RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 TRIM52Q96A61 297 aa21.22■□□□□ 0.99
VPS37A-206ENST00000520140 BCORL1Q5H9F3 1711 aa21.19■□□□□ 0.98
VPS37A-206ENST00000520140 MROH1Q8NDA8 1641 aa21.18■□□□□ 0.98
VPS37A-206ENST00000520140 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
VPS37A-206ENST00000520140 DEPDC5O75140 1603 aa21.17■□□□□ 0.98
VPS37A-206ENST00000520140 NUP155O75694 1391 aa21.17■□□□□ 0.98
VPS37A-206ENST00000520140 UNC13BO14795 1591 aa21.15■□□□□ 0.98
VPS37A-206ENST00000520140 WASHC2CQ9Y4E1 1318 aa21.15■□□□□ 0.98
VPS37A-206ENST00000520140 CEP152O94986 1710 aa21.14■□□□□ 0.97
VPS37A-206ENST00000520140 PRDM15P57071 1507 aaPredicted RBP21.14■□□□□ 0.97
VPS37A-206ENST00000520140 ESF1Q9H501 851 aaKnown RBP21.13■□□□□ 0.97
VPS37A-206ENST00000520140 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
VPS37A-206ENST00000520140 KANK1Q14678 1352 aa21.12■□□□□ 0.97
VPS37A-206ENST00000520140 CLTCQ00610 1675 aaKnown RBP21.12■□□□□ 0.97
VPS37A-206ENST00000520140 FER1L4A9Z1Z3 1794 aa21.12■□□□□ 0.97
VPS37A-206ENST00000520140 MADDQ8WXG6 1647 aa21.1■□□□□ 0.97
VPS37A-206ENST00000520140 FAM135AQ9P2D6 1515 aa21.09■□□□□ 0.97
VPS37A-206ENST00000520140 ABCC3O15438 1527 aa21.08■□□□□ 0.96
VPS37A-206ENST00000520140 KDM5DQ9BY66 1539 aa21.08■□□□□ 0.96
VPS37A-206ENST00000520140 CFAP65Q6ZU64 1925 aaKnown RBP21.08■□□□□ 0.96
VPS37A-206ENST00000520140 SLC4A1APQ9BWU0 796 aaKnown RBP21.08■□□□□ 0.96
VPS37A-206ENST00000520140 ADAMTSL3P82987 1691 aa21.08■□□□□ 0.96
VPS37A-206ENST00000520140 IQGAP3Q86VI3 1631 aa21.08■□□□□ 0.96
VPS37A-206ENST00000520140 RIMS1Q86UR5 1692 aaKnown RBP21.07■□□□□ 0.96
VPS37A-206ENST00000520140 VWDEQ8N2E2 1590 aa21.07■□□□□ 0.96
VPS37A-206ENST00000520140 HRCP23327 699 aa21.06■□□□□ 0.96
VPS37A-206ENST00000520140 PZPP20742 1482 aa21.06■□□□□ 0.96
VPS37A-206ENST00000520140 FOXD1Q16676 465 aa21.05■□□□□ 0.96
VPS37A-206ENST00000520140 MPHOSPH9Q99550 1183 aa21.05■□□□□ 0.96
VPS37A-206ENST00000520140 CEBPAP49715 358 aaPredicted RBP21.04■□□□□ 0.96
VPS37A-206ENST00000520140 ZC3H13Q5T200 1668 aaKnown RBP21.04■□□□□ 0.96
VPS37A-206ENST00000520140 CAMSAP1Q5T5Y3 1602 aa21.04■□□□□ 0.96
VPS37A-206ENST00000520140 KDM4FA0A1W2PPD8 638 aa21.04■□□□□ 0.96
VPS37A-206ENST00000520140 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
VPS37A-206ENST00000520140 PKD2Q13563 968 aa21.02■□□□□ 0.96
VPS37A-206ENST00000520140 TET3O43151 1660 aa21.01■□□□□ 0.95
VPS37A-206ENST00000520140 ZMYM3Q14202 1370 aa21.01■□□□□ 0.95
VPS37A-206ENST00000520140 E9PCH4 1651 aa21■□□□□ 0.95
VPS37A-206ENST00000520140 EFCAB6Q5THR3 1501 aa20.99■□□□□ 0.95
VPS37A-206ENST00000520140 LMTK2Q8IWU2 1503 aa20.99■□□□□ 0.95
VPS37A-206ENST00000520140 CNTLNQ9NXG0 1405 aa20.99■□□□□ 0.95
VPS37A-206ENST00000520140 FBXO31Q5XUX0 539 aaPredicted RBP20.98■□□□□ 0.95
VPS37A-206ENST00000520140 C3P01024 1663 aa20.98■□□□□ 0.95
VPS37A-206ENST00000520140 NPATQ14207 1427 aa20.97■□□□□ 0.95
VPS37A-206ENST00000520140 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
VPS37A-206ENST00000520140 MROH2AA6NES4 1674 aa20.97■□□□□ 0.95
VPS37A-206ENST00000520140 DHX57Q6P158 1386 aaKnown RBP20.95■□□□□ 0.94
VPS37A-206ENST00000520140 PTPRMP28827 1452 aa20.94■□□□□ 0.94
VPS37A-206ENST00000520140 PREX1Q8TCU6 1659 aa20.91■□□□□ 0.94
VPS37A-206ENST00000520140 ARHGAP31Q2M1Z3 1444 aa20.9■□□□□ 0.94
VPS37A-206ENST00000520140 RPRD2Q5VT52 1461 aaKnown RBP20.88■□□□□ 0.93
VPS37A-206ENST00000520140 SPHKAPQ2M3C7 1700 aa20.88■□□□□ 0.93
VPS37A-206ENST00000520140 CCER1Q8TC90 406 aaPredicted RBP20.87■□□□□ 0.93
VPS37A-206ENST00000520140 ERVK-7P63135 1459 aa20.87■□□□□ 0.93
VPS37A-206ENST00000520140 UGGT1Q9NYU2 1555 aa20.86■□□□□ 0.93
VPS37A-206ENST00000520140 PLA2R1Q13018 1463 aa20.84■□□□□ 0.93
VPS37A-206ENST00000520140 SYNMO15061 1565 aa20.84■□□□□ 0.93
VPS37A-206ENST00000520140 SPATA31D1Q6ZQQ2 1576 aa20.84■□□□□ 0.93
VPS37A-206ENST00000520140 NOS1P29475 1434 aa20.83■□□□□ 0.93
VPS37A-206ENST00000520140 TNRQ92752 1358 aa20.82■□□□□ 0.92
VPS37A-206ENST00000520140 ANKRD30BQ9BXX2 1392 aa20.81■□□□□ 0.92
VPS37A-206ENST00000520140 PTPRTO14522 1441 aa20.81■□□□□ 0.92
VPS37A-206ENST00000520140 TRPM2O94759 1503 aa20.8■□□□□ 0.92
VPS37A-206ENST00000520140 SIN3AQ96ST3 1273 aa20.8■□□□□ 0.92
VPS37A-206ENST00000520140 IDI1Q13907 227 aa20.79■□□□□ 0.92
VPS37A-206ENST00000520140 CLTCL1P53675 1640 aa20.79■□□□□ 0.92
VPS37A-206ENST00000520140 CHGAP10645 457 aaKnown RBP20.78■□□□□ 0.92
VPS37A-206ENST00000520140 NEUROD1Q13562 356 aa20.78■□□□□ 0.92
VPS37A-206ENST00000520140 CCDC144AA2RUR9 1427 aa20.78■□□□□ 0.92
VPS37A-206ENST00000520140 MYO3AQ8NEV4 1616 aa20.77■□□□□ 0.91
VPS37A-206ENST00000520140 SETD1BQ9UPS6 1966 aaKnown RBP20.77■□□□□ 0.91
VPS37A-206ENST00000520140 PIK3C2BO00750 1634 aa20.75■□□□□ 0.91
VPS37A-206ENST00000520140 SLC52A1Q9NWF4 448 aa20.74■□□□□ 0.91
VPS37A-206ENST00000520140 STAG3Q9UJ98 1225 aa20.74■□□□□ 0.91
VPS37A-206ENST00000520140 MYO5BQ9ULV0 1848 aa20.73■□□□□ 0.91
VPS37A-206ENST00000520140 RGL3Q3MIN7 710 aa20.72■□□□□ 0.91
VPS37A-206ENST00000520140 KIF1BO60333 1816 aa20.72■□□□□ 0.91
VPS37A-206ENST00000520140 UHRF1BP1Q6BDS2 1440 aa20.7■□□□□ 0.9
VPS37A-206ENST00000520140 NLRP1Q9C000 1473 aa20.7■□□□□ 0.9
VPS37A-206ENST00000520140 CEP170BQ9Y4F5 1589 aaPredicted RBP20.69■□□□□ 0.9
VPS37A-206ENST00000520140 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
VPS37A-206ENST00000520140 UBR1Q8IWV7 1749 aa20.68■□□□□ 0.9
VPS37A-206ENST00000520140 AEBP2Q6ZN18 517 aaPredicted RBP20.67■□□□□ 0.9
VPS37A-206ENST00000520140 TMEM131LA2VDJ0 1609 aa20.67■□□□□ 0.9
VPS37A-206ENST00000520140 A2ML1A8K2U0 1454 aa20.66■□□□□ 0.9
VPS37A-206ENST00000520140 ADGRB3O60242 1522 aa20.65■□□□□ 0.9
VPS37A-206ENST00000520140 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
VPS37A-206ENST00000520140 ZNF142P52746 1687 aaPredicted RBP20.65■□□□□ 0.9
VPS37A-206ENST00000520140 HSPA2P54652 639 aa20.65■□□□□ 0.9
VPS37A-206ENST00000520140 NUTM2DQ5VT03 806 aaPredicted RBP20.65■□□□□ 0.9
VPS37A-206ENST00000520140 CLSPNQ9HAW4 1339 aa20.63■□□□□ 0.89
VPS37A-206ENST00000520140 LMTK3Q96Q04 1460 aa20.62■□□□□ 0.89
VPS37A-206ENST00000520140 SPATA31E1Q6ZUB1 1445 aa20.62■□□□□ 0.89
VPS37A-206ENST00000520140 THEMISQ8N1K5 641 aaPredicted RBP20.6■□□□□ 0.89
VPS37A-206ENST00000520140 KDM2AQ9Y2K7 1162 aa20.59■□□□□ 0.89
VPS37A-206ENST00000520140 KDM5AP29375 1690 aaKnown RBP20.58■□□□□ 0.89
VPS37A-206ENST00000520140 TONSLQ96HA7 1378 aa20.57■□□□□ 0.88
VPS37A-206ENST00000520140 DCAF11Q8TEB1 546 aa20.57■□□□□ 0.88
VPS37A-206ENST00000520140 L3MBTL2Q969R5 705 aa20.57■□□□□ 0.88
VPS37A-206ENST00000520140 TMEM2Q9UHN6 1383 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms