RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 SETD5Q9C0A6 1442 aa32.66■■■□□ 2.82
PTP4A3-204ENST00000521578 BCORL1Q5H9F3 1711 aa32.65■■■□□ 2.82
PTP4A3-204ENST00000521578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.63■■■□□ 2.81
PTP4A3-204ENST00000521578 RNF17Q9BXT8 1623 aaKnown RBP32.59■■■□□ 2.81
PTP4A3-204ENST00000521578 RAB3GAP2Q9H2M9 1393 aa32.58■■■□□ 2.81
PTP4A3-204ENST00000521578 MROH1Q8NDA8 1641 aa32.56■■■□□ 2.8
PTP4A3-204ENST00000521578 DEPDC5O75140 1603 aa32.56■■■□□ 2.8
PTP4A3-204ENST00000521578 PRDM15P57071 1507 aaPredicted RBP32.52■■■□□ 2.8
PTP4A3-204ENST00000521578 UNC13BO14795 1591 aa32.51■■■□□ 2.8
PTP4A3-204ENST00000521578 TRIM52Q96A61 297 aa32.51■■■□□ 2.79
PTP4A3-204ENST00000521578 ESF1Q9H501 851 aaKnown RBP32.5■■■□□ 2.79
PTP4A3-204ENST00000521578 WASHC2CQ9Y4E1 1318 aa32.5■■■□□ 2.79
PTP4A3-204ENST00000521578 ADAMTSL3P82987 1691 aa32.49■■■□□ 2.79
PTP4A3-204ENST00000521578 NUP155O75694 1391 aa32.49■■■□□ 2.79
PTP4A3-204ENST00000521578 KANK1Q14678 1352 aa32.49■■■□□ 2.79
PTP4A3-204ENST00000521578 PPP6R1Q9UPN7 881 aa32.48■■■□□ 2.79
PTP4A3-204ENST00000521578 FER1L4A9Z1Z3 1794 aa32.48■■■□□ 2.79
PTP4A3-204ENST00000521578 MADDQ8WXG6 1647 aa32.48■■■□□ 2.79
PTP4A3-204ENST00000521578 KDM5DQ9BY66 1539 aa32.44■■■□□ 2.78
PTP4A3-204ENST00000521578 CLTCQ00610 1675 aaKnown RBP32.44■■■□□ 2.78
PTP4A3-204ENST00000521578 CEP152O94986 1710 aa32.43■■■□□ 2.78
PTP4A3-204ENST00000521578 KDM4FA0A1W2PPD8 638 aa32.43■■■□□ 2.78
PTP4A3-204ENST00000521578 ABCC3O15438 1527 aa32.42■■■□□ 2.78
PTP4A3-204ENST00000521578 VWDEQ8N2E2 1590 aa32.42■■■□□ 2.78
PTP4A3-204ENST00000521578 RIMS1Q86UR5 1692 aaKnown RBP32.4■■■□□ 2.78
PTP4A3-204ENST00000521578 ZC3H13Q5T200 1668 aaKnown RBP32.38■■■□□ 2.77
PTP4A3-204ENST00000521578 IQGAP3Q86VI3 1631 aa32.38■■■□□ 2.77
PTP4A3-204ENST00000521578 FAM135AQ9P2D6 1515 aa32.38■■■□□ 2.77
PTP4A3-204ENST00000521578 CNTLNQ9NXG0 1405 aa32.38■■■□□ 2.77
PTP4A3-204ENST00000521578 PLPPR3Q6T4P5 718 aa32.35■■■□□ 2.77
PTP4A3-204ENST00000521578 ACIN1Q9UKV3 1341 aaKnown RBP32.35■■■□□ 2.77
PTP4A3-204ENST00000521578 ZMYM3Q14202 1370 aa32.34■■■□□ 2.77
PTP4A3-204ENST00000521578 PZPP20742 1482 aa32.34■■■□□ 2.77
PTP4A3-204ENST00000521578 LMTK2Q8IWU2 1503 aa32.33■■■□□ 2.77
PTP4A3-204ENST00000521578 CAMSAP1Q5T5Y3 1602 aa32.33■■■□□ 2.77
PTP4A3-204ENST00000521578 SLC4A1APQ9BWU0 796 aaKnown RBP32.32■■■□□ 2.76
PTP4A3-204ENST00000521578 CEBPAP49715 358 aaPredicted RBP32.31■■■□□ 2.76
PTP4A3-204ENST00000521578 MROH2AA6NES4 1674 aa32.31■■■□□ 2.76
PTP4A3-204ENST00000521578 TET3O43151 1660 aa32.29■■■□□ 2.76
PTP4A3-204ENST00000521578 MPHOSPH9Q99550 1183 aa32.29■■■□□ 2.76
PTP4A3-204ENST00000521578 CLSPNQ9HAW4 1339 aa32.28■■■□□ 2.76
PTP4A3-204ENST00000521578 PTPRMP28827 1452 aa32.28■■■□□ 2.76
PTP4A3-204ENST00000521578 EFCAB6Q5THR3 1501 aa32.27■■■□□ 2.76
PTP4A3-204ENST00000521578 C3P01024 1663 aa32.27■■■□□ 2.76
PTP4A3-204ENST00000521578 CFAP65Q6ZU64 1925 aaKnown RBP32.25■■■□□ 2.75
PTP4A3-204ENST00000521578 PKD2Q13563 968 aa32.24■■■□□ 2.75
PTP4A3-204ENST00000521578 NPATQ14207 1427 aa32.24■■■□□ 2.75
PTP4A3-204ENST00000521578 DHX57Q6P158 1386 aaKnown RBP32.23■■■□□ 2.75
PTP4A3-204ENST00000521578 FBXO31Q5XUX0 539 aaPredicted RBP32.23■■■□□ 2.75
PTP4A3-204ENST00000521578 E9PCH4 1651 aa32.22■■■□□ 2.75
PTP4A3-204ENST00000521578 ARHGAP31Q2M1Z3 1444 aa32.22■■■□□ 2.75
PTP4A3-204ENST00000521578 FOXD1Q16676 465 aa32.2■■■□□ 2.74
PTP4A3-204ENST00000521578 RPRD2Q5VT52 1461 aaKnown RBP32.16■■■□□ 2.74
PTP4A3-204ENST00000521578 PREX1Q8TCU6 1659 aa32.13■■■□□ 2.73
PTP4A3-204ENST00000521578 ERVK-7P63135 1459 aa32.12■■■□□ 2.73
PTP4A3-204ENST00000521578 SPATA31D1Q6ZQQ2 1576 aa32.08■■■□□ 2.73
PTP4A3-204ENST00000521578 NOS1P29475 1434 aa32.07■■■□□ 2.72
PTP4A3-204ENST00000521578 TNRQ92752 1358 aa32.06■■■□□ 2.72
PTP4A3-204ENST00000521578 SPHKAPQ2M3C7 1700 aa32.05■■■□□ 2.72
PTP4A3-204ENST00000521578 SYNMO15061 1565 aa32.03■■■□□ 2.72
PTP4A3-204ENST00000521578 PLA2R1Q13018 1463 aa32.02■■■□□ 2.72
PTP4A3-204ENST00000521578 PTPRTO14522 1441 aa32.02■■■□□ 2.72
PTP4A3-204ENST00000521578 SETD1BQ9UPS6 1966 aaKnown RBP32.01■■■□□ 2.72
PTP4A3-204ENST00000521578 UGGT1Q9NYU2 1555 aa31.98■■■□□ 2.71
PTP4A3-204ENST00000521578 TRPM2O94759 1503 aa31.97■■■□□ 2.71
PTP4A3-204ENST00000521578 ANKRD30BQ9BXX2 1392 aa31.95■■■□□ 2.71
PTP4A3-204ENST00000521578 IDI1Q13907 227 aa31.95■■■□□ 2.7
PTP4A3-204ENST00000521578 MYO3AQ8NEV4 1616 aa31.94■■■□□ 2.7
PTP4A3-204ENST00000521578 ZNF316A6NFI3 1004 aaPredicted RBP31.93■■■□□ 2.7
PTP4A3-204ENST00000521578 SLC52A1Q9NWF4 448 aa31.93■■■□□ 2.7
PTP4A3-204ENST00000521578 UHRF1BP1Q6BDS2 1440 aa31.9■■■□□ 2.7
PTP4A3-204ENST00000521578 CLTCL1P53675 1640 aa31.9■■■□□ 2.7
PTP4A3-204ENST00000521578 AEBP2Q6ZN18 517 aaPredicted RBP31.9■■■□□ 2.7
PTP4A3-204ENST00000521578 NLRP1Q9C000 1473 aa31.9■■■□□ 2.7
PTP4A3-204ENST00000521578 PIK3C2BO00750 1634 aa31.9■■■□□ 2.7
PTP4A3-204ENST00000521578 CCDC144AA2RUR9 1427 aa31.9■■■□□ 2.7
PTP4A3-204ENST00000521578 CHGAP10645 457 aaKnown RBP31.86■■■□□ 2.69
PTP4A3-204ENST00000521578 CEP170BQ9Y4F5 1589 aaPredicted RBP31.85■■■□□ 2.69
PTP4A3-204ENST00000521578 STAG3Q9UJ98 1225 aa31.85■■■□□ 2.69
PTP4A3-204ENST00000521578 A2ML1A8K2U0 1454 aa31.84■■■□□ 2.69
PTP4A3-204ENST00000521578 ZNF142P52746 1687 aaPredicted RBP31.81■■■□□ 2.68
PTP4A3-204ENST00000521578 DIEXFQ68CQ4 756 aaKnown RBP31.8■■■□□ 2.68
PTP4A3-204ENST00000521578 SIN3AQ96ST3 1273 aa31.8■■■□□ 2.68
PTP4A3-204ENST00000521578 UBR1Q8IWV7 1749 aa31.78■■■□□ 2.68
PTP4A3-204ENST00000521578 KIF1BO60333 1816 aa31.78■■■□□ 2.68
PTP4A3-204ENST00000521578 ADGRB3O60242 1522 aa31.78■■■□□ 2.68
PTP4A3-204ENST00000521578 LMTK3Q96Q04 1460 aa31.78■■■□□ 2.68
PTP4A3-204ENST00000521578 TMEM131LA2VDJ0 1609 aa31.77■■■□□ 2.68
PTP4A3-204ENST00000521578 MYO5BQ9ULV0 1848 aa31.76■■■□□ 2.68
PTP4A3-204ENST00000521578 NEUROD1Q13562 356 aa31.76■■■□□ 2.67
PTP4A3-204ENST00000521578 THEMISQ8N1K5 641 aaPredicted RBP31.74■■■□□ 2.67
PTP4A3-204ENST00000521578 HSPA2P54652 639 aa31.73■■■□□ 2.67
PTP4A3-204ENST00000521578 RGL3Q3MIN7 710 aa31.72■■■□□ 2.67
PTP4A3-204ENST00000521578 KDM5AP29375 1690 aaKnown RBP31.72■■■□□ 2.67
PTP4A3-204ENST00000521578 ZNF326Q5BKZ1 582 aaKnown RBP31.71■■■□□ 2.67
PTP4A3-204ENST00000521578 SPATA31E1Q6ZUB1 1445 aa31.69■■■□□ 2.66
PTP4A3-204ENST00000521578 TMEM2Q9UHN6 1383 aa31.64■■■□□ 2.66
PTP4A3-204ENST00000521578 NUTM2DQ5VT03 806 aaPredicted RBP31.62■■■□□ 2.65
PTP4A3-204ENST00000521578 NEURL4Q96JN8 1562 aa31.6■■■□□ 2.65
PTP4A3-204ENST00000521578 RIMS2Q9UQ26 1411 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms