RNA–Protein interactions for RNA: ENST00000517479.1

CDK16-209, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-209ENST00000517479 KDM5DQ9BY66 1539 aa22.82■■□□□ 1.24
CDK16-209ENST00000517479 NPATQ14207 1427 aa22.82■■□□□ 1.24
CDK16-209ENST00000517479 PTPRKQ15262 1439 aa22.82■■□□□ 1.24
CDK16-209ENST00000517479 MROH1Q8NDA8 1641 aa22.81■■□□□ 1.24
CDK16-209ENST00000517479 ZNF142P52746 1687 aaPredicted RBP22.79■■□□□ 1.24
CDK16-209ENST00000517479 CEP152O94986 1710 aa22.79■■□□□ 1.24
CDK16-209ENST00000517479 DUOX2Q9NRD8 1548 aa22.77■■□□□ 1.24
CDK16-209ENST00000517479 PPP6R1Q9UPN7 881 aa22.76■■□□□ 1.23
CDK16-209ENST00000517479 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
CDK16-209ENST00000517479 FAM135AQ9P2D6 1515 aa22.75■■□□□ 1.23
CDK16-209ENST00000517479 KIF15Q9NS87 1388 aa22.75■■□□□ 1.23
CDK16-209ENST00000517479 ABCC3O15438 1527 aa22.74■■□□□ 1.23
CDK16-209ENST00000517479 CEP170BQ9Y4F5 1589 aaPredicted RBP22.74■■□□□ 1.23
CDK16-209ENST00000517479 CFAP65Q6ZU64 1925 aaKnown RBP22.74■■□□□ 1.23
CDK16-209ENST00000517479 ZC3H13Q5T200 1668 aaKnown RBP22.74■■□□□ 1.23
CDK16-209ENST00000517479 RRP7BPQ9NSQ0 103 aa22.73■■□□□ 1.23
CDK16-209ENST00000517479 CHIC2Q9UKJ5 165 aa22.73■■□□□ 1.23
CDK16-209ENST00000517479 CAMSAP1Q5T5Y3 1602 aa22.72■■□□□ 1.23
CDK16-209ENST00000517479 WASHC2CQ9Y4E1 1318 aa22.72■■□□□ 1.23
CDK16-209ENST00000517479 PZPP20742 1482 aa22.72■■□□□ 1.23
CDK16-209ENST00000517479 FAM50AQ14320 339 aaKnown RBP22.71■■□□□ 1.23
CDK16-209ENST00000517479 FBXO31Q5XUX0 539 aaPredicted RBP22.71■■□□□ 1.23
CDK16-209ENST00000517479 ILDR1Q86SU0 546 aaPredicted RBP22.71■■□□□ 1.23
CDK16-209ENST00000517479 DEPDC5O75140 1603 aa22.69■■□□□ 1.22
CDK16-209ENST00000517479 PRDM15P57071 1507 aaPredicted RBP22.68■■□□□ 1.22
CDK16-209ENST00000517479 NCOA1Q15788 1441 aa22.68■■□□□ 1.22
CDK16-209ENST00000517479 ERBINQ96RT1 1412 aa22.68■■□□□ 1.22
CDK16-209ENST00000517479 ADGRL2O95490 1459 aa22.66■■□□□ 1.22
CDK16-209ENST00000517479 TNRQ92752 1358 aa22.64■■□□□ 1.22
CDK16-209ENST00000517479 ANKRD30AQ9BXX3 1397 aa22.63■■□□□ 1.21
CDK16-209ENST00000517479 A2ML1A8K2U0 1454 aa22.63■■□□□ 1.21
CDK16-209ENST00000517479 SPATA31D1Q6ZQQ2 1576 aa22.61■■□□□ 1.21
CDK16-209ENST00000517479 NCKAP5LQ9HCH0 1330 aa22.59■■□□□ 1.21
CDK16-209ENST00000517479 ERVK-7P63135 1459 aa22.59■■□□□ 1.21
CDK16-209ENST00000517479 PTPRTO14522 1441 aa22.58■■□□□ 1.21
CDK16-209ENST00000517479 POLR1AO95602 1720 aaPredicted RBP22.58■■□□□ 1.21
