RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 FER1L4A9Z1Z3 1794 aa17.92■□□□□ 0.46
AP3B1-203ENST00000517940 KDM4FA0A1W2PPD8 638 aa17.91■□□□□ 0.46
AP3B1-203ENST00000517940 KIF3BO15066 747 aa17.91■□□□□ 0.46
AP3B1-203ENST00000517940 CEP152O94986 1710 aa17.9■□□□□ 0.46
AP3B1-203ENST00000517940 KDM5DQ9BY66 1539 aa17.9■□□□□ 0.46
AP3B1-203ENST00000517940 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
AP3B1-203ENST00000517940 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
AP3B1-203ENST00000517940 CLTCQ00610 1675 aaKnown RBP17.89■□□□□ 0.45
AP3B1-203ENST00000517940 RIMS1Q86UR5 1692 aaKnown RBP17.89■□□□□ 0.45
AP3B1-203ENST00000517940 ABCC3O15438 1527 aa17.88■□□□□ 0.45
AP3B1-203ENST00000517940 MLECQ14165 292 aa17.88■□□□□ 0.45
AP3B1-203ENST00000517940 IQGAP3Q86VI3 1631 aa17.87■□□□□ 0.45
AP3B1-203ENST00000517940 SETD5Q9C0A6 1442 aa17.86■□□□□ 0.45
AP3B1-203ENST00000517940 MROH2AA6NES4 1674 aa17.85■□□□□ 0.45
AP3B1-203ENST00000517940 ZC3H13Q5T200 1668 aaKnown RBP17.85■□□□□ 0.45
AP3B1-203ENST00000517940 LMTK2Q8IWU2 1503 aa17.85■□□□□ 0.45
AP3B1-203ENST00000517940 RAB3GAP2Q9H2M9 1393 aa17.85■□□□□ 0.45
AP3B1-203ENST00000517940 FAM135AQ9P2D6 1515 aa17.85■□□□□ 0.45
AP3B1-203ENST00000517940 GGT6Q6P531 493 aa17.84■□□□□ 0.45
AP3B1-203ENST00000517940 C3P01024 1663 aa17.83■□□□□ 0.45
AP3B1-203ENST00000517940 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.45
AP3B1-203ENST00000517940 PZPP20742 1482 aa17.82■□□□□ 0.44
AP3B1-203ENST00000517940 TET3O43151 1660 aa17.8■□□□□ 0.44
AP3B1-203ENST00000517940 EFCAB6Q5THR3 1501 aa17.8■□□□□ 0.44
AP3B1-203ENST00000517940 PTPRMP28827 1452 aa17.8■□□□□ 0.44
AP3B1-203ENST00000517940 E9PCH4 1651 aa17.78■□□□□ 0.44
AP3B1-203ENST00000517940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.77■□□□□ 0.44
AP3B1-203ENST00000517940 CNTLNQ9NXG0 1405 aa17.77■□□□□ 0.44
AP3B1-203ENST00000517940 NPATQ14207 1427 aa17.76■□□□□ 0.43
AP3B1-203ENST00000517940 PPP6R1Q9UPN7 881 aa17.76■□□□□ 0.43
AP3B1-203ENST00000517940 NUP155O75694 1391 aa17.76■□□□□ 0.43
AP3B1-203ENST00000517940 ZMYM3Q14202 1370 aa17.75■□□□□ 0.43
AP3B1-203ENST00000517940 ARHGAP31Q2M1Z3 1444 aa17.74■□□□□ 0.43
AP3B1-203ENST00000517940 WASHC2CQ9Y4E1 1318 aa17.73■□□□□ 0.43
AP3B1-203ENST00000517940 CEBPAP49715 358 aaPredicted RBP17.73■□□□□ 0.43
AP3B1-203ENST00000517940 PCGF6Q9BYE7 350 aa17.73■□□□□ 0.43
AP3B1-203ENST00000517940 PREX1Q8TCU6 1659 aa17.73■□□□□ 0.43
AP3B1-203ENST00000517940 CFAP65Q6ZU64 1925 aaKnown RBP17.72■□□□□ 0.43
AP3B1-203ENST00000517940 SPATA31D1Q6ZQQ2 1576 aa17.72■□□□□ 0.43
AP3B1-203ENST00000517940 SYNMO15061 1565 aa17.7■□□□□ 0.42
AP3B1-203ENST00000517940 ERVK-7P63135 1459 aa17.7■□□□□ 0.42
AP3B1-203ENST00000517940 KANK1Q14678 1352 aa17.7■□□□□ 0.42
AP3B1-203ENST00000517940 HRCP23327 699 aa17.7■□□□□ 0.42
AP3B1-203ENST00000517940 NOS1P29475 1434 aa17.68■□□□□ 0.42
AP3B1-203ENST00000517940 FBXO31Q5XUX0 539 aaPredicted RBP17.68■□□□□ 0.42
AP3B1-203ENST00000517940 PLA2R1Q13018 1463 aa17.68■□□□□ 0.42
AP3B1-203ENST00000517940 RPRD2Q5VT52 1461 aaKnown RBP17.67■□□□□ 0.42
AP3B1-203ENST00000517940 TRIM52Q96A61 297 aa17.66■□□□□ 0.42
AP3B1-203ENST00000517940 SPHKAPQ2M3C7 1700 aa17.66■□□□□ 0.42
AP3B1-203ENST00000517940 MYO3AQ8NEV4 1616 aa17.65■□□□□ 0.42
AP3B1-203ENST00000517940 UGGT1Q9NYU2 1555 aa17.65■□□□□ 0.42
AP3B1-203ENST00000517940 PIK3C2BO00750 1634 aa17.65■□□□□ 0.42
AP3B1-203ENST00000517940 PTPRTO14522 1441 aa17.64■□□□□ 0.42
AP3B1-203ENST00000517940 MPHOSPH9Q99550 1183 aa17.64■□□□□ 0.41
AP3B1-203ENST00000517940 FOXD1Q16676 465 aa17.62■□□□□ 0.41
AP3B1-203ENST00000517940 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
AP3B1-203ENST00000517940 ESF1Q9H501 851 aaKnown RBP17.62■□□□□ 0.41
AP3B1-203ENST00000517940 TRPM2O94759 1503 aa17.62■□□□□ 0.41
AP3B1-203ENST00000517940 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
AP3B1-203ENST00000517940 SETD1BQ9UPS6 1966 aaKnown RBP17.61■□□□□ 0.41
AP3B1-203ENST00000517940 PKD2Q13563 968 aa17.61■□□□□ 0.41
AP3B1-203ENST00000517940 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
AP3B1-203ENST00000517940 DHX57Q6P158 1386 aaKnown RBP17.6■□□□□ 0.41
AP3B1-203ENST00000517940 TNRQ92752 1358 aa17.6■□□□□ 0.41
AP3B1-203ENST00000517940 CLTCL1P53675 1640 aa17.6■□□□□ 0.41
AP3B1-203ENST00000517940 LMTK3Q96Q04 1460 aa17.58■□□□□ 0.41
AP3B1-203ENST00000517940 CEP170BQ9Y4F5 1589 aaPredicted RBP17.57■□□□□ 0.4
AP3B1-203ENST00000517940 MYO5BQ9ULV0 1848 aa17.56■□□□□ 0.4
AP3B1-203ENST00000517940 UBR1Q8IWV7 1749 aa17.55■□□□□ 0.4
AP3B1-203ENST00000517940 ANKRD30BQ9BXX2 1392 aa17.55■□□□□ 0.4
AP3B1-203ENST00000517940 ACIN1Q9UKV3 1341 aaKnown RBP17.54■□□□□ 0.4
AP3B1-203ENST00000517940 TMEM131LA2VDJ0 1609 aa17.54■□□□□ 0.4
AP3B1-203ENST00000517940 A2ML1A8K2U0 1454 aa17.53■□□□□ 0.4
AP3B1-203ENST00000517940 NLRP1Q9C000 1473 aa17.53■□□□□ 0.4
AP3B1-203ENST00000517940 ADGRB3O60242 1522 aa17.52■□□□□ 0.39
AP3B1-203ENST00000517940 KDM5AP29375 1690 aaKnown RBP17.52■□□□□ 0.39
AP3B1-203ENST00000517940 IDI1Q13907 227 aa17.51■□□□□ 0.39
AP3B1-203ENST00000517940 UHRF1BP1Q6BDS2 1440 aa17.5■□□□□ 0.39
AP3B1-203ENST00000517940 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
AP3B1-203ENST00000517940 KIF1BO60333 1816 aa17.46■□□□□ 0.39
AP3B1-203ENST00000517940 SLC52A1Q9NWF4 448 aa17.45■□□□□ 0.38
AP3B1-203ENST00000517940 ARHGAP23Q9P227 1491 aa17.44■□□□□ 0.38
AP3B1-203ENST00000517940 STRCQ7RTU9 1775 aa17.44■□□□□ 0.38
AP3B1-203ENST00000517940 NEURL4Q96JN8 1562 aa17.44■□□□□ 0.38
AP3B1-203ENST00000517940 SLIT1O75093 1534 aa17.43■□□□□ 0.38
AP3B1-203ENST00000517940 CCDC144AA2RUR9 1427 aa17.43■□□□□ 0.38
AP3B1-203ENST00000517940 IFT172Q9UG01 1749 aa17.43■□□□□ 0.38
AP3B1-203ENST00000517940 ZFYVE9O95405 1425 aa17.42■□□□□ 0.38
AP3B1-203ENST00000517940 HSPA2P54652 639 aa17.42■□□□□ 0.38
AP3B1-203ENST00000517940 NEXMIFQ5QGS0 1516 aa17.42■□□□□ 0.38
AP3B1-203ENST00000517940 PPLO60437 1756 aa17.4■□□□□ 0.38
AP3B1-203ENST00000517940 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
AP3B1-203ENST00000517940 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
AP3B1-203ENST00000517940 TMEM2Q9UHN6 1383 aa17.38■□□□□ 0.37
AP3B1-203ENST00000517940 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
AP3B1-203ENST00000517940 LTKP29376 864 aa17.35■□□□□ 0.37
AP3B1-203ENST00000517940 RIMS2Q9UQ26 1411 aa17.35■□□□□ 0.37
AP3B1-203ENST00000517940 NRXN3Q9Y4C0 1643 aa17.35■□□□□ 0.37
AP3B1-203ENST00000517940 SCAF11Q99590 1463 aaKnown RBP17.32■□□□□ 0.36
AP3B1-203ENST00000517940 CHGAP10645 457 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms