RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 FAM135AQ9P2D6 1515 aa14.68□□□□□ -0.06
LINCR-0001-201ENST00000517732 TOM1O60784 492 aa14.67□□□□□ -0.06
LINCR-0001-201ENST00000517732 MED1Q15648 1581 aaPredicted RBP14.67□□□□□ -0.06
LINCR-0001-201ENST00000517732 RTEL1-TNFRSF6BF6WH68 1400 aa14.66□□□□□ -0.06
LINCR-0001-201ENST00000517732 KDM5DQ9BY66 1539 aa14.66□□□□□ -0.06
LINCR-0001-201ENST00000517732 NEURL4Q96JN8 1562 aa14.65□□□□□ -0.06
LINCR-0001-201ENST00000517732 TNRQ92752 1358 aa14.65□□□□□ -0.06
LINCR-0001-201ENST00000517732 SHANK2Q9UPX8 1470 aa14.64□□□□□ -0.07
LINCR-0001-201ENST00000517732 DHX29Q7Z478 1369 aaKnown RBP14.64□□□□□ -0.07
LINCR-0001-201ENST00000517732 PIP4K2BP78356 416 aa14.64□□□□□ -0.07
LINCR-0001-201ENST00000517732 PZPP20742 1482 aa14.63□□□□□ -0.07
LINCR-0001-201ENST00000517732 MBD5Q9P267 1494 aa14.63□□□□□ -0.07
LINCR-0001-201ENST00000517732 KIF3BO15066 747 aa14.62□□□□□ -0.07
LINCR-0001-201ENST00000517732 HSPA1LP34931 641 aa14.62□□□□□ -0.07
LINCR-0001-201ENST00000517732 CCDC141Q6ZP82 1450 aa14.62□□□□□ -0.07
LINCR-0001-201ENST00000517732 ANKLE2Q86XL3 938 aa14.61□□□□□ -0.07
LINCR-0001-201ENST00000517732 DEPDC5O75140 1603 aa14.61□□□□□ -0.07
LINCR-0001-201ENST00000517732 IQGAP1P46940 1657 aa14.61□□□□□ -0.07
LINCR-0001-201ENST00000517732 ZNF644Q9H582 1327 aaPredicted RBP14.61□□□□□ -0.07
LINCR-0001-201ENST00000517732 UGGT1Q9NYU2 1555 aa14.6□□□□□ -0.07
LINCR-0001-201ENST00000517732 CEP162Q5TB80 1403 aa14.6□□□□□ -0.07
LINCR-0001-201ENST00000517732 NLRP1Q9C000 1473 aa14.6□□□□□ -0.07
LINCR-0001-201ENST00000517732 WASHC2CQ9Y4E1 1318 aa14.6□□□□□ -0.07
LINCR-0001-201ENST00000517732 THEMISQ8N1K5 641 aaPredicted RBP14.59□□□□□ -0.07
LINCR-0001-201ENST00000517732 ZC3H13Q5T200 1668 aaKnown RBP14.58□□□□□ -0.07
LINCR-0001-201ENST00000517732 CAMSAP2Q08AD1 1489 aa14.58□□□□□ -0.08
LINCR-0001-201ENST00000517732 RSPH4AQ5TD94 716 aa14.58□□□□□ -0.08
LINCR-0001-201ENST00000517732 FBXO31Q5XUX0 539 aaPredicted RBP14.58□□□□□ -0.08
LINCR-0001-201ENST00000517732 VWDEQ8N2E2 1590 aa14.58□□□□□ -0.08
LINCR-0001-201ENST00000517732 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.58□□□□□ -0.08
LINCR-0001-201ENST00000517732 NPHP4O75161 1426 aaPredicted RBP14.58□□□□□ -0.08
LINCR-0001-201ENST00000517732 SYNMO15061 1565 aa14.57□□□□□ -0.08
LINCR-0001-201ENST00000517732 MED14O60244 1454 aa14.57□□□□□ -0.08
LINCR-0001-201ENST00000517732 RNF17Q9BXT8 1623 aaKnown RBP14.56□□□□□ -0.08
LINCR-0001-201ENST00000517732 MIA2Q96PC5 1412 aa14.56□□□□□ -0.08
LINCR-0001-201ENST00000517732 ARHGEF5Q12774 1597 aa14.56□□□□□ -0.08
LINCR-0001-201ENST00000517732 CFAP65Q6ZU64 1925 aaKnown RBP14.55□□□□□ -0.08
LINCR-0001-201ENST00000517732 NCOA2Q15596 1464 aa14.54□□□□□ -0.08
LINCR-0001-201ENST00000517732 TSPY4P0CV99 314 aa14.53□□□□□ -0.08
LINCR-0001-201ENST00000517732 TSPY10P0CW01 314 aa14.53□□□□□ -0.08
LINCR-0001-201ENST00000517732 STRCP1A6NGW2 1772 aa14.52□□□□□ -0.08
LINCR-0001-201ENST00000517732 EIF2AK4Q9P2K8 1649 aaKnown RBP14.52□□□□□ -0.08
LINCR-0001-201ENST00000517732 CEP152O94986 1710 aa14.51□□□□□ -0.09
LINCR-0001-201ENST00000517732 ALKQ9UM73 1620 aa14.5□□□□□ -0.09
LINCR-0001-201ENST00000517732 UBR1Q8IWV7 1749 aa14.49□□□□□ -0.09
LINCR-0001-201ENST00000517732 MAST1Q9Y2H9 1570 aa14.49□□□□□ -0.09
LINCR-0001-201ENST00000517732 ABCC3O15438 1527 aa14.49□□□□□ -0.09
LINCR-0001-201ENST00000517732 LRRC7Q96NW7 1537 aa14.48□□□□□ -0.09
LINCR-0001-201ENST00000517732 ERVK-7P63135 1459 aa14.47□□□□□ -0.09
LINCR-0001-201ENST00000517732 SCAF11Q99590 1463 aaKnown RBP14.44□□□□□ -0.1
LINCR-0001-201ENST00000517732 XIRP1Q702N8 1843 aaKnown RBP14.43□□□□□ -0.1
LINCR-0001-201ENST00000517732 MROH1Q8NDA8 1641 aa14.43□□□□□ -0.1
LINCR-0001-201ENST00000517732 SLIT1O75093 1534 aa14.41□□□□□ -0.1
LINCR-0001-201ENST00000517732 DUOX2Q9NRD8 1548 aa14.41□□□□□ -0.1
LINCR-0001-201ENST00000517732 EID1Q9Y6B2 187 aa14.39□□□□□ -0.11
LINCR-0001-201ENST00000517732 LRRC9Q6ZRR7 1453 aa14.38□□□□□ -0.11
LINCR-0001-201ENST00000517732 ARHGAP23Q9P227 1491 aa14.38□□□□□ -0.11
LINCR-0001-201ENST00000517732 TXNDC2Q86VQ3 553 aa14.38□□□□□ -0.11
LINCR-0001-201ENST00000517732 CROCC2H7BZ55 1655 aa14.38□□□□□ -0.11
LINCR-0001-201ENST00000517732 PIK3C2BO00750 1634 aa14.37□□□□□ -0.11
LINCR-0001-201ENST00000517732 PRDM15P57071 1507 aaPredicted RBP14.37□□□□□ -0.11
LINCR-0001-201ENST00000517732 KDM5AP29375 1690 aaKnown RBP14.37□□□□□ -0.11
LINCR-0001-201ENST00000517732 ARHGAP31Q2M1Z3 1444 aa14.36□□□□□ -0.11
LINCR-0001-201ENST00000517732 MYOM3Q5VTT5 1437 aa14.36□□□□□ -0.11
LINCR-0001-201ENST00000517732 STAG3Q9UJ98 1225 aa14.36□□□□□ -0.11
LINCR-0001-201ENST00000517732 VPS8Q8N3P4 1428 aa14.34□□□□□ -0.11
LINCR-0001-201ENST00000517732 ERBINQ96RT1 1412 aa14.34□□□□□ -0.11
LINCR-0001-201ENST00000517732 KANK1Q14678 1352 aa14.34□□□□□ -0.11
LINCR-0001-201ENST00000517732 ROBO1Q9Y6N7 1651 aa14.33□□□□□ -0.11
LINCR-0001-201ENST00000517732 LTKP29376 864 aa14.33□□□□□ -0.12
LINCR-0001-201ENST00000517732 FAM135BQ49AJ0 1406 aa14.32□□□□□ -0.12
LINCR-0001-201ENST00000517732 MAP3K1Q13233 1512 aa14.32□□□□□ -0.12
LINCR-0001-201ENST00000517732 EFCAB6Q5THR3 1501 aa14.32□□□□□ -0.12
LINCR-0001-201ENST00000517732 KIF15Q9NS87 1388 aa14.32□□□□□ -0.12
LINCR-0001-201ENST00000517732 TMEM2Q9UHN6 1383 aa14.31□□□□□ -0.12
LINCR-0001-201ENST00000517732 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.3□□□□□ -0.12
LINCR-0001-201ENST00000517732 RGS17Q9UGC6 210 aaPredicted RBP14.3□□□□□ -0.12
LINCR-0001-201ENST00000517732 TMEM94Q12767 1356 aa14.3□□□□□ -0.12
LINCR-0001-201ENST00000517732 PTPN23Q9H3S7 1636 aa14.3□□□□□ -0.12
LINCR-0001-201ENST00000517732 PHLPP1O60346 1717 aa14.29□□□□□ -0.12
LINCR-0001-201ENST00000517732 KCNA6P17658 529 aa14.28□□□□□ -0.12
LINCR-0001-201ENST00000517732 NWD1Q149M9 1564 aa14.27□□□□□ -0.12
LINCR-0001-201ENST00000517732 NKTRP30414 1462 aaKnown RBP14.27□□□□□ -0.12
LINCR-0001-201ENST00000517732 ADRA2BP18089 450 aa14.27□□□□□ -0.13
LINCR-0001-201ENST00000517732 PROSER2Q86WR7 435 aaPredicted RBP14.27□□□□□ -0.13
LINCR-0001-201ENST00000517732 RRP7BPQ9NSQ0 103 aa14.27□□□□□ -0.13
LINCR-0001-201ENST00000517732 ADGRB3O60242 1522 aa14.26□□□□□ -0.13
LINCR-0001-201ENST00000517732 LMTK2Q8IWU2 1503 aa14.25□□□□□ -0.13
LINCR-0001-201ENST00000517732 MSH6P52701 1360 aa14.25□□□□□ -0.13
LINCR-0001-201ENST00000517732 SETD1AO15047 1707 aaKnown RBP14.25□□□□□ -0.13
LINCR-0001-201ENST00000517732 BCANQ96GW7 911 aa14.25□□□□□ -0.13
LINCR-0001-201ENST00000517732 TET3O43151 1660 aa14.25□□□□□ -0.13
LINCR-0001-201ENST00000517732 MYO5BQ9ULV0 1848 aa14.25□□□□□ -0.13
LINCR-0001-201ENST00000517732 ABCC5O15440 1437 aa14.24□□□□□ -0.13
LINCR-0001-201ENST00000517732 DAPK1P53355 1430 aa14.24□□□□□ -0.13
LINCR-0001-201ENST00000517732 KANK4Q5T7N3 995 aaPredicted RBP14.24□□□□□ -0.13
LINCR-0001-201ENST00000517732 POTEAQ6S8J7 498 aa14.24□□□□□ -0.13
LINCR-0001-201ENST00000517732 CHD2O14647 1828 aaKnown RBP14.24□□□□□ -0.13
LINCR-0001-201ENST00000517732 ANKRD30AQ9BXX3 1397 aa14.23□□□□□ -0.13
LINCR-0001-201ENST00000517732 APLP2Q06481 763 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms