 3.3
PVT1-212ENST00000521951 EFCAB6Q5THR3 1501 aa35.66■■■■□ 3.3
PVT1-212ENST00000521951 ZMYM3Q14202 1370 aa35.65■■■■□ 3.3
PVT1-212ENST00000521951 E9PCH4 1651 aa35.63■■■■□ 3.29
PVT1-212ENST00000521951 ARHGAP31Q2M1Z3 1444 aa35.62■■■■□ 3.29
PVT1-212ENST00000521951 KDM4FA0A1W2PPD8 638 aa35.62■■■■□ 3.29
PVT1-212ENST00000521951 DHX57Q6P158 1386 aaKnown RBP35.62■■■■□ 3.29
PVT1-212ENST00000521951 CFAP65Q6ZU64 1925 aaKnown RBP35.6■■■■□ 3.29
PVT1-212ENST00000521951 NPATQ14207 1427 aa35.59■■■■□ 3.29
PVT1-212ENST00000521951 FOXD1Q16676 465 aa35.57■■■■□ 3.29
PVT1-212ENST00000521951 C3P01024 1663 aa35.56■■■■□ 3.28
PVT1-212ENST00000521951 CEBPAP49715 358 aaPredicted RBP35.56■■■■□ 3.28
PVT1-212ENST00000521951 RPRD2Q5VT52 1461 aaKnown RBP35.55■■■■□ 3.28
PVT1-212ENST00000521951 FBXO31Q5XUX0 539 aaPredicted RBP35.52■■■■□ 3.28
PVT1-212ENST00000521951 PTPRMP28827 1452 aa35.51■■■■□ 3.28
PVT1-212ENST00000521951 PLPPR3Q6T4P5 718 aa35.5■■■■□ 3.27
PVT1-212ENST00000521951 PREX1Q8TCU6 1659 aa35.48■■■■□ 3.27
PVT1-212ENST00000521951 ERVK-7P63135 1459 aa35.46■■■■□ 3.27
PVT1-212ENST00000521951 NOS1P29475 1434 aa35.44■■■■□ 3.26
PVT1-212ENST00000521951 SPHKAPQ2M3C7 1700 aa35.44■■■■□ 3.26
PVT1-212ENST00000521951 PTPRTO14522 1441 aa35.44■■■■□ 3.26
PVT1-212ENST00000521951 PLA2R1Q13018 1463 aa35.43■■■■□ 3.26
PVT1-212ENST00000521951 SPATA31D1Q6ZQQ2 1576 aa35.42■■■■□ 3.26
PVT1-212ENST00000521951 ANKRD30BQ9BXX2 1392 aa35.41■■■■□ 3.26
PVT1-212ENST00000521951 SYNMO15061 1565 aa35.38■■■■□ 3.25
PVT1-212ENST00000521951 CCER1Q8TC90 406 aaPredicted RBP35.37■■■■□ 3.25
PVT1-212ENST00000521951 TRPM2O94759 1503 aa35.36■■■■□ 3.25
PVT1-212ENST00000521951 TNRQ92752 1358 aa35.35■■■■□ 3.25
PVT1-212ENST00000521951 SETD1BQ9UPS6 1966 aaKnown RBP35.31■■■■□ 3.24
PVT1-212ENST00000521951 UGGT1Q9NYU2 1555 aa35.3■■■■□ 3.24
PVT1-212ENST00000521951 SLC52A1Q9NWF4 448 aa35.28■■■■□ 3.24
PVT1-212ENST00000521951 CLTCL1P53675 1640 aa35.27■■■■□ 3.24
PVT1-212ENST00000521951 PIK3C2BO00750 1634 aa35.27■■■■□ 3.24
PVT1-212ENST00000521951 IDI1Q13907 227 aa35.27■■■■□ 3.24
PVT1-212ENST00000521951 CCDC144AA2RUR9 1427 aa35.26■■■■□ 3.24
PVT1-212ENST00000521951 CLSPNQ9HAW4 1339 aa35.25■■■■□ 3.23
PVT1-212ENST00000521951 SIN3AQ96ST3 1273 aa35.23■■■■□ 3.23
PVT1-212ENST00000521951 NLRP1Q9C000 1473 aa35.2■■■■□ 3.23
PVT1-212ENST00000521951 MYO3AQ8NEV4 1616 aa35.19■■■■□ 3.22
PVT1-212ENST00000521951 KIF1BO60333 1816 aa35.16■■■■□ 3.22
PVT1-212ENST00000521951 NEUROD1Q13562 356 aa35.16■■■■□ 3.22
PVT1-212ENST00000521951 CHGAP10645 457 aaKnown RBP35.13■■■■□ 3.21
PVT1-212ENST00000521951 A2ML1A8K2U0 1454 aa35.12■■■■□ 3.21
PVT1-212ENST00000521951 UHRF1BP1Q6BDS2 1440 aa35.11■■■■□ 3.21
PVT1-212ENST00000521951 TMEM131LA2VDJ0 1609 aa35.1■■■■□ 3.21
PVT1-212ENST00000521951 CEP170BQ9Y4F5 1589 aaPredicted RBP35.1■■■■□ 3.21
PVT1-212ENST00000521951 STAG3Q9UJ98 1225 aa35.1■■■■□ 3.21
PVT1-212ENST00000521951 ZNF142P52746 1687 aaPredicted RBP35.09■■■■□ 3.21
PVT1-212ENST00000521951 ADGRB3O60242 1522 aa35.08■■■■□ 3.21
PVT1-212ENST00000521951 MYO5BQ9ULV0 1848 aa35.08■■■■□ 3.21
PVT1-212ENST00000521951 SPATA31E1Q6ZUB1 1445 aa35.08■■■■□ 3.21
PVT1-212ENST00000521951 UBR1Q8IWV7 1749 aa35.08■■■■□ 3.21
PVT1-212ENST00000521951 KDM5AP29375 1690 aaKnown RBP35.06■■■■□ 3.2
PVT1-212ENST00000521951 RGL3Q3MIN7 710 aa35.03■■■■□ 3.2
PVT1-212ENST00000521951 NEURL4Q96JN8 1562 aa35.03■■■■□ 3.2
PVT1-212ENST00000521951 ZNF326Q5BKZ1 582 aaKnown RBP34.99■■■■□ 3.19
PVT1-212ENST00000521951 THEMISQ8N1K5 641 aaPredicted RBP34.99■■■■□ 3.19
PVT1-212ENST00000521951 LMTK3Q96Q04 1460 aa34.94■■■■□ 3.18
PVT1-212ENST00000521951 TONSLQ96HA7 1378 aa34.92■■■■□ 3.18
PVT1-212ENST00000521951 RPGRIP1LQ68CZ1 1315 aa34.92■■■■□ 3.18
PVT1-212ENST00000521951 L3MBTL2Q969R5 705 aa34.91■■■■□ 3.18
PVT1-212ENST00000521951 TMEM2Q9UHN6 1383 aa34.91■■■■□ 3.18
PVT1-212ENST00000521951 AEBP2Q6ZN18 517 aaPredicted RBP34.89■■■■□ 3.18
PVT1-212ENST00000521951 RIMS2Q9UQ26 1411 aa34.88■■■■□ 3.17
PVT1-212ENST00000521951 SLIT1O75093 1534 aa34.88■■■■□ 3.17
PVT1-212ENST00000521951 NEXMIFQ5QGS0 1516 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms