RNA–Protein interactions for RNA: ENST00000520258.1

GPAT4-206, Transcript of glycerol-3-phosphate acyltransferase 4, human

TSL 2

Gene GPAT4, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPAT4-206	ENST00000520258	TRIM26	Q12899	539 aa	Predicted RBP	33.61	■■■□□ 2.97
GPAT4-206	ENST00000520258	PRDM15	P57071	1507 aa	Predicted RBP	33.61	■■■□□ 2.97
GPAT4-206	ENST00000520258	FAM135A	Q9P2D6	1515 aa		33.61	■■■□□ 2.97
GPAT4-206	ENST00000520258	ZC3H13	Q5T200	1668 aa	Known RBP	33.61	■■■□□ 2.97
GPAT4-206	ENST00000520258	KIF3B	O15066	747 aa		33.59	■■■□□ 2.97
GPAT4-206	ENST00000520258	MROH2A	A6NES4	1674 aa		33.57	■■■□□ 2.96
GPAT4-206	ENST00000520258	CLTC	Q00610	1675 aa	Known RBP	33.56	■■■□□ 2.96
GPAT4-206	ENST00000520258	RIMS1	Q86UR5	1692 aa	Known RBP	33.56	■■■□□ 2.96
GPAT4-206	ENST00000520258	CEP152	O94986	1710 aa		33.56	■■■□□ 2.96
GPAT4-206	ENST00000520258	MLEC	Q14165	292 aa		33.52	■■■□□ 2.96
GPAT4-206	ENST00000520258	KDM5D	Q9BY66	1539 aa		33.52	■■■□□ 2.96
GPAT4-206	ENST00000520258	VWDE	Q8N2E2	1590 aa		33.51	■■■□□ 2.96
GPAT4-206	ENST00000520258	GGT6	Q6P531	493 aa		33.49	■■■□□ 2.95
GPAT4-206	ENST00000520258	PPP6R1	Q9UPN7	881 aa		33.49	■■■□□ 2.95
GPAT4-206	ENST00000520258	SETD5	Q9C0A6	1442 aa		33.48	■■■□□ 2.95
GPAT4-206	ENST00000520258	IQGAP3	Q86VI3	1631 aa		33.48	■■■□□ 2.95
GPAT4-206	ENST00000520258	CNTLN	Q9NXG0	1405 aa		33.45	■■■□□ 2.95
GPAT4-206	ENST00000520258	ABCC3	O15438	1527 aa		33.45	■■■□□ 2.95
GPAT4-206	ENST00000520258	CAMSAP1	Q5T5Y3	1602 aa		33.45	■■■□□ 2.95
GPAT4-206	ENST00000520258	C3	P01024	1663 aa		33.44	■■■□□ 2.94
GPAT4-206	ENST00000520258	KDM4F	A0A1W2PPD8	638 aa		33.41	■■■□□ 2.94
GPAT4-206	ENST00000520258	KANK1	Q14678	1352 aa		33.41	■■■□□ 2.94
GPAT4-206	ENST00000520258	LMTK2	Q8IWU2	1503 aa		33.41	■■■□□ 2.94
GPAT4-206	ENST00000520258	TET3	O43151	1660 aa		33.41	■■■□□ 2.94
GPAT4-206	ENST00000520258	RAB3GAP2	Q9H2M9	1393 aa		33.36	■■■□□ 2.93
GPAT4-206	ENST00000520258	ESF1	Q9H501	851 aa	Known RBP	33.36	■■■□□ 2.93
GPAT4-206	ENST00000520258	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.35	■■■□□ 2.93
GPAT4-206	ENST00000520258	WASHC2C	Q9Y4E1	1318 aa		33.34	■■■□□ 2.93
GPAT4-206	ENST00000520258	PTPRM	P28827	1452 aa		33.34	■■■□□ 2.93
GPAT4-206	ENST00000520258	EFCAB6	Q5THR3	1501 aa		33.33	■■■□□ 2.93
GPAT4-206	ENST00000520258	ACIN1	Q9UKV3	1341 aa	Known RBP	33.33	■■■□□ 2.93
GPAT4-206	ENST00000520258	NUP155	O75694	1391 aa		33.3	■■■□□ 2.92
GPAT4-206	ENST00000520258	CFAP65	Q6ZU64	1925 aa	Known RBP	33.3	■■■□□ 2.92
GPAT4-206	ENST00000520258		E9PCH4	1651 aa		33.29	■■■□□ 2.92
GPAT4-206	ENST00000520258	HRC	P23327	699 aa		33.27	■■■□□ 2.92
GPAT4-206	ENST00000520258	PZP	P20742	1482 aa		33.26	■■■□□ 2.92
GPAT4-206	ENST00000520258	ZMYM3	Q14202	1370 aa		33.26	■■■□□ 2.92
GPAT4-206	ENST00000520258	ARHGAP31	Q2M1Z3	1444 aa		33.26	■■■□□ 2.91
GPAT4-206	ENST00000520258	PREX1	Q8TCU6	1659 aa		33.26	■■■□□ 2.91
GPAT4-206	ENST00000520258	RPRD2	Q5VT52	1461 aa	Known RBP	33.21	■■■□□ 2.91
GPAT4-206	ENST00000520258	SETD1B	Q9UPS6	1966 aa	Known RBP	33.2	■■■□□ 2.91
GPAT4-206	ENST00000520258	TRIM52	Q96A61	297 aa		33.2	■■■□□ 2.91
GPAT4-206	ENST00000520258	NPAT	Q14207	1427 aa		33.18	■■■□□ 2.9
GPAT4-206	ENST00000520258	SPATA31D1	Q6ZQQ2	1576 aa		33.17	■■■□□ 2.9
GPAT4-206	ENST00000520258	SPHKAP	Q2M3C7	1700 aa		33.16	■■■□□ 2.9
GPAT4-206	ENST00000520258	PCGF6	Q9BYE7	350 aa		33.15	■■■□□ 2.9
GPAT4-206	ENST00000520258	ERVK-7	P63135	1459 aa		33.12	■■■□□ 2.89
GPAT4-206	ENST00000520258	CEBPA	P49715	358 aa	Predicted RBP	33.12	■■■□□ 2.89
GPAT4-206	ENST00000520258	MYO3A	Q8NEV4	1616 aa		33.1	■■■□□ 2.89
GPAT4-206	ENST00000520258	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.07	■■■□□ 2.88
GPAT4-206	ENST00000520258	SYNM	O15061	1565 aa		33.07	■■■□□ 2.88
GPAT4-206	ENST00000520258	ZNF142	P52746	1687 aa	Predicted RBP	33.06	■■■□□ 2.88
GPAT4-206	ENST00000520258	NOS1	P29475	1434 aa		33.05	■■■□□ 2.88
GPAT4-206	ENST00000520258	PLPPR3	Q6T4P5	718 aa		33.04	■■■□□ 2.88
GPAT4-206	ENST00000520258	MPHOSPH9	Q99550	1183 aa		33.04	■■■□□ 2.88
GPAT4-206	ENST00000520258	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.02	■■■□□ 2.88
GPAT4-206	ENST00000520258	PIK3C2B	O00750	1634 aa		33.02	■■■□□ 2.88
GPAT4-206	ENST00000520258	TNR	Q92752	1358 aa		33.01	■■■□□ 2.88
GPAT4-206	ENST00000520258	PKD2	Q13563	968 aa		33	■■■□□ 2.87
GPAT4-206	ENST00000520258	TRPM2	O94759	1503 aa		32.98	■■■□□ 2.87
GPAT4-206	ENST00000520258	PTPRT	O14522	1441 aa		32.98	■■■□□ 2.87
GPAT4-206	ENST00000520258	NLRP1	Q9C000	1473 aa		32.96	■■■□□ 2.87
GPAT4-206	ENST00000520258	KDM5A	P29375	1690 aa	Known RBP	32.96	■■■□□ 2.87
GPAT4-206	ENST00000520258	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.95	■■■□□ 2.86
GPAT4-206	ENST00000520258	UHRF1BP1	Q6BDS2	1440 aa		32.92	■■■□□ 2.86
GPAT4-206	ENST00000520258	CLTCL1	P53675	1640 aa		32.91	■■■□□ 2.86
GPAT4-206	ENST00000520258	UBR1	Q8IWV7	1749 aa		32.91	■■■□□ 2.86
GPAT4-206	ENST00000520258	KIF1B	O60333	1816 aa		32.91	■■■□□ 2.86
GPAT4-206	ENST00000520258	MYO5B	Q9ULV0	1848 aa		32.91	■■■□□ 2.86
GPAT4-206	ENST00000520258	A2ML1	A8K2U0	1454 aa		32.89	■■■□□ 2.86
GPAT4-206	ENST00000520258	PLA2R1	Q13018	1463 aa		32.89	■■■□□ 2.86
GPAT4-206	ENST00000520258	UGGT1	Q9NYU2	1555 aa		32.88	■■■□□ 2.85
GPAT4-206	ENST00000520258	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.86	■■■□□ 2.85
GPAT4-206	ENST00000520258	LMTK3	Q96Q04	1460 aa		32.86	■■■□□ 2.85
GPAT4-206	ENST00000520258	FOXD1	Q16676	465 aa		32.85	■■■□□ 2.85
GPAT4-206	ENST00000520258	DHX57	Q6P158	1386 aa	Known RBP	32.84	■■■□□ 2.85
GPAT4-206	ENST00000520258	ADGRB3	O60242	1522 aa		32.84	■■■□□ 2.85
GPAT4-206	ENST00000520258	SLC52A1	Q9NWF4	448 aa		32.84	■■■□□ 2.85
GPAT4-206	ENST00000520258	TMEM131L	A2VDJ0	1609 aa		32.83	■■■□□ 2.85
GPAT4-206	ENST00000520258	ANKRD30B	Q9BXX2	1392 aa		32.78	■■■□□ 2.84
GPAT4-206	ENST00000520258	IDI1	Q13907	227 aa		32.76	■■■□□ 2.83
GPAT4-206	ENST00000520258	CCDC144A	A2RUR9	1427 aa		32.76	■■■□□ 2.83
GPAT4-206	ENST00000520258	POLR1A	O95602	1720 aa	Predicted RBP	32.72	■■■□□ 2.83
GPAT4-206	ENST00000520258	NEURL4	Q96JN8	1562 aa		32.72	■■■□□ 2.83
GPAT4-206	ENST00000520258	SLIT1	O75093	1534 aa		32.67	■■■□□ 2.82
GPAT4-206	ENST00000520258	IFT172	Q9UG01	1749 aa		32.65	■■■□□ 2.82
GPAT4-206	ENST00000520258	STRC	Q7RTU9	1775 aa		32.63	■■■□□ 2.81
GPAT4-206	ENST00000520258	ARHGAP23	Q9P227	1491 aa		32.63	■■■□□ 2.81
GPAT4-206	ENST00000520258	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.63	■■■□□ 2.81
GPAT4-206	ENST00000520258	STAG3	Q9UJ98	1225 aa		32.63	■■■□□ 2.81
GPAT4-206	ENST00000520258	PPL	O60437	1756 aa		32.63	■■■□□ 2.81
GPAT4-206	ENST00000520258	SPATA31E1	Q6ZUB1	1445 aa		32.6	■■■□□ 2.81
GPAT4-206	ENST00000520258	CHGA	P10645	457 aa	Known RBP	32.57	■■■□□ 2.8
GPAT4-206	ENST00000520258	TMEM2	Q9UHN6	1383 aa		32.57	■■■□□ 2.8
GPAT4-206	ENST00000520258	NEXMIF	Q5QGS0	1516 aa		32.56	■■■□□ 2.8
GPAT4-206	ENST00000520258	HSPA2	P54652	639 aa		32.56	■■■□□ 2.8
GPAT4-206	ENST00000520258	ZFYVE9	O95405	1425 aa		32.54	■■■□□ 2.8
GPAT4-206	ENST00000520258	RIMS2	Q9UQ26	1411 aa		32.51	■■■□□ 2.79
GPAT4-206	ENST00000520258	CLSPN	Q9HAW4	1339 aa		32.51	■■■□□ 2.79
GPAT4-206	ENST00000520258	SCAF11	Q99590	1463 aa	Known RBP	32.49	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms