RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 CLIP1P30622 1438 aa15.74■□□□□ 0.11
TTC1-202ENST00000518560 CASKIN1Q8WXD9 1431 aa15.74■□□□□ 0.11
TTC1-202ENST00000518560 YEATS2Q9ULM3 1422 aa15.74■□□□□ 0.11
TTC1-202ENST00000518560 ZFYVE16Q7Z3T8 1539 aa15.73■□□□□ 0.11
TTC1-202ENST00000518560 MIER1Q8N108 512 aa15.72■□□□□ 0.11
TTC1-202ENST00000518560 FAM163AQ96GL9 167 aaPredicted RBP15.72■□□□□ 0.11
TTC1-202ENST00000518560 RIMS1Q86UR5 1692 aaKnown RBP15.72■□□□□ 0.11
TTC1-202ENST00000518560 ARHGAP5Q13017 1502 aa15.72■□□□□ 0.11
TTC1-202ENST00000518560 PREX2Q70Z35 1606 aa15.72■□□□□ 0.11
TTC1-202ENST00000518560 POGZQ7Z3K3 1410 aa15.71■□□□□ 0.11
TTC1-202ENST00000518560 SCAPERQ9BY12 1400 aa15.71■□□□□ 0.11
TTC1-202ENST00000518560 CDC42BPAQ5VT25 1732 aa15.71■□□□□ 0.1
TTC1-202ENST00000518560 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.1
TTC1-202ENST00000518560 FYCO1Q9BQS8 1478 aa15.71■□□□□ 0.1
TTC1-202ENST00000518560 BMP2KQ9NSY1 1161 aaPredicted RBP15.69■□□□□ 0.1
TTC1-202ENST00000518560 ARID4BQ4LE39 1312 aaPredicted RBP15.68■□□□□ 0.1
TTC1-202ENST00000518560 PTPRMP28827 1452 aa15.68■□□□□ 0.1
TTC1-202ENST00000518560 CDK11AQ9UQ88 783 aaPredicted RBP15.68■□□□□ 0.1
TTC1-202ENST00000518560 MAP3K13O43283 966 aa15.66■□□□□ 0.1
TTC1-202ENST00000518560 TIE1P35590 1138 aa15.66■□□□□ 0.1
TTC1-202ENST00000518560 ITSN2Q9NZM3 1697 aa15.66■□□□□ 0.1
TTC1-202ENST00000518560 FER1L4A9Z1Z3 1794 aa15.64■□□□□ 0.1
TTC1-202ENST00000518560 KDM5CP41229 1560 aa15.64■□□□□ 0.09
TTC1-202ENST00000518560 EFCAB2Q5VUJ9 269 aa15.64■□□□□ 0.09
TTC1-202ENST00000518560 ABCC1P33527 1531 aa15.63■□□□□ 0.09
TTC1-202ENST00000518560 MAGI2Q86UL8 1455 aa15.63■□□□□ 0.09
TTC1-202ENST00000518560 ARHGEF12Q9NZN5 1544 aa15.63■□□□□ 0.09
TTC1-202ENST00000518560 ABCA6Q8N139 1617 aa15.62■□□□□ 0.09
TTC1-202ENST00000518560 SEC24BO95487 1268 aa15.62■□□□□ 0.09
TTC1-202ENST00000518560 TRPC6Q9Y210 931 aa15.62■□□□□ 0.09
TTC1-202ENST00000518560 DIP2CQ9Y2E4 1556 aa15.62■□□□□ 0.09
TTC1-202ENST00000518560 CEP162Q5TB80 1403 aa15.61■□□□□ 0.09
TTC1-202ENST00000518560 ZNF518AQ6AHZ1 1483 aa15.61■□□□□ 0.09
TTC1-202ENST00000518560 SAMD9LQ8IVG5 1584 aa15.61■□□□□ 0.09
TTC1-202ENST00000518560 RASEFQ8IZ41 740 aa15.6■□□□□ 0.09
TTC1-202ENST00000518560 MLECQ14165 292 aa15.59■□□□□ 0.09
TTC1-202ENST00000518560 AFAP1Q8N556 730 aa15.59■□□□□ 0.09
TTC1-202ENST00000518560 TRAPPC8Q9Y2L5 1435 aa15.59■□□□□ 0.09
TTC1-202ENST00000518560 POTEFA5A3E0 1075 aa15.58■□□□□ 0.08
TTC1-202ENST00000518560 C9orf84Q5VXU9 1444 aa15.58■□□□□ 0.08
TTC1-202ENST00000518560 ATP10AO60312 1499 aa15.58■□□□□ 0.08
TTC1-202ENST00000518560 SYCP2Q9BX26 1530 aa15.57■□□□□ 0.08
TTC1-202ENST00000518560 KIDINS220Q9ULH0 1771 aa15.57■□□□□ 0.08
TTC1-202ENST00000518560 GPATCH8Q9UKJ3 1502 aaKnown RBP15.55■□□□□ 0.08
TTC1-202ENST00000518560 LCE2DQ5TA82 110 aaPredicted RBP15.55■□□□□ 0.08
TTC1-202ENST00000518560 PLCD3Q8N3E9 789 aa15.55■□□□□ 0.08
TTC1-202ENST00000518560 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
TTC1-202ENST00000518560 LMTK3Q96Q04 1460 aa15.53■□□□□ 0.08
TTC1-202ENST00000518560 TTLL13PA6NNM8 815 aa15.53■□□□□ 0.08
TTC1-202ENST00000518560 MYT1LQ9UL68 1186 aa15.53■□□□□ 0.08
TTC1-202ENST00000518560 ZNF777Q9ULD5 760 aaPredicted RBP15.53■□□□□ 0.08
TTC1-202ENST00000518560 EHBP1L1Q8N3D4 1523 aa15.53■□□□□ 0.08
TTC1-202ENST00000518560 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.08
TTC1-202ENST00000518560 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.08
TTC1-202ENST00000518560 MLH3Q9UHC1 1453 aa15.52■□□□□ 0.07
TTC1-202ENST00000518560 REREQ9P2R6 1566 aa15.51■□□□□ 0.07
TTC1-202ENST00000518560 SGIP1Q9BQI5 828 aa15.49■□□□□ 0.07
TTC1-202ENST00000518560 COLQQ9Y215 455 aaPredicted RBP15.49■□□□□ 0.07
TTC1-202ENST00000518560 PCDHB13Q9Y5F0 798 aa15.49■□□□□ 0.07
TTC1-202ENST00000518560 CCNB3Q8WWL7 1395 aa15.49■□□□□ 0.07
TTC1-202ENST00000518560 SUPT6HQ7KZ85 1726 aaKnown RBP15.48■□□□□ 0.07
TTC1-202ENST00000518560 ZBTB47Q9UFB7 747 aaPredicted RBP15.48■□□□□ 0.07
TTC1-202ENST00000518560 INO80Q9ULG1 1556 aaPredicted RBP15.48■□□□□ 0.07
TTC1-202ENST00000518560 HNRNPMP52272 730 aaKnown RBP eCLIP15.47■□□□□ 0.07
TTC1-202ENST00000518560 IER5LQ5T953 404 aa15.47■□□□□ 0.07
TTC1-202ENST00000518560 TRIM35Q9UPQ4 493 aa15.46■□□□□ 0.07
TTC1-202ENST00000518560 C3P01024 1663 aa15.46■□□□□ 0.07
TTC1-202ENST00000518560 PREX1Q8TCU6 1659 aa15.46■□□□□ 0.07
TTC1-202ENST00000518560 ATP7AQ04656 1500 aa15.46■□□□□ 0.07
TTC1-202ENST00000518560 CEBPAP49715 358 aaPredicted RBP15.45■□□□□ 0.06
TTC1-202ENST00000518560 HSPA2P54652 639 aa15.45■□□□□ 0.06
TTC1-202ENST00000518560 CFDP1Q9UEE9 299 aaPredicted RBP15.45■□□□□ 0.06
TTC1-202ENST00000518560 ZNF644Q9H582 1327 aaPredicted RBP15.44■□□□□ 0.06
TTC1-202ENST00000518560 AGLP35573 1532 aa15.44■□□□□ 0.06
TTC1-202ENST00000518560 VPS8Q8N3P4 1428 aa15.43■□□□□ 0.06
TTC1-202ENST00000518560 NCOA2Q15596 1464 aa15.42■□□□□ 0.06
TTC1-202ENST00000518560 ILDR1Q86SU0 546 aaPredicted RBP15.42■□□□□ 0.06
TTC1-202ENST00000518560 PLEKHH2Q8IVE3 1493 aa15.41■□□□□ 0.06
TTC1-202ENST00000518560 KIAA1107Q9UPP5 1409 aa15.41■□□□□ 0.06
TTC1-202ENST00000518560 ADGBQ8N7X0 1667 aa15.41■□□□□ 0.06
TTC1-202ENST00000518560 SPAG9O60271 1321 aaKnown RBP15.41■□□□□ 0.06
TTC1-202ENST00000518560 PLXNC1O60486 1568 aa15.41■□□□□ 0.06
TTC1-202ENST00000518560 CLTCQ00610 1675 aaKnown RBP15.39■□□□□ 0.05
TTC1-202ENST00000518560 CAMSAP2Q08AD1 1489 aa15.39■□□□□ 0.05
TTC1-202ENST00000518560 MBD5Q9P267 1494 aa15.39■□□□□ 0.05
TTC1-202ENST00000518560 MROH2AA6NES4 1674 aa15.37■□□□□ 0.05
TTC1-202ENST00000518560 A2MP01023 1474 aa15.36■□□□□ 0.05
TTC1-202ENST00000518560 LRRC9Q6ZRR7 1453 aa15.36■□□□□ 0.05
TTC1-202ENST00000518560 STRCQ7RTU9 1775 aa15.35■□□□□ 0.05
TTC1-202ENST00000518560 CDAN1Q8IWY9 1227 aa15.35■□□□□ 0.05
TTC1-202ENST00000518560 SLAIN1Q8ND83 568 aa15.35■□□□□ 0.05
TTC1-202ENST00000518560 NUBP1P53384 320 aa15.34■□□□□ 0.05
TTC1-202ENST00000518560 FAM212AQ96EL1 285 aa15.34■□□□□ 0.05
TTC1-202ENST00000518560 IFNL1Q8IU54 200 aa15.33■□□□□ 0.04
TTC1-202ENST00000518560 TMEM106CQ9BVX2 250 aa15.33■□□□□ 0.04
TTC1-202ENST00000518560 SETD1BQ9UPS6 1966 aaKnown RBP15.33■□□□□ 0.04
TTC1-202ENST00000518560 PLCG2P16885 1265 aa15.32■□□□□ 0.04
TTC1-202ENST00000518560 KANK4Q5T7N3 995 aaPredicted RBP15.32■□□□□ 0.04
TTC1-202ENST00000518560 UHRF1BP1Q6BDS2 1440 aa15.32■□□□□ 0.04
TTC1-202ENST00000518560 CCDC141Q6ZP82 1450 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms