RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 RNF17Q9BXT8 1623 aaKnown RBP26.51■■□□□ 1.83
SDC2-205ENST00000520233 DEPDC5O75140 1603 aa26.5■■□□□ 1.83
SDC2-205ENST00000520233 GGT6Q6P531 493 aa26.49■■□□□ 1.83
SDC2-205ENST00000520233 UNC13BO14795 1591 aa26.49■■□□□ 1.83
SDC2-205ENST00000520233 MROH1Q8NDA8 1641 aa26.47■■□□□ 1.83
SDC2-205ENST00000520233 PRDM15P57071 1507 aaPredicted RBP26.46■■□□□ 1.83
SDC2-205ENST00000520233 TRIM52Q96A61 297 aa26.45■■□□□ 1.82
SDC2-205ENST00000520233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.45■■□□□ 1.821e-13■□□□□ 9.2
SDC2-205ENST00000520233 PPP6R1Q9UPN7 881 aa26.45■■□□□ 1.82
SDC2-205ENST00000520233 MLECQ14165 292 aa26.44■■□□□ 1.82
SDC2-205ENST00000520233 NUP155O75694 1391 aa26.44■■□□□ 1.82
SDC2-205ENST00000520233 KANK1Q14678 1352 aa26.44■■□□□ 1.82
SDC2-205ENST00000520233 KDM5DQ9BY66 1539 aa26.42■■□□□ 1.82
SDC2-205ENST00000520233 VWDEQ8N2E2 1590 aa26.41■■□□□ 1.82
SDC2-205ENST00000520233 FAM135AQ9P2D6 1515 aa26.39■■□□□ 1.82
SDC2-205ENST00000520233 IQGAP3Q86VI3 1631 aa26.38■■□□□ 1.81
SDC2-205ENST00000520233 WASHC2CQ9Y4E1 1318 aa26.38■■□□□ 1.81
SDC2-205ENST00000520233 LMTK2Q8IWU2 1503 aa26.35■■□□□ 1.81
SDC2-205ENST00000520233 PZPP20742 1482 aa26.35■■□□□ 1.81
SDC2-205ENST00000520233 ABCC3O15438 1527 aa26.34■■□□□ 1.81
SDC2-205ENST00000520233 ZC3H13Q5T200 1668 aaKnown RBP26.34■■□□□ 1.81
SDC2-205ENST00000520233 ESF1Q9H501 851 aaKnown RBP26.33■■□□□ 1.81
SDC2-205ENST00000520233 ADAMTSL3P82987 1691 aa26.31■■□□□ 1.8
SDC2-205ENST00000520233 CNTLNQ9NXG0 1405 aa26.31■■□□□ 1.8
SDC2-205ENST00000520233 MPHOSPH9Q99550 1183 aa26.31■■□□□ 1.8
SDC2-205ENST00000520233 SLC4A1APQ9BWU0 796 aaKnown RBP26.31■■□□□ 1.8
SDC2-205ENST00000520233 CEP152O94986 1710 aa26.3■■□□□ 1.8
SDC2-205ENST00000520233 TET3O43151 1660 aa26.28■■□□□ 1.8
SDC2-205ENST00000520233 CLTCQ00610 1675 aaKnown RBP26.28■■□□□ 1.8
SDC2-205ENST00000520233 FER1L4A9Z1Z3 1794 aa26.27■■□□□ 1.8
SDC2-205ENST00000520233 CAMSAP1Q5T5Y3 1602 aa26.25■■□□□ 1.79
SDC2-205ENST00000520233 MADDQ8WXG6 1647 aa26.25■■□□□ 1.79
SDC2-205ENST00000520233 EFCAB6Q5THR3 1501 aa26.24■■□□□ 1.79
SDC2-205ENST00000520233 ARHGAP31Q2M1Z3 1444 aa26.24■■□□□ 1.79
SDC2-205ENST00000520233 PKD2Q13563 968 aa26.24■■□□□ 1.79
SDC2-205ENST00000520233 ZMYM3Q14202 1370 aa26.23■■□□□ 1.79
SDC2-205ENST00000520233 DHX57Q6P158 1386 aaKnown RBP26.23■■□□□ 1.79
SDC2-205ENST00000520233 MROH2AA6NES4 1674 aa26.23■■□□□ 1.79
SDC2-205ENST00000520233 RPRD2Q5VT52 1461 aaKnown RBP26.2■■□□□ 1.78
SDC2-205ENST00000520233 AEBP2Q6ZN18 517 aaPredicted RBP26.2■■□□□ 1.78
SDC2-205ENST00000520233 NPATQ14207 1427 aa26.2■■□□□ 1.78
SDC2-205ENST00000520233 E9PCH4 1651 aa26.19■■□□□ 1.78
SDC2-205ENST00000520233 RIMS1Q86UR5 1692 aaKnown RBP26.19■■□□□ 1.78
SDC2-205ENST00000520233 KDM4FA0A1W2PPD8 638 aa26.16■■□□□ 1.78
SDC2-205ENST00000520233 FOXD1Q16676 465 aa26.15■■□□□ 1.78
SDC2-205ENST00000520233 C3P01024 1663 aa26.12■■□□□ 1.77
SDC2-205ENST00000520233 PTPRMP28827 1452 aa26.11■■□□□ 1.77
SDC2-205ENST00000520233 CEBPAP49715 358 aaPredicted RBP26.11■■□□□ 1.77
SDC2-205ENST00000520233 PTPRTO14522 1441 aa26.11■■□□□ 1.77
SDC2-205ENST00000520233 FBXO31Q5XUX0 539 aaPredicted RBP26.1■■□□□ 1.77
SDC2-205ENST00000520233 NOS1P29475 1434 aa26.1■■□□□ 1.77
SDC2-205ENST00000520233 ERVK-7P63135 1459 aa26.1■■□□□ 1.77
SDC2-205ENST00000520233 PREX1Q8TCU6 1659 aa26.08■■□□□ 1.77
SDC2-205ENST00000520233 ANKRD30BQ9BXX2 1392 aa26.07■■□□□ 1.76
SDC2-205ENST00000520233 SPATA31D1Q6ZQQ2 1576 aa26.07■■□□□ 1.76
SDC2-205ENST00000520233 PLA2R1Q13018 1463 aa26.06■■□□□ 1.76
SDC2-205ENST00000520233 CCER1Q8TC90 406 aaPredicted RBP26.06■■□□□ 1.76
SDC2-205ENST00000520233 SPHKAPQ2M3C7 1700 aa26.05■■□□□ 1.76
SDC2-205ENST00000520233 TRPM2O94759 1503 aa26.04■■□□□ 1.76
SDC2-205ENST00000520233 PLPPR3Q6T4P5 718 aa26.04■■□□□ 1.76
SDC2-205ENST00000520233 CLSPNQ9HAW4 1339 aa26.03■■□□□ 1.76
SDC2-205ENST00000520233 TNRQ92752 1358 aa26.02■■□□□ 1.76
SDC2-205ENST00000520233 CFAP65Q6ZU64 1925 aaKnown RBP26.02■■□□□ 1.76
SDC2-205ENST00000520233 SYNMO15061 1565 aa26.01■■□□□ 1.75
SDC2-205ENST00000520233 SLC52A1Q9NWF4 448 aa25.99■■□□□ 1.75
SDC2-205ENST00000520233 CCDC144AA2RUR9 1427 aa25.97■■□□□ 1.75
SDC2-205ENST00000520233 PIK3C2BO00750 1634 aa25.95■■□□□ 1.74
SDC2-205ENST00000520233 IDI1Q13907 227 aa25.94■■□□□ 1.74
SDC2-205ENST00000520233 CLTCL1P53675 1640 aa25.94■■□□□ 1.74
SDC2-205ENST00000520233 UGGT1Q9NYU2 1555 aa25.94■■□□□ 1.74
SDC2-205ENST00000520233 NLRP1Q9C000 1473 aa25.92■■□□□ 1.74
SDC2-205ENST00000520233 SIN3AQ96ST3 1273 aa25.91■■□□□ 1.74
SDC2-205ENST00000520233 MYO3AQ8NEV4 1616 aa25.88■■□□□ 1.73
SDC2-205ENST00000520233 SETD1BQ9UPS6 1966 aaKnown RBP25.87■■□□□ 1.73
SDC2-205ENST00000520233 NEUROD1Q13562 356 aa25.86■■□□□ 1.73
SDC2-205ENST00000520233 A2ML1A8K2U0 1454 aa25.85■■□□□ 1.73
SDC2-205ENST00000520233 UHRF1BP1Q6BDS2 1440 aa25.84■■□□□ 1.73
SDC2-205ENST00000520233 NEURL4Q96JN8 1562 aa25.83■■□□□ 1.73
SDC2-205ENST00000520233 CHGAP10645 457 aaKnown RBP25.83■■□□□ 1.73
SDC2-205ENST00000520233 KIF1BO60333 1816 aa25.83■■□□□ 1.73
SDC2-205ENST00000520233 SPATA31E1Q6ZUB1 1445 aa25.82■■□□□ 1.72
SDC2-205ENST00000520233 STAG3Q9UJ98 1225 aa25.82■■□□□ 1.72
SDC2-205ENST00000520233 ADGRB3O60242 1522 aa25.82■■□□□ 1.72
SDC2-205ENST00000520233 TMEM131LA2VDJ0 1609 aa25.81■■□□□ 1.72
SDC2-205ENST00000520233 CEP170BQ9Y4F5 1589 aaPredicted RBP25.81■■□□□ 1.72
SDC2-205ENST00000520233 KDM5AP29375 1690 aaKnown RBP25.8■■□□□ 1.72
SDC2-205ENST00000520233 ZNF142P52746 1687 aaPredicted RBP25.8■■□□□ 1.72
SDC2-205ENST00000520233 UBR1Q8IWV7 1749 aa25.77■■□□□ 1.72
SDC2-205ENST00000520233 RGL3Q3MIN7 710 aa25.76■■□□□ 1.71
SDC2-205ENST00000520233 THEMISQ8N1K5 641 aaPredicted RBP25.75■■□□□ 1.71
SDC2-205ENST00000520233 ZNF326Q5BKZ1 582 aaKnown RBP25.74■■□□□ 1.71
SDC2-205ENST00000520233 TIMELESSQ9UNS1 1208 aa25.74■■□□□ 1.71
SDC2-205ENST00000520233 TONSLQ96HA7 1378 aa25.73■■□□□ 1.71
SDC2-205ENST00000520233 RPGRIP1LQ68CZ1 1315 aa25.73■■□□□ 1.71
SDC2-205ENST00000520233 MYO5BQ9ULV0 1848 aa25.71■■□□□ 1.71
SDC2-205ENST00000520233 L3MBTL2Q969R5 705 aa25.7■■□□□ 1.7
SDC2-205ENST00000520233 TMEM2Q9UHN6 1383 aa25.69■■□□□ 1.7
SDC2-205ENST00000520233 LMTK3Q96Q04 1460 aa25.69■■□□□ 1.7
SDC2-205ENST00000520233 SLIT1O75093 1534 aa25.68■■□□□ 1.7
SDC2-205ENST00000520233 ARHGAP23Q9P227 1491 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms