RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 SUPT6HQ7KZ85 1726 aaKnown RBP14.14□□□□□ -0.15
PABPC1-213ENST00000519848 ATP7AQ04656 1500 aa14.14□□□□□ -0.15
PABPC1-213ENST00000519848 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
PABPC1-213ENST00000519848 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
PABPC1-213ENST00000519848 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
PABPC1-213ENST00000519848 ADGBQ8N7X0 1667 aa14.13□□□□□ -0.15
PABPC1-213ENST00000519848 ZNF644Q9H582 1327 aaPredicted RBP14.13□□□□□ -0.15
PABPC1-213ENST00000519848 MBD5Q9P267 1494 aa14.12□□□□□ -0.15
PABPC1-213ENST00000519848 LOC105371045A0A1W2PR82 267 aa14.09□□□□□ -0.15
PABPC1-213ENST00000519848 HNRNPMP52272 730 aaKnown RBP eCLIP14.09□□□□□ -0.15
PABPC1-213ENST00000519848 CLTCQ00610 1675 aaKnown RBP14.08□□□□□ -0.16
PABPC1-213ENST00000519848 ZNF777Q9ULD5 760 aaPredicted RBP14.08□□□□□ -0.16
PABPC1-213ENST00000519848 MROH2AA6NES4 1674 aa14.07□□□□□ -0.16
PABPC1-213ENST00000519848 NCOA2Q15596 1464 aa14.07□□□□□ -0.16
PABPC1-213ENST00000519848 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
PABPC1-213ENST00000519848 MTUS2Q5JR59 1369 aa14.07□□□□□ -0.16
PABPC1-213ENST00000519848 KIAA1107Q9UPP5 1409 aa14.07□□□□□ -0.16
PABPC1-213ENST00000519848 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
PABPC1-213ENST00000519848 CCNB3Q8WWL7 1395 aa14.06□□□□□ -0.16
PABPC1-213ENST00000519848 CAMSAP2Q08AD1 1489 aa14.06□□□□□ -0.16
PABPC1-213ENST00000519848 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
PABPC1-213ENST00000519848 A2MP01023 1474 aa14.04□□□□□ -0.16
PABPC1-213ENST00000519848 MYO3AQ8NEV4 1616 aa14.04□□□□□ -0.16
PABPC1-213ENST00000519848 VPS8Q8N3P4 1428 aa14.03□□□□□ -0.16
PABPC1-213ENST00000519848 ZNF142P52746 1687 aaPredicted RBP14.01□□□□□ -0.17
PABPC1-213ENST00000519848 PLEKHH2Q8IVE3 1493 aa14.01□□□□□ -0.17
PABPC1-213ENST00000519848 CFDP1Q9UEE9 299 aaPredicted RBP14.01□□□□□ -0.17
PABPC1-213ENST00000519848 LRRC9Q6ZRR7 1453 aa14□□□□□ -0.17
PABPC1-213ENST00000519848 SPAG9O60271 1321 aaKnown RBP14□□□□□ -0.17
PABPC1-213ENST00000519848 UHRF1BP1Q6BDS2 1440 aa13.99□□□□□ -0.17
PABPC1-213ENST00000519848 MYT1LQ9UL68 1186 aa13.99□□□□□ -0.17
PABPC1-213ENST00000519848 KANK4Q5T7N3 995 aaPredicted RBP13.98□□□□□ -0.17
PABPC1-213ENST00000519848 PTPRKQ15262 1439 aa13.98□□□□□ -0.17
PABPC1-213ENST00000519848 MROH1Q8NDA8 1641 aa13.97□□□□□ -0.17
PABPC1-213ENST00000519848 ARHGEF5Q12774 1597 aa13.97□□□□□ -0.17
PABPC1-213ENST00000519848 CCDC141Q6ZP82 1450 aa13.97□□□□□ -0.17
PABPC1-213ENST00000519848 LTBP4Q8N2S1 1624 aa13.96□□□□□ -0.17
PABPC1-213ENST00000519848 NCOA1Q15788 1441 aa13.96□□□□□ -0.18
PABPC1-213ENST00000519848 SETD1BQ9UPS6 1966 aaKnown RBP13.95□□□□□ -0.18
PABPC1-213ENST00000519848 CAMSAP1Q5T5Y3 1602 aa13.95□□□□□ -0.18
PABPC1-213ENST00000519848 FBXO41Q8TF61 875 aa13.95□□□□□ -0.18
PABPC1-213ENST00000519848 CNTLNQ9NXG0 1405 aa13.95□□□□□ -0.18
PABPC1-213ENST00000519848 CEP170BQ9Y4F5 1589 aaPredicted RBP13.95□□□□□ -0.18
PABPC1-213ENST00000519848 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
PABPC1-213ENST00000519848 ZMYM3Q14202 1370 aa13.94□□□□□ -0.18
PABPC1-213ENST00000519848 MAST1Q9Y2H9 1570 aa13.93□□□□□ -0.18
PABPC1-213ENST00000519848 RTEL1-TNFRSF6BF6WH68 1400 aa13.93□□□□□ -0.18
PABPC1-213ENST00000519848 NPATQ14207 1427 aa13.93□□□□□ -0.18
PABPC1-213ENST00000519848 CROCC2H7BZ55 1655 aa13.93□□□□□ -0.18
PABPC1-213ENST00000519848 MAP3K1Q13233 1512 aa13.92□□□□□ -0.18
PABPC1-213ENST00000519848 ZBTB22O15209 634 aa13.92□□□□□ -0.18
PABPC1-213ENST00000519848 POTEIP0CG38 1075 aa13.92□□□□□ -0.18
PABPC1-213ENST00000519848 RNF17Q9BXT8 1623 aaKnown RBP13.92□□□□□ -0.18
PABPC1-213ENST00000519848 SSUH2Q9Y2M2 353 aa13.91□□□□□ -0.18
PABPC1-213ENST00000519848 NEURL4Q96JN8 1562 aa13.91□□□□□ -0.18
PABPC1-213ENST00000519848 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.19
PABPC1-213ENST00000519848 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.19
PABPC1-213ENST00000519848 DHX29Q7Z478 1369 aaKnown RBP13.89□□□□□ -0.19
PABPC1-213ENST00000519848 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
PABPC1-213ENST00000519848 CEP152O94986 1710 aa13.89□□□□□ -0.19
PABPC1-213ENST00000519848 MYOM3Q5VTT5 1437 aa13.89□□□□□ -0.19
PABPC1-213ENST00000519848 TCOF1Q13428 1488 aaKnown RBP13.88□□□□□ -0.19
PABPC1-213ENST00000519848 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
PABPC1-213ENST00000519848 GGT6Q6P531 493 aa13.88□□□□□ -0.19
PABPC1-213ENST00000519848 CERKQ8TCT0 537 aa13.88□□□□□ -0.19
PABPC1-213ENST00000519848 PTPRTO14522 1441 aa13.88□□□□□ -0.19
PABPC1-213ENST00000519848 ABCC3O15438 1527 aa13.86□□□□□ -0.19
PABPC1-213ENST00000519848 PLSCR2Q9NRY7 297 aa13.86□□□□□ -0.19
PABPC1-213ENST00000519848 PZPP20742 1482 aa13.86□□□□□ -0.19
PABPC1-213ENST00000519848 PTPN23Q9H3S7 1636 aa13.86□□□□□ -0.19
PABPC1-213ENST00000519848 FBXO31Q5XUX0 539 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-213ENST00000519848 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-213ENST00000519848 EIF2AK4Q9P2K8 1649 aaKnown RBP13.85□□□□□ -0.19
PABPC1-213ENST00000519848 NCKAP5LQ9HCH0 1330 aa13.85□□□□□ -0.19
PABPC1-213ENST00000519848 POLR1AO95602 1720 aaPredicted RBP13.84□□□□□ -0.19
PABPC1-213ENST00000519848 PLA2R1Q13018 1463 aa13.84□□□□□ -0.19
PABPC1-213ENST00000519848 A2ML1A8K2U0 1454 aa13.83□□□□□ -0.2
PABPC1-213ENST00000519848 ABCC5O15440 1437 aa13.82□□□□□ -0.2
PABPC1-213ENST00000519848 FAM135AQ9P2D6 1515 aa13.82□□□□□ -0.2
PABPC1-213ENST00000519848 KIF3BO15066 747 aa13.82□□□□□ -0.2
PABPC1-213ENST00000519848 ZC3H13Q5T200 1668 aaKnown RBP13.82□□□□□ -0.2
PABPC1-213ENST00000519848 SPATA31D1Q6ZQQ2 1576 aa13.81□□□□□ -0.2
PABPC1-213ENST00000519848 DEPDC5O75140 1603 aa13.81□□□□□ -0.2
PABPC1-213ENST00000519848 ZNF335Q9H4Z2 1342 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-213ENST00000519848 MIA2Q96PC5 1412 aa13.81□□□□□ -0.2
PABPC1-213ENST00000519848 PRDM15P57071 1507 aaPredicted RBP13.8□□□□□ -0.2
PABPC1-213ENST00000519848 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
PABPC1-213ENST00000519848 ESF1Q9H501 851 aaKnown RBP13.79□□□□□ -0.2
PABPC1-213ENST00000519848 TNRQ92752 1358 aa13.79□□□□□ -0.2
PABPC1-213ENST00000519848 SHANK2Q9UPX8 1470 aa13.79□□□□□ -0.2
PABPC1-213ENST00000519848 FGD6Q6ZV73 1430 aa13.78□□□□□ -0.2
PABPC1-213ENST00000519848 ERVK-7P63135 1459 aa13.78□□□□□ -0.2
PABPC1-213ENST00000519848 ALKQ9UM73 1620 aa13.78□□□□□ -0.2
PABPC1-213ENST00000519848 DAPK1P53355 1430 aa13.77□□□□□ -0.21
PABPC1-213ENST00000519848 VWDEQ8N2E2 1590 aa13.77□□□□□ -0.21
PABPC1-213ENST00000519848 UBR1Q8IWV7 1749 aa13.76□□□□□ -0.21
PABPC1-213ENST00000519848 DUOX2Q9NRD8 1548 aa13.76□□□□□ -0.21
PABPC1-213ENST00000519848 CFAP65Q6ZU64 1925 aaKnown RBP13.75□□□□□ -0.21
PABPC1-213ENST00000519848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.73□□□□□ -0.21
PABPC1-213ENST00000519848 KIF15Q9NS87 1388 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms