RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 TCOF1Q13428 1488 aaKnown RBP16.19■□□□□ 0.18
SPIDR-206ENST00000518074 CLTCQ00610 1675 aaKnown RBP16.18■□□□□ 0.18
SPIDR-206ENST00000518074 SHANK2Q9UPX8 1470 aa16.18■□□□□ 0.18
SPIDR-206ENST00000518074 PTPN23Q9H3S7 1636 aa16.17■□□□□ 0.18
SPIDR-206ENST00000518074 EIF2AK4Q9P2K8 1649 aaKnown RBP16.17■□□□□ 0.18
SPIDR-206ENST00000518074 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
SPIDR-206ENST00000518074 RNF17Q9BXT8 1623 aaKnown RBP16.15■□□□□ 0.18
SPIDR-206ENST00000518074 CROCC2H7BZ55 1655 aa16.15■□□□□ 0.18
SPIDR-206ENST00000518074 PTPRKQ15262 1439 aa16.14■□□□□ 0.18
SPIDR-206ENST00000518074 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.18
SPIDR-206ENST00000518074 KDM5DQ9BY66 1539 aa16.14■□□□□ 0.17
SPIDR-206ENST00000518074 GGT6Q6P531 493 aa16.13■□□□□ 0.17
SPIDR-206ENST00000518074 DUOX2Q9NRD8 1548 aa16.13■□□□□ 0.17
SPIDR-206ENST00000518074 HSPA2P54652 639 aa16.13■□□□□ 0.17
SPIDR-206ENST00000518074 DIEXFQ68CQ4 756 aaKnown RBP16.13■□□□□ 0.17
SPIDR-206ENST00000518074 DNMT1P26358 1616 aaKnown RBP16.12■□□□□ 0.17
SPIDR-206ENST00000518074 ZNF142P52746 1687 aaPredicted RBP16.12■□□□□ 0.17
SPIDR-206ENST00000518074 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
SPIDR-206ENST00000518074 ABCC5O15440 1437 aa16.12■□□□□ 0.17
SPIDR-206ENST00000518074 KIF3BO15066 747 aa16.11■□□□□ 0.17
SPIDR-206ENST00000518074 ZC3H13Q5T200 1668 aaKnown RBP16.11■□□□□ 0.17
SPIDR-206ENST00000518074 STRCQ7RTU9 1775 aa16.1■□□□□ 0.17
SPIDR-206ENST00000518074 PTPRTO14522 1441 aa16.09■□□□□ 0.17
SPIDR-206ENST00000518074 DAPK1P53355 1430 aa16.09■□□□□ 0.17
SPIDR-206ENST00000518074 PZPP20742 1482 aa16.09■□□□□ 0.17
SPIDR-206ENST00000518074 MYO3AQ8NEV4 1616 aa16.08■□□□□ 0.17
SPIDR-206ENST00000518074 ERBINQ96RT1 1412 aa16.08■□□□□ 0.16
SPIDR-206ENST00000518074 NCOA1Q15788 1441 aa16.06■□□□□ 0.16
SPIDR-206ENST00000518074 PLA2R1Q13018 1463 aa16.06■□□□□ 0.16
SPIDR-206ENST00000518074 WASHC2CQ9Y4E1 1318 aa16.05■□□□□ 0.16
SPIDR-206ENST00000518074 CEP170BQ9Y4F5 1589 aaPredicted RBP16.05■□□□□ 0.16
SPIDR-206ENST00000518074 A2ML1A8K2U0 1454 aa16.05■□□□□ 0.16
SPIDR-206ENST00000518074 MROH1Q8NDA8 1641 aa16.05■□□□□ 0.16
SPIDR-206ENST00000518074 ABCC3O15438 1527 aa16.04■□□□□ 0.16
SPIDR-206ENST00000518074 ADGRL2O95490 1459 aa16.04■□□□□ 0.16
SPIDR-206ENST00000518074 KIF15Q9NS87 1388 aa16.04■□□□□ 0.16
SPIDR-206ENST00000518074 ANKRD30AQ9BXX3 1397 aa16.03■□□□□ 0.16
SPIDR-206ENST00000518074 DEPDC5O75140 1603 aa16.02■□□□□ 0.16
SPIDR-206ENST00000518074 CAMSAP1Q5T5Y3 1602 aa16.02■□□□□ 0.16
SPIDR-206ENST00000518074 PRDM15P57071 1507 aaPredicted RBP16.02■□□□□ 0.16
SPIDR-206ENST00000518074 TNRQ92752 1358 aa16.02■□□□□ 0.16
SPIDR-206ENST00000518074 ZNF316A6NFI3 1004 aaPredicted RBP16.02■□□□□ 0.15
SPIDR-206ENST00000518074 ILDR1Q86SU0 546 aaPredicted RBP16.02■□□□□ 0.15
SPIDR-206ENST00000518074 NLRP1Q9C000 1473 aa16.01■□□□□ 0.15
SPIDR-206ENST00000518074 PKD2Q13563 968 aa16■□□□□ 0.15
SPIDR-206ENST00000518074 FBXO41Q8TF61 875 aa16■□□□□ 0.15
SPIDR-206ENST00000518074 ARHGAP31Q2M1Z3 1444 aa16■□□□□ 0.15
SPIDR-206ENST00000518074 SPATA31D1Q6ZQQ2 1576 aa16■□□□□ 0.15
SPIDR-206ENST00000518074 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.15
SPIDR-206ENST00000518074 FAM50AQ14320 339 aaKnown RBP15.98■□□□□ 0.15
SPIDR-206ENST00000518074 LMTK2Q8IWU2 1503 aa15.98■□□□□ 0.15
SPIDR-206ENST00000518074 RRP7BPQ9NSQ0 103 aa15.97■□□□□ 0.15
SPIDR-206ENST00000518074 VWDEQ8N2E2 1590 aa15.97■□□□□ 0.15
SPIDR-206ENST00000518074 CEP152O94986 1710 aa15.96■□□□□ 0.15
SPIDR-206ENST00000518074 KANK1Q14678 1352 aa15.95■□□□□ 0.14
SPIDR-206ENST00000518074 ERVK-7P63135 1459 aa15.95■□□□□ 0.14
SPIDR-206ENST00000518074 FBXO31Q5XUX0 539 aaPredicted RBP15.95■□□□□ 0.14
SPIDR-206ENST00000518074 CERKQ8TCT0 537 aa15.95■□□□□ 0.14
SPIDR-206ENST00000518074 EIF5BO60841 1220 aaKnown RBP15.95■□□□□ 0.14
SPIDR-206ENST00000518074 ROCK1Q13464 1354 aa15.94■□□□□ 0.14
SPIDR-206ENST00000518074 IQSEC2Q5JU85 1478 aa15.94■□□□□ 0.14
SPIDR-206ENST00000518074 POLR1AO95602 1720 aaPredicted RBP15.92■□□□□ 0.14
SPIDR-206ENST00000518074 THEMISQ8N1K5 641 aaPredicted RBP15.92■□□□□ 0.14
SPIDR-206ENST00000518074 LTBP4Q8N2S1 1624 aa15.91■□□□□ 0.14
SPIDR-206ENST00000518074 YTHDC1Q96MU7 727 aaKnown RBP15.9■□□□□ 0.14
SPIDR-206ENST00000518074 UGGT1Q9NYU2 1555 aa15.9■□□□□ 0.14
SPIDR-206ENST00000518074 NCKAP5LQ9HCH0 1330 aa15.9■□□□□ 0.14
SPIDR-206ENST00000518074 CHIC2Q9UKJ5 165 aa15.9■□□□□ 0.14
SPIDR-206ENST00000518074 DHX57Q6P158 1386 aaKnown RBP15.89■□□□□ 0.13
SPIDR-206ENST00000518074 ANKRD50Q9ULJ7 1429 aa15.89■□□□□ 0.13
SPIDR-206ENST00000518074 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
SPIDR-206ENST00000518074 MED14O60244 1454 aa15.89■□□□□ 0.13
SPIDR-206ENST00000518074 KDM5AP29375 1690 aaKnown RBP15.88■□□□□ 0.13
SPIDR-206ENST00000518074 RRBP1Q9P2E9 1410 aaKnown RBP15.87■□□□□ 0.13
SPIDR-206ENST00000518074 UNC13BO14795 1591 aa15.87■□□□□ 0.13
SPIDR-206ENST00000518074 NEURL4Q96JN8 1562 aa15.87■□□□□ 0.13
SPIDR-206ENST00000518074 ANKLE2Q86XL3 938 aa15.86■□□□□ 0.13
SPIDR-206ENST00000518074 EFCAB6Q5THR3 1501 aa15.86■□□□□ 0.13
SPIDR-206ENST00000518074 RPRD2Q5VT52 1461 aaKnown RBP15.86■□□□□ 0.13
SPIDR-206ENST00000518074 UBR1Q8IWV7 1749 aa15.86■□□□□ 0.13
SPIDR-206ENST00000518074 NEUROD1Q13562 356 aa15.85■□□□□ 0.13
SPIDR-206ENST00000518074 TET3O43151 1660 aa15.84■□□□□ 0.13
SPIDR-206ENST00000518074 NOS1P29475 1434 aa15.83■□□□□ 0.13
SPIDR-206ENST00000518074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.133e-6■■■□□ 15.2
SPIDR-206ENST00000518074 SLIT1O75093 1534 aa15.83■□□□□ 0.12
SPIDR-206ENST00000518074 MIER1Q8N108 512 aa15.83■□□□□ 0.12
SPIDR-206ENST00000518074 ARHGAP23Q9P227 1491 aa15.83■□□□□ 0.12
SPIDR-206ENST00000518074 GCC2Q8IWJ2 1684 aa15.82■□□□□ 0.12
SPIDR-206ENST00000518074 NPHP4O75161 1426 aaPredicted RBP15.81■□□□□ 0.12
SPIDR-206ENST00000518074 CFAP65Q6ZU64 1925 aaKnown RBP15.81■□□□□ 0.12
SPIDR-206ENST00000518074 CPS1P31327 1500 aa15.8■□□□□ 0.12
SPIDR-206ENST00000518074 IQGAP3Q86VI3 1631 aa15.8■□□□□ 0.12
SPIDR-206ENST00000518074 IQGAP1P46940 1657 aa15.8■□□□□ 0.12
SPIDR-206ENST00000518074 RAB3GAP2Q9H2M9 1393 aa15.79■□□□□ 0.12
SPIDR-206ENST00000518074 SYNMO15061 1565 aa15.79■□□□□ 0.12
SPIDR-206ENST00000518074 PIK3C2BO00750 1634 aa15.79■□□□□ 0.12
SPIDR-206ENST00000518074 SLC52A1Q9NWF4 448 aa15.79■□□□□ 0.12
SPIDR-206ENST00000518074 ACIN1Q9UKV3 1341 aaKnown RBP15.79■□□□□ 0.12
SPIDR-206ENST00000518074 SCAF11Q99590 1463 aaKnown RBP15.77■□□□□ 0.11
SPIDR-206ENST00000518074 ZNF335Q9H4Z2 1342 aaPredicted RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms