RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 EHMT2Q96KQ7 1210 aa10.66□□□□□ -0.7
CTNNA1-214ENST00000519116 A2ML1A8K2U0 1454 aa10.66□□□□□ -0.7
CTNNA1-214ENST00000519116 MROH2AA6NES4 1674 aa10.66□□□□□ -0.7
CTNNA1-214ENST00000519116 SAMD9LQ8IVG5 1584 aa10.65□□□□□ -0.7
CTNNA1-214ENST00000519116 A2MP01023 1474 aa10.65□□□□□ -0.7
CTNNA1-214ENST00000519116 CCDC18Q5T9S5 1454 aa10.65□□□□□ -0.7
CTNNA1-214ENST00000519116 SHANK2Q9UPX8 1470 aa10.65□□□□□ -0.7
CTNNA1-214ENST00000519116 KIAA1107Q9UPP5 1409 aa10.65□□□□□ -0.7
CTNNA1-214ENST00000519116 KIDINS220Q9ULH0 1771 aa10.65□□□□□ -0.71
CTNNA1-214ENST00000519116 POLA2Q14181 598 aa10.64□□□□□ -0.71
CTNNA1-214ENST00000519116 ANKLE2Q86XL3 938 aa10.64□□□□□ -0.71
CTNNA1-214ENST00000519116 PREX2Q70Z35 1606 aa10.64□□□□□ -0.71
CTNNA1-214ENST00000519116 MYO3AQ8NEV4 1616 aa10.63□□□□□ -0.71
CTNNA1-214ENST00000519116 CASKIN1Q8WXD9 1431 aa10.63□□□□□ -0.71
CTNNA1-214ENST00000519116 ZNF142P52746 1687 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1-214ENST00000519116 ITSN2Q9NZM3 1697 aa10.63□□□□□ -0.71
CTNNA1-214ENST00000519116 PLEKHH2Q8IVE3 1493 aa10.62□□□□□ -0.71
CTNNA1-214ENST00000519116 CDC42BPBQ9Y5S2 1711 aa10.62□□□□□ -0.71
CTNNA1-214ENST00000519116 FOXD4L1Q9NU39 408 aa10.62□□□□□ -0.71
CTNNA1-214ENST00000519116 CFDP1Q9UEE9 299 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-214ENST00000519116 ATF5Q9Y2D1 282 aaPredicted RBP10.62□□□□□ -0.71
CTNNA1-214ENST00000519116 SYCP2Q9BX26 1530 aa10.62□□□□□ -0.71
CTNNA1-214ENST00000519116 TNRQ92752 1358 aa10.62□□□□□ -0.71
CTNNA1-214ENST00000519116 THEMISQ8N1K5 641 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-214ENST00000519116 ATP7AQ04656 1500 aa10.61□□□□□ -0.71
CTNNA1-214ENST00000519116 GPATCH8Q9UKJ3 1502 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-214ENST00000519116 PLXNC1O60486 1568 aa10.6□□□□□ -0.71
CTNNA1-214ENST00000519116 FBXO31Q5XUX0 539 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-214ENST00000519116 CCNB3Q8WWL7 1395 aa10.58□□□□□ -0.72
CTNNA1-214ENST00000519116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.58□□□□□ -0.72
CTNNA1-214ENST00000519116 DNMT1P26358 1616 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-214ENST00000519116 NPHP4O75161 1426 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-214ENST00000519116 CLTCQ00610 1675 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-214ENST00000519116 DHX29Q7Z478 1369 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-214ENST00000519116 NEURL4Q96JN8 1562 aa10.56□□□□□ -0.72
CTNNA1-214ENST00000519116 RGS17Q9UGC6 210 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-214ENST00000519116 MIA2Q96PC5 1412 aa10.56□□□□□ -0.72
CTNNA1-214ENST00000519116 INO80Q9ULG1 1556 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-214ENST00000519116 WASHC2CQ9Y4E1 1318 aa10.56□□□□□ -0.72
CTNNA1-214ENST00000519116 SUPT6HQ7KZ85 1726 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-214ENST00000519116 MED14O60244 1454 aa10.55□□□□□ -0.72
CTNNA1-214ENST00000519116 PZPP20742 1482 aa10.55□□□□□ -0.72
CTNNA1-214ENST00000519116 FAM135AQ9P2D6 1515 aa10.55□□□□□ -0.72
CTNNA1-214ENST00000519116 KIF3BO15066 747 aa10.55□□□□□ -0.72
CTNNA1-214ENST00000519116 RBM42Q9BTD8 480 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-214ENST00000519116 RTEL1-TNFRSF6BF6WH68 1400 aa10.55□□□□□ -0.72
CTNNA1-214ENST00000519116 VWDEQ8N2E2 1590 aa10.55□□□□□ -0.72
CTNNA1-214ENST00000519116 FYCO1Q9BQS8 1478 aa10.55□□□□□ -0.72
CTNNA1-214ENST00000519116 NLRP1Q9C000 1473 aa10.55□□□□□ -0.72
CTNNA1-214ENST00000519116 ZBTB22O15209 634 aa10.54□□□□□ -0.72
CTNNA1-214ENST00000519116 ALKQ9UM73 1620 aa10.53□□□□□ -0.72
CTNNA1-214ENST00000519116 CDC42BPAQ5VT25 1732 aa10.53□□□□□ -0.72
CTNNA1-214ENST00000519116 LRRC7Q96NW7 1537 aa10.52□□□□□ -0.73
CTNNA1-214ENST00000519116 ZNF644Q9H582 1327 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-214ENST00000519116 MTUS2Q5JR59 1369 aa10.52□□□□□ -0.73
CTNNA1-214ENST00000519116 MBD5Q9P267 1494 aa10.51□□□□□ -0.73
CTNNA1-214ENST00000519116 KDM5DQ9BY66 1539 aa10.51□□□□□ -0.73
CTNNA1-214ENST00000519116 UGGT1Q9NYU2 1555 aa10.51□□□□□ -0.73
CTNNA1-214ENST00000519116 LRRIQ1Q96JM4 1722 aa10.5□□□□□ -0.73
CTNNA1-214ENST00000519116 DEPDC5O75140 1603 aa10.49□□□□□ -0.73
CTNNA1-214ENST00000519116 RSPH4AQ5TD94 716 aa10.49□□□□□ -0.73
CTNNA1-214ENST00000519116 POTEAQ6S8J7 498 aa10.49□□□□□ -0.73
CTNNA1-214ENST00000519116 RNF17Q9BXT8 1623 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-214ENST00000519116 ADGBQ8N7X0 1667 aa10.47□□□□□ -0.73
CTNNA1-214ENST00000519116 POLR1AO95602 1720 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-214ENST00000519116 FAM135BQ49AJ0 1406 aa10.47□□□□□ -0.73
CTNNA1-214ENST00000519116 SYNMO15061 1565 aa10.45□□□□□ -0.74
CTNNA1-214ENST00000519116 CCDC141Q6ZP82 1450 aa10.45□□□□□ -0.74
CTNNA1-214ENST00000519116 IQGAP1P46940 1657 aa10.44□□□□□ -0.74
CTNNA1-214ENST00000519116 SCAF11Q99590 1463 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-214ENST00000519116 TSPY4P0CV99 314 aa10.44□□□□□ -0.74
CTNNA1-214ENST00000519116 TSPY10P0CW01 314 aa10.44□□□□□ -0.74
CTNNA1-214ENST00000519116 TXNDC2Q86VQ3 553 aa10.44□□□□□ -0.74
CTNNA1-214ENST00000519116 CEP162Q5TB80 1403 aa10.43□□□□□ -0.74
CTNNA1-214ENST00000519116 LTKP29376 864 aa10.43□□□□□ -0.74
CTNNA1-214ENST00000519116 EID1Q9Y6B2 187 aa10.43□□□□□ -0.74
CTNNA1-214ENST00000519116 CHRDL2Q6WN34 429 aa10.42□□□□□ -0.74
CTNNA1-214ENST00000519116 ERVK-7P63135 1459 aa10.42□□□□□ -0.74
CTNNA1-214ENST00000519116 TIAM1Q13009 1591 aa10.41□□□□□ -0.74
CTNNA1-214ENST00000519116 ABCC3O15438 1527 aa10.4□□□□□ -0.74
CTNNA1-214ENST00000519116 EHBP1L1Q8N3D4 1523 aa10.4□□□□□ -0.74
CTNNA1-214ENST00000519116 TMEM94Q12767 1356 aa10.39□□□□□ -0.75
CTNNA1-214ENST00000519116 NCOA2Q15596 1464 aa10.39□□□□□ -0.75
CTNNA1-214ENST00000519116 ARHGAP23Q9P227 1491 aa10.39□□□□□ -0.75
CTNNA1-214ENST00000519116 KCNA6P17658 529 aa10.39□□□□□ -0.75
CTNNA1-214ENST00000519116 CAMSAP2Q08AD1 1489 aa10.38□□□□□ -0.75
CTNNA1-214ENST00000519116 PROSER2Q86WR7 435 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-214ENST00000519116 SLIT1O75093 1534 aa10.38□□□□□ -0.75
CTNNA1-214ENST00000519116 STRCP1A6NGW2 1772 aa10.37□□□□□ -0.75
CTNNA1-214ENST00000519116 UPF1Q92900 1129 aaKnown RBP eCLIP10.37□□□□□ -0.75
CTNNA1-214ENST00000519116 ZBTB12Q9Y330 459 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-214ENST00000519116 JCADQ9P266 1359 aa10.37□□□□□ -0.75
CTNNA1-214ENST00000519116 TMEM2Q9UHN6 1383 aa10.37□□□□□ -0.75
CTNNA1-214ENST00000519116 LRRC9Q6ZRR7 1453 aa10.36□□□□□ -0.75
CTNNA1-214ENST00000519116 STAG3Q9UJ98 1225 aa10.36□□□□□ -0.75
CTNNA1-214ENST00000519116 ZNF772Q68DY9 489 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-214ENST00000519116 ZC3H13Q5T200 1668 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-214ENST00000519116 ARHGAP31Q2M1Z3 1444 aa10.34□□□□□ -0.75
CTNNA1-214ENST00000519116 AKT1S1Q96B36 256 aa10.34□□□□□ -0.75
CTNNA1-214ENST00000519116 SLAIN2Q9P270 581 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms