RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-205ENST00000519535 SHANK2Q9UPX8 1470 aa21.12■□□□□ 0.97
SCUBE2-205ENST00000519535 MROH1Q8NDA8 1641 aa21.11■□□□□ 0.97
SCUBE2-205ENST00000519535 KIF15Q9NS87 1388 aa21.11■□□□□ 0.97
SCUBE2-205ENST00000519535 DNMT1P26358 1616 aaKnown RBP21.1■□□□□ 0.97
SCUBE2-205ENST00000519535 CROCC2H7BZ55 1655 aa21.09■□□□□ 0.97
SCUBE2-205ENST00000519535 KDM5DQ9BY66 1539 aa21.08■□□□□ 0.96
SCUBE2-205ENST00000519535 STRCQ7RTU9 1775 aa21.08■□□□□ 0.96
SCUBE2-205ENST00000519535 WASHC2CQ9Y4E1 1318 aa21.07■□□□□ 0.96
SCUBE2-205ENST00000519535 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
SCUBE2-205ENST00000519535 RNF17Q9BXT8 1623 aaKnown RBP21.07■□□□□ 0.96
SCUBE2-205ENST00000519535 ABCC3O15438 1527 aa21.06■□□□□ 0.96
SCUBE2-205ENST00000519535 DUOX2Q9NRD8 1548 aa21.06■□□□□ 0.96
SCUBE2-205ENST00000519535 SETD1BQ9UPS6 1966 aaKnown RBP21.05■□□□□ 0.96
SCUBE2-205ENST00000519535 PZPP20742 1482 aa21.05■□□□□ 0.96
SCUBE2-205ENST00000519535 NCOA1Q15788 1441 aa21.04■□□□□ 0.96
SCUBE2-205ENST00000519535 MYO3AQ8NEV4 1616 aa21.03■□□□□ 0.96
SCUBE2-205ENST00000519535 NCKAP5LQ9HCH0 1330 aa21.02■□□□□ 0.95
SCUBE2-205ENST00000519535 TNRQ92752 1358 aa21.01■□□□□ 0.95
SCUBE2-205ENST00000519535 EIF2AK4Q9P2K8 1649 aaKnown RBP21■□□□□ 0.95
SCUBE2-205ENST00000519535 ERBINQ96RT1 1412 aa21■□□□□ 0.95
SCUBE2-205ENST00000519535 ADGRL2O95490 1459 aa21■□□□□ 0.95
SCUBE2-205ENST00000519535 CAMSAP1Q5T5Y3 1602 aa21■□□□□ 0.95
SCUBE2-205ENST00000519535 CEP170BQ9Y4F5 1589 aaPredicted RBP20.99■□□□□ 0.95
SCUBE2-205ENST00000519535 FAM135AQ9P2D6 1515 aa20.99■□□□□ 0.95
SCUBE2-205ENST00000519535 ANKRD30AQ9BXX3 1397 aa20.98■□□□□ 0.95
SCUBE2-205ENST00000519535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.97■□□□□ 0.95
SCUBE2-205ENST00000519535 A2ML1A8K2U0 1454 aa20.95■□□□□ 0.94
SCUBE2-205ENST00000519535 PRDM15P57071 1507 aaPredicted RBP20.95■□□□□ 0.94
SCUBE2-205ENST00000519535 ZNF142P52746 1687 aaPredicted RBP20.95■□□□□ 0.94
SCUBE2-205ENST00000519535 PTPRTO14522 1441 aa20.94■□□□□ 0.94
SCUBE2-205ENST00000519535 ERVK-7P63135 1459 aa20.94■□□□□ 0.94
SCUBE2-205ENST00000519535 CEP152O94986 1710 aa20.93■□□□□ 0.94
SCUBE2-205ENST00000519535 DEPDC5O75140 1603 aa20.92■□□□□ 0.94
SCUBE2-205ENST00000519535 SPATA31D1Q6ZQQ2 1576 aa20.91■□□□□ 0.94
SCUBE2-205ENST00000519535 VWDEQ8N2E2 1590 aa20.9■□□□□ 0.94
SCUBE2-205ENST00000519535 ITGAEP38570 1179 aa20.9■□□□□ 0.94
SCUBE2-205ENST00000519535 PLA2R1Q13018 1463 aa20.89■□□□□ 0.94
SCUBE2-205ENST00000519535 ANKRD50Q9ULJ7 1429 aa20.89■□□□□ 0.94
SCUBE2-205ENST00000519535 CERKQ8TCT0 537 aa20.89■□□□□ 0.93
SCUBE2-205ENST00000519535 ZC3H13Q5T200 1668 aaKnown RBP20.88■□□□□ 0.93
SCUBE2-205ENST00000519535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.87■□□□□ 0.93
SCUBE2-205ENST00000519535 DMRT2Q9Y5R5 561 aa20.87■□□□□ 0.93
SCUBE2-205ENST00000519535 ARHGAP31Q2M1Z3 1444 aa20.87■□□□□ 0.93
SCUBE2-205ENST00000519535 FBXO41Q8TF61 875 aa20.86■□□□□ 0.93
SCUBE2-205ENST00000519535 LTBP4Q8N2S1 1624 aa20.86■□□□□ 0.93
SCUBE2-205ENST00000519535 NLRP1Q9C000 1473 aa20.85■□□□□ 0.93
SCUBE2-205ENST00000519535 NEURL4Q96JN8 1562 aa20.85■□□□□ 0.93
SCUBE2-205ENST00000519535 LMTK2Q8IWU2 1503 aa20.84■□□□□ 0.93
SCUBE2-205ENST00000519535 RRBP1Q9P2E9 1410 aaKnown RBP20.84■□□□□ 0.93
SCUBE2-205ENST00000519535 ROCK1Q13464 1354 aa20.84■□□□□ 0.93
SCUBE2-205ENST00000519535 ZNF335Q9H4Z2 1342 aaPredicted RBP20.83■□□□□ 0.93
SCUBE2-205ENST00000519535 PKD2Q13563 968 aa20.83■□□□□ 0.93
SCUBE2-205ENST00000519535 UGGT1Q9NYU2 1555 aa20.81■□□□□ 0.92
SCUBE2-205ENST00000519535 KANK1Q14678 1352 aa20.79■□□□□ 0.92
SCUBE2-205ENST00000519535 EFCAB6Q5THR3 1501 aa20.78■□□□□ 0.92
SCUBE2-205ENST00000519535 NOS1P29475 1434 aa20.78■□□□□ 0.92
SCUBE2-205ENST00000519535 SYNMO15061 1565 aa20.77■□□□□ 0.92
SCUBE2-205ENST00000519535 THEMISQ8N1K5 641 aaPredicted RBP20.77■□□□□ 0.92
SCUBE2-205ENST00000519535 CFAP65Q6ZU64 1925 aaKnown RBP20.76■□□□□ 0.91
SCUBE2-205ENST00000519535 LTKP29376 864 aa20.76■□□□□ 0.91
SCUBE2-205ENST00000519535 IDI1Q13907 227 aa20.76■□□□□ 0.91
SCUBE2-205ENST00000519535 UNC13BO14795 1591 aa20.74■□□□□ 0.91
SCUBE2-205ENST00000519535 ANKLE2Q86XL3 938 aa20.74■□□□□ 0.91
SCUBE2-205ENST00000519535 UBR1Q8IWV7 1749 aa20.73■□□□□ 0.91
SCUBE2-205ENST00000519535 NPHP4O75161 1426 aaPredicted RBP20.72■□□□□ 0.91
SCUBE2-205ENST00000519535 PIK3C2BO00750 1634 aa20.71■□□□□ 0.91
SCUBE2-205ENST00000519535 MED14O60244 1454 aa20.71■□□□□ 0.91
SCUBE2-205ENST00000519535 ARHGAP23Q9P227 1491 aa20.71■□□□□ 0.91
SCUBE2-205ENST00000519535 NAIPQ13075 1403 aa20.69■□□□□ 0.9
SCUBE2-205ENST00000519535 POLR1AO95602 1720 aaPredicted RBP20.68■□□□□ 0.9
SCUBE2-205ENST00000519535 NUP155O75694 1391 aa20.68■□□□□ 0.9
SCUBE2-205ENST00000519535 SLIT1O75093 1534 aa20.67■□□□□ 0.9
SCUBE2-205ENST00000519535 TXNDC2Q86VQ3 553 aa20.66■□□□□ 0.9
SCUBE2-205ENST00000519535 TMEM2Q9UHN6 1383 aa20.66■□□□□ 0.9
SCUBE2-205ENST00000519535 TET3O43151 1660 aa20.66■□□□□ 0.9
SCUBE2-205ENST00000519535 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
SCUBE2-205ENST00000519535 IQGAP3Q86VI3 1631 aa20.64■□□□□ 0.89
SCUBE2-205ENST00000519535 RPRD2Q5VT52 1461 aaKnown RBP20.63■□□□□ 0.89
SCUBE2-205ENST00000519535 E9PCH4 1651 aa20.63■□□□□ 0.89
SCUBE2-205ENST00000519535 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
SCUBE2-205ENST00000519535 ADGRB3O60242 1522 aa20.61■□□□□ 0.89
SCUBE2-205ENST00000519535 IQGAP1P46940 1657 aa20.61■□□□□ 0.89
SCUBE2-205ENST00000519535 SLC52A1Q9NWF4 448 aa20.6■□□□□ 0.89
SCUBE2-205ENST00000519535 STAG3Q9UJ98 1225 aa20.58■□□□□ 0.89
SCUBE2-205ENST00000519535 STRCP1A6NGW2 1772 aa20.58■□□□□ 0.89
SCUBE2-205ENST00000519535 GCC2Q8IWJ2 1684 aa20.58■□□□□ 0.88
SCUBE2-205ENST00000519535 IQSEC2Q5JU85 1478 aa20.57■□□□□ 0.88
SCUBE2-205ENST00000519535 HFM1A2PYH4 1435 aa20.57■□□□□ 0.88
SCUBE2-205ENST00000519535 ZFYVE9O95405 1425 aa20.57■□□□□ 0.88
SCUBE2-205ENST00000519535 TMEM131LA2VDJ0 1609 aa20.54■□□□□ 0.88
SCUBE2-205ENST00000519535 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
SCUBE2-205ENST00000519535 UBAP1LF5GYI3 381 aa20.53■□□□□ 0.88
SCUBE2-205ENST00000519535 SLC26A8Q96RN1 970 aa20.53■□□□□ 0.88
SCUBE2-205ENST00000519535 ALKQ9UM73 1620 aa20.53■□□□□ 0.88
SCUBE2-205ENST00000519535 KDM5AP29375 1690 aaKnown RBP20.52■□□□□ 0.88
SCUBE2-205ENST00000519535 EID1Q9Y6B2 187 aa20.52■□□□□ 0.88
SCUBE2-205ENST00000519535 CPS1P31327 1500 aa20.52■□□□□ 0.87
SCUBE2-205ENST00000519535 LRRC7Q96NW7 1537 aa20.52■□□□□ 0.87
SCUBE2-205ENST00000519535 CHGAP10645 457 aaKnown RBP20.51■□□□□ 0.87
SCUBE2-205ENST00000519535 RIMS2Q9UQ26 1411 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms