RNA–Protein interactions for RNA: ENST00000520278.1

TSPAN18-206, Transcript of tetraspanin 18, humanhuman

TSL 4

Gene TSPAN18, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-206ENST00000520278 DEPDC5O75140 1603 aa17.85■□□□□ 0.45
TSPAN18-206ENST00000520278 MLECQ14165 292 aa17.85■□□□□ 0.45
TSPAN18-206ENST00000520278 RAB3GAP2Q9H2M9 1393 aa17.85■□□□□ 0.45
TSPAN18-206ENST00000520278 GGT6Q6P531 493 aa17.84■□□□□ 0.45
TSPAN18-206ENST00000520278 UNC13BO14795 1591 aa17.83■□□□□ 0.44
TSPAN18-206ENST00000520278 PRDM15P57071 1507 aaPredicted RBP17.82■□□□□ 0.44
TSPAN18-206ENST00000520278 VWDEQ8N2E2 1590 aa17.82■□□□□ 0.44
TSPAN18-206ENST00000520278 ADAMTSL3P82987 1691 aa17.8■□□□□ 0.44
TSPAN18-206ENST00000520278 HRCP23327 699 aa17.8■□□□□ 0.44
TSPAN18-206ENST00000520278 KDM5DQ9BY66 1539 aa17.79■□□□□ 0.44
TSPAN18-206ENST00000520278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
TSPAN18-206ENST00000520278 KDM4FA0A1W2PPD8 638 aa17.78■□□□□ 0.44
TSPAN18-206ENST00000520278 ABCC3O15438 1527 aa17.77■□□□□ 0.44
TSPAN18-206ENST00000520278 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
TSPAN18-206ENST00000520278 NUP155O75694 1391 aa17.77■□□□□ 0.43
TSPAN18-206ENST00000520278 MADDQ8WXG6 1647 aa17.76■□□□□ 0.43
TSPAN18-206ENST00000520278 PZPP20742 1482 aa17.75■□□□□ 0.43
TSPAN18-206ENST00000520278 LMTK2Q8IWU2 1503 aa17.75■□□□□ 0.43
TSPAN18-206ENST00000520278 WASHC2CQ9Y4E1 1318 aa17.74■□□□□ 0.43
TSPAN18-206ENST00000520278 FAM135AQ9P2D6 1515 aa17.74■□□□□ 0.43
TSPAN18-206ENST00000520278 IQGAP3Q86VI3 1631 aa17.74■□□□□ 0.43
TSPAN18-206ENST00000520278 KANK1Q14678 1352 aa17.72■□□□□ 0.43
TSPAN18-206ENST00000520278 TRIM52Q96A61 297 aa17.72■□□□□ 0.43
TSPAN18-206ENST00000520278 CEP152O94986 1710 aa17.72■□□□□ 0.43
TSPAN18-206ENST00000520278 CLTCQ00610 1675 aaKnown RBP17.71■□□□□ 0.43
TSPAN18-206ENST00000520278 CNTLNQ9NXG0 1405 aa17.71■□□□□ 0.43
TSPAN18-206ENST00000520278 FER1L4A9Z1Z3 1794 aa17.71■□□□□ 0.43
TSPAN18-206ENST00000520278 ZMYM3Q14202 1370 aa17.7■□□□□ 0.42
TSPAN18-206ENST00000520278 ZC3H13Q5T200 1668 aaKnown RBP17.7■□□□□ 0.42
TSPAN18-206ENST00000520278 RIMS1Q86UR5 1692 aaKnown RBP17.68■□□□□ 0.42
TSPAN18-206ENST00000520278 NPATQ14207 1427 aa17.68■□□□□ 0.42
TSPAN18-206ENST00000520278 ARHGAP31Q2M1Z3 1444 aa17.68■□□□□ 0.42
TSPAN18-206ENST00000520278 MPHOSPH9Q99550 1183 aa17.68■□□□□ 0.42
TSPAN18-206ENST00000520278 CAMSAP1Q5T5Y3 1602 aa17.68■□□□□ 0.42
TSPAN18-206ENST00000520278 ACIN1Q9UKV3 1341 aaKnown RBP17.68■□□□□ 0.42
TSPAN18-206ENST00000520278 MROH2AA6NES4 1674 aa17.67■□□□□ 0.42
TSPAN18-206ENST00000520278 EFCAB6Q5THR3 1501 aa17.67■□□□□ 0.42
TSPAN18-206ENST00000520278 CEBPAP49715 358 aaPredicted RBP17.67■□□□□ 0.42
TSPAN18-206ENST00000520278 PTPRMP28827 1452 aa17.67■□□□□ 0.42
TSPAN18-206ENST00000520278 TET3O43151 1660 aa17.67■□□□□ 0.42
TSPAN18-206ENST00000520278 SLC4A1APQ9BWU0 796 aaKnown RBP17.66■□□□□ 0.42
TSPAN18-206ENST00000520278 ESF1Q9H501 851 aaKnown RBP17.66■□□□□ 0.42
TSPAN18-206ENST00000520278 FBXO31Q5XUX0 539 aaPredicted RBP17.65■□□□□ 0.42
TSPAN18-206ENST00000520278 PKD2Q13563 968 aa17.64■□□□□ 0.41
TSPAN18-206ENST00000520278 E9PCH4 1651 aa17.64■□□□□ 0.41
TSPAN18-206ENST00000520278 C3P01024 1663 aa17.64■□□□□ 0.41
TSPAN18-206ENST00000520278 FOXD1Q16676 465 aa17.63■□□□□ 0.41
TSPAN18-206ENST00000520278 DHX57Q6P158 1386 aaKnown RBP17.61■□□□□ 0.41
TSPAN18-206ENST00000520278 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
TSPAN18-206ENST00000520278 RPRD2Q5VT52 1461 aaKnown RBP17.61■□□□□ 0.41
TSPAN18-206ENST00000520278 NOS1P29475 1434 aa17.6■□□□□ 0.41
TSPAN18-206ENST00000520278 ERVK-7P63135 1459 aa17.6■□□□□ 0.41
TSPAN18-206ENST00000520278 SPATA31D1Q6ZQQ2 1576 aa17.59■□□□□ 0.41
TSPAN18-206ENST00000520278 PTPRTO14522 1441 aa17.59■□□□□ 0.41
TSPAN18-206ENST00000520278 ILDR1Q86SU0 546 aaPredicted RBP17.58■□□□□ 0.4
TSPAN18-206ENST00000520278 PREX1Q8TCU6 1659 aa17.58■□□□□ 0.4
TSPAN18-206ENST00000520278 PLPPR3Q6T4P5 718 aa17.57■□□□□ 0.4
TSPAN18-206ENST00000520278 SYNMO15061 1565 aa17.57■□□□□ 0.4
TSPAN18-206ENST00000520278 ANKRD30BQ9BXX2 1392 aa17.54■□□□□ 0.4
TSPAN18-206ENST00000520278 TNRQ92752 1358 aa17.53■□□□□ 0.4
TSPAN18-206ENST00000520278 CFAP65Q6ZU64 1925 aaKnown RBP17.53■□□□□ 0.4
TSPAN18-206ENST00000520278 UGGT1Q9NYU2 1555 aa17.52■□□□□ 0.39
TSPAN18-206ENST00000520278 TRPM2O94759 1503 aa17.52■□□□□ 0.39
TSPAN18-206ENST00000520278 SPHKAPQ2M3C7 1700 aa17.51■□□□□ 0.39
TSPAN18-206ENST00000520278 IDI1Q13907 227 aa17.5■□□□□ 0.39
TSPAN18-206ENST00000520278 PIK3C2BO00750 1634 aa17.49■□□□□ 0.39
TSPAN18-206ENST00000520278 CLTCL1P53675 1640 aa17.48■□□□□ 0.39
TSPAN18-206ENST00000520278 NLRP1Q9C000 1473 aa17.46■□□□□ 0.39
TSPAN18-206ENST00000520278 SLC52A1Q9NWF4 448 aa17.46■□□□□ 0.39
TSPAN18-206ENST00000520278 MYO3AQ8NEV4 1616 aa17.46■□□□□ 0.39
TSPAN18-206ENST00000520278 SETD1BQ9UPS6 1966 aaKnown RBP17.44■□□□□ 0.38
TSPAN18-206ENST00000520278 A2ML1A8K2U0 1454 aa17.43■□□□□ 0.38
TSPAN18-206ENST00000520278 CCDC144AA2RUR9 1427 aa17.42■□□□□ 0.38
TSPAN18-206ENST00000520278 SIN3AQ96ST3 1273 aa17.42■□□□□ 0.38
TSPAN18-206ENST00000520278 CEP170BQ9Y4F5 1589 aaPredicted RBP17.41■□□□□ 0.38
TSPAN18-206ENST00000520278 UHRF1BP1Q6BDS2 1440 aa17.41■□□□□ 0.38
TSPAN18-206ENST00000520278 LMTK3Q96Q04 1460 aa17.41■□□□□ 0.38
TSPAN18-206ENST00000520278 ZNF142P52746 1687 aaPredicted RBP17.41■□□□□ 0.38
TSPAN18-206ENST00000520278 TMEM131LA2VDJ0 1609 aa17.4■□□□□ 0.38
TSPAN18-206ENST00000520278 SPATA31E1Q6ZUB1 1445 aa17.4■□□□□ 0.38
TSPAN18-206ENST00000520278 ADGRB3O60242 1522 aa17.4■□□□□ 0.38
TSPAN18-206ENST00000520278 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
TSPAN18-206ENST00000520278 CCER1Q8TC90 406 aaPredicted RBP17.38■□□□□ 0.37
TSPAN18-206ENST00000520278 CLSPNQ9HAW4 1339 aa17.37■□□□□ 0.37
TSPAN18-206ENST00000520278 KDM5AP29375 1690 aaKnown RBP17.36■□□□□ 0.37
TSPAN18-206ENST00000520278 CHGAP10645 457 aaKnown RBP17.35■□□□□ 0.37
TSPAN18-206ENST00000520278 NEURL4Q96JN8 1562 aa17.35■□□□□ 0.37
TSPAN18-206ENST00000520278 ARHGAP23Q9P227 1491 aa17.34■□□□□ 0.37
TSPAN18-206ENST00000520278 MYO5BQ9ULV0 1848 aa17.33■□□□□ 0.37
TSPAN18-206ENST00000520278 ZFYVE9O95405 1425 aa17.33■□□□□ 0.36
TSPAN18-206ENST00000520278 TMEM2Q9UHN6 1383 aa17.33■□□□□ 0.36
TSPAN18-206ENST00000520278 HSPA2P54652 639 aa17.33■□□□□ 0.36
TSPAN18-206ENST00000520278 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
TSPAN18-206ENST00000520278 THEMISQ8N1K5 641 aaPredicted RBP17.33■□□□□ 0.36
TSPAN18-206ENST00000520278 KIF1BO60333 1816 aa17.33■□□□□ 0.36
TSPAN18-206ENST00000520278 SLIT1O75093 1534 aa17.32■□□□□ 0.36
TSPAN18-206ENST00000520278 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
TSPAN18-206ENST00000520278 RGL3Q3MIN7 710 aa17.31■□□□□ 0.36
TSPAN18-206ENST00000520278 LTKP29376 864 aa17.3■□□□□ 0.36
TSPAN18-206ENST00000520278 NEXMIFQ5QGS0 1516 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms