RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	KDM5D	Q9BY66	1539 aa		12.84	□□□□□ -0.35
CTNNA1-231	ENST00000521941	ITGAE	P38570	1179 aa		12.84	□□□□□ -0.35
CTNNA1-231	ENST00000521941	ANKRD30A	Q9BXX3	1397 aa		12.83	□□□□□ -0.36
CTNNA1-231	ENST00000521941	CEP152	O94986	1710 aa		12.83	□□□□□ -0.36
CTNNA1-231	ENST00000521941	ZMYM3	Q14202	1370 aa		12.81	□□□□□ -0.36
CTNNA1-231	ENST00000521941	MROH1	Q8NDA8	1641 aa		12.81	□□□□□ -0.36
CTNNA1-231	ENST00000521941	UHRF1BP1	Q6BDS2	1440 aa		12.81	□□□□□ -0.36
CTNNA1-231	ENST00000521941	ERBIN	Q96RT1	1412 aa		12.81	□□□□□ -0.36
CTNNA1-231	ENST00000521941	ADGRL2	O95490	1459 aa		12.81	□□□□□ -0.36
CTNNA1-231	ENST00000521941	HSPA2	P54652	639 aa		12.81	□□□□□ -0.36
CTNNA1-231	ENST00000521941	ZC3H13	Q5T200	1668 aa	Known RBP	12.8	□□□□□ -0.36
CTNNA1-231	ENST00000521941	WASHC2C	Q9Y4E1	1318 aa		12.8	□□□□□ -0.36
CTNNA1-231	ENST00000521941	PTPRK	Q15262	1439 aa		12.79	□□□□□ -0.36
CTNNA1-231	ENST00000521941	NCOA1	Q15788	1441 aa		12.79	□□□□□ -0.36
CTNNA1-231	ENST00000521941	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
CTNNA1-231	ENST00000521941	MYO3A	Q8NEV4	1616 aa		12.79	□□□□□ -0.36
CTNNA1-231	ENST00000521941	ABCC3	O15438	1527 aa		12.78	□□□□□ -0.36
CTNNA1-231	ENST00000521941	FAM135A	Q9P2D6	1515 aa		12.78	□□□□□ -0.36
CTNNA1-231	ENST00000521941	RRBP1	Q9P2E9	1410 aa	Known RBP	12.78	□□□□□ -0.36
CTNNA1-231	ENST00000521941	SETD1B	Q9UPS6	1966 aa	Known RBP	12.78	□□□□□ -0.36
CTNNA1-231	ENST00000521941	PRDM15	P57071	1507 aa	Predicted RBP	12.78	□□□□□ -0.36
CTNNA1-231	ENST00000521941	DEPDC5	O75140	1603 aa		12.77	□□□□□ -0.36
CTNNA1-231	ENST00000521941	CAMSAP1	Q5T5Y3	1602 aa		12.77	□□□□□ -0.36
CTNNA1-231	ENST00000521941	PPP6R1	Q9UPN7	881 aa		12.77	□□□□□ -0.37
CTNNA1-231	ENST00000521941	NPAT	Q14207	1427 aa		12.76	□□□□□ -0.37
CTNNA1-231	ENST00000521941	CFAP65	Q6ZU64	1925 aa	Known RBP	12.76	□□□□□ -0.37
CTNNA1-231	ENST00000521941	PZP	P20742	1482 aa		12.75	□□□□□ -0.37
CTNNA1-231	ENST00000521941	ANKRD50	Q9ULJ7	1429 aa		12.75	□□□□□ -0.37
CTNNA1-231	ENST00000521941	KANK1	Q14678	1352 aa		12.74	□□□□□ -0.37
CTNNA1-231	ENST00000521941	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.74	□□□□□ -0.37
CTNNA1-231	ENST00000521941	ZNF142	P52746	1687 aa	Predicted RBP	12.73	□□□□□ -0.37
CTNNA1-231	ENST00000521941	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.73	□□□□□ -0.37
CTNNA1-231	ENST00000521941	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.73	□□□□□ -0.37
CTNNA1-231	ENST00000521941	TNR	Q92752	1358 aa		12.72	□□□□□ -0.37
CTNNA1-231	ENST00000521941	ROCK1	Q13464	1354 aa		12.71	□□□□□ -0.37
CTNNA1-231	ENST00000521941	UNC13B	O14795	1591 aa		12.7	□□□□□ -0.38
CTNNA1-231	ENST00000521941	ERVK-7	P63135	1459 aa		12.7	□□□□□ -0.38
CTNNA1-231	ENST00000521941	STRC	Q7RTU9	1775 aa		12.69	□□□□□ -0.38
CTNNA1-231	ENST00000521941	GCC2	Q8IWJ2	1684 aa		12.69	□□□□□ -0.38
CTNNA1-231	ENST00000521941	SPATA31D1	Q6ZQQ2	1576 aa		12.69	□□□□□ -0.38
CTNNA1-231	ENST00000521941	VWDE	Q8N2E2	1590 aa		12.69	□□□□□ -0.38
CTNNA1-231	ENST00000521941	EFCAB6	Q5THR3	1501 aa		12.67	□□□□□ -0.38
CTNNA1-231	ENST00000521941	A2ML1	A8K2U0	1454 aa		12.67	□□□□□ -0.38
CTNNA1-231	ENST00000521941	LMTK2	Q8IWU2	1503 aa		12.67	□□□□□ -0.38
CTNNA1-231	ENST00000521941	TET3	O43151	1660 aa		12.66	□□□□□ -0.38
CTNNA1-231	ENST00000521941	IQGAP3	Q86VI3	1631 aa		12.65	□□□□□ -0.38
CTNNA1-231	ENST00000521941	NLRP1	Q9C000	1473 aa		12.65	□□□□□ -0.38
CTNNA1-231	ENST00000521941	UGGT1	Q9NYU2	1555 aa		12.64	□□□□□ -0.39
CTNNA1-231	ENST00000521941	ARHGAP31	Q2M1Z3	1444 aa		12.64	□□□□□ -0.39
CTNNA1-231	ENST00000521941	NAIP	Q13075	1403 aa		12.63	□□□□□ -0.39
CTNNA1-231	ENST00000521941	POLR1A	O95602	1720 aa	Predicted RBP	12.63	□□□□□ -0.39
CTNNA1-231	ENST00000521941		E9PCH4	1651 aa		12.62	□□□□□ -0.39
CTNNA1-231	ENST00000521941	SYNM	O15061	1565 aa		12.62	□□□□□ -0.39
CTNNA1-231	ENST00000521941	NUP155	O75694	1391 aa		12.62	□□□□□ -0.39
CTNNA1-231	ENST00000521941	UBR1	Q8IWV7	1749 aa		12.62	□□□□□ -0.39
CTNNA1-231	ENST00000521941	PIK3C2B	O00750	1634 aa		12.62	□□□□□ -0.39
CTNNA1-231	ENST00000521941	NCKAP5L	Q9HCH0	1330 aa		12.62	□□□□□ -0.39
CTNNA1-231	ENST00000521941	PLA2R1	Q13018	1463 aa		12.61	□□□□□ -0.39
CTNNA1-231	ENST00000521941	HFM1	A2PYH4	1435 aa		12.61	□□□□□ -0.39
CTNNA1-231	ENST00000521941	RPRD2	Q5VT52	1461 aa	Known RBP	12.59	□□□□□ -0.39
CTNNA1-231	ENST00000521941	TRIM52	Q96A61	297 aa		12.58	□□□□□ -0.4
CTNNA1-231	ENST00000521941	STAG3	Q9UJ98	1225 aa		12.58	□□□□□ -0.4
CTNNA1-231	ENST00000521941	NEURL4	Q96JN8	1562 aa		12.57	□□□□□ -0.4
CTNNA1-231	ENST00000521941	PTPRT	O14522	1441 aa		12.57	□□□□□ -0.4
CTNNA1-231	ENST00000521941	NOS1	P29475	1434 aa		12.57	□□□□□ -0.4
CTNNA1-231	ENST00000521941	DMRT2	Q9Y5R5	561 aa		12.57	□□□□□ -0.4
CTNNA1-231	ENST00000521941	MYO5B	Q9ULV0	1848 aa		12.56	□□□□□ -0.4
CTNNA1-231	ENST00000521941	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.56	□□□□□ -0.4
CTNNA1-231	ENST00000521941	SPHKAP	Q2M3C7	1700 aa		12.56	□□□□□ -0.4
CTNNA1-231	ENST00000521941	ADGRB3	O60242	1522 aa		12.56	□□□□□ -0.4
CTNNA1-231	ENST00000521941	PKD2	Q13563	968 aa		12.55	□□□□□ -0.4
CTNNA1-231	ENST00000521941	IDI1	Q13907	227 aa		12.54	□□□□□ -0.4
CTNNA1-231	ENST00000521941	IQGAP1	P46940	1657 aa		12.54	□□□□□ -0.4
CTNNA1-231	ENST00000521941	CHGA	P10645	457 aa	Known RBP	12.53	□□□□□ -0.4
CTNNA1-231	ENST00000521941	ANKLE2	Q86XL3	938 aa		12.53	□□□□□ -0.4
CTNNA1-231	ENST00000521941	KDM5A	P29375	1690 aa	Known RBP	12.52	□□□□□ -0.4
CTNNA1-231	ENST00000521941	NPHP4	O75161	1426 aa	Predicted RBP	12.52	□□□□□ -0.41
CTNNA1-231	ENST00000521941	SCAF11	Q99590	1463 aa	Known RBP	12.52	□□□□□ -0.41
CTNNA1-231	ENST00000521941	SENP3	Q9H4L4	574 aa	Predicted RBP	12.51	□□□□□ -0.41
CTNNA1-231	ENST00000521941	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	12.51	□□□□□ -0.41
CTNNA1-231	ENST00000521941	SLIT1	O75093	1534 aa		12.51	□□□□□ -0.41
CTNNA1-231	ENST00000521941	SLC52A1	Q9NWF4	448 aa		12.5	□□□□□ -0.41
CTNNA1-231	ENST00000521941	SETD5	Q9C0A6	1442 aa		12.5	□□□□□ -0.41
CTNNA1-231	ENST00000521941	ARHGAP23	Q9P227	1491 aa		12.5	□□□□□ -0.41
CTNNA1-231	ENST00000521941	TMEM131L	A2VDJ0	1609 aa		12.5	□□□□□ -0.41
CTNNA1-231	ENST00000521941	CLTCL1	P53675	1640 aa		12.49	□□□□□ -0.41
CTNNA1-231	ENST00000521941	TMEM2	Q9UHN6	1383 aa		12.49	□□□□□ -0.41
CTNNA1-231	ENST00000521941	TXNDC2	Q86VQ3	553 aa		12.49	□□□□□ -0.41
CTNNA1-231	ENST00000521941	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.49	□□□□□ -0.41
CTNNA1-231	ENST00000521941	LTBP4	Q8N2S1	1624 aa		12.48	□□□□□ -0.41
CTNNA1-231	ENST00000521941	MED14	O60244	1454 aa		12.48	□□□□□ -0.41
CTNNA1-231	ENST00000521941	EID1	Q9Y6B2	187 aa		12.48	□□□□□ -0.41
CTNNA1-231	ENST00000521941	TRPM2	O94759	1503 aa		12.47	□□□□□ -0.41
CTNNA1-231	ENST00000521941	RAB3GAP2	Q9H2M9	1393 aa		12.47	□□□□□ -0.41
CTNNA1-231	ENST00000521941	LTK	P29376	864 aa		12.47	□□□□□ -0.41
CTNNA1-231	ENST00000521941	CERK	Q8TCT0	537 aa		12.47	□□□□□ -0.41
CTNNA1-231	ENST00000521941	FOXD1	Q16676	465 aa		12.46	□□□□□ -0.41
CTNNA1-231	ENST00000521941	KIF1B	O60333	1816 aa		12.46	□□□□□ -0.42
CTNNA1-231	ENST00000521941	RIMS2	Q9UQ26	1411 aa		12.45	□□□□□ -0.42
CTNNA1-231	ENST00000521941	PPP1R15A	O75807	674 aa	Predicted RBP	12.45	□□□□□ -0.42

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