CDK16-209ENST00000517479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.58■■□□□ 1.21
CDK16-209ENST00000517479 PLA2R1Q13018 1463 aa22.58■■□□□ 1.2
CDK16-209ENST00000517479 VWDEQ8N2E2 1590 aa22.57■■□□□ 1.2
CDK16-209ENST00000517479 DMRT2Q9Y5R5 561 aa22.55■■□□□ 1.2
CDK16-209ENST00000517479 NLRP1Q9C000 1473 aa22.54■■□□□ 1.2
CDK16-209ENST00000517479 NEURL4Q96JN8 1562 aa22.53■■□□□ 1.2
CDK16-209ENST00000517479 UGGT1Q9NYU2 1555 aa22.53■■□□□ 1.2
CDK16-209ENST00000517479 ANKRD50Q9ULJ7 1429 aa22.52■■□□□ 1.2
CDK16-209ENST00000517479 UBR1Q8IWV7 1749 aa22.51■■□□□ 1.19
CDK16-209ENST00000517479 LMTK2Q8IWU2 1503 aa22.51■■□□□ 1.19
CDK16-209ENST00000517479 LTBP4Q8N2S1 1624 aa22.5■■□□□ 1.19
CDK16-209ENST00000517479 ARHGAP31Q2M1Z3 1444 aa22.5■■□□□ 1.19
CDK16-209ENST00000517479 ITGAEP38570 1179 aa22.5■■□□□ 1.19
CDK16-209ENST00000517479 CERKQ8TCT0 537 aa22.49■■□□□ 1.19
CDK16-209ENST00000517479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.49■■□□□ 1.19
CDK16-209ENST00000517479 EFCAB6Q5THR3 1501 aa22.48■■□□□ 1.19
CDK16-209ENST00000517479 UNC13BO14795 1591 aa22.48■■□□□ 1.19
CDK16-209ENST00000517479 FBXO41Q8TF61 875 aa22.48■■□□□ 1.19
CDK16-209ENST00000517479 KANK1Q14678 1352 aa22.48■■□□□ 1.19
CDK16-209ENST00000517479 PIK3C2BO00750 1634 aa22.46■■□□□ 1.19
CDK16-209ENST00000517479 PKD2Q13563 968 aa22.46■■□□□ 1.19
CDK16-209ENST00000517479 SYNMO15061 1565 aa22.46■■□□□ 1.19
CDK16-209ENST00000517479 ROCK1Q13464 1354 aa22.45■■□□□ 1.18
CDK16-209ENST00000517479 RRBP1Q9P2E9 1410 aaKnown RBP22.45■■□□□ 1.18
CDK16-209ENST00000517479 TET3O43151 1660 aa22.43■■□□□ 1.18
CDK16-209ENST00000517479 GCC2Q8IWJ2 1684 aa22.43■■□□□ 1.18
CDK16-209ENST00000517479 ZNF335Q9H4Z2 1342 aaPredicted RBP22.42■■□□□ 1.18
CDK16-209ENST00000517479 THEMISQ8N1K5 641 aaPredicted RBP22.4■■□□□ 1.18
CDK16-209ENST00000517479 E9PCH4 1651 aa22.39■■□□□ 1.18
CDK16-209ENST00000517479 IQGAP1P46940 1657 aa22.39■■□□□ 1.18
CDK16-209ENST00000517479 IQGAP3Q86VI3 1631 aa22.39■■□□□ 1.18
CDK16-209ENST00000517479 MYO5BQ9ULV0 1848 aa22.38■■□□□ 1.17
CDK16-209ENST00000517479 NOS1P29475 1434 aa22.37■■□□□ 1.17
CDK16-209ENST00000517479 MED14O60244 1454 aa22.35■■□□□ 1.17
CDK16-209ENST00000517479 ANKLE2Q86XL3 938 aa22.35■■□□□ 1.17
CDK16-209ENST00000517479 NPHP4O75161 1426 aaPredicted RBP22.34■■□□□ 1.17
CDK16-209ENST00000517479 KDM5AP29375 1690 aaKnown RBP22.34■■□□□ 1.17
CDK16-209ENST00000517479 ARHGAP23Q9P227 1491 aa22.34■■□□□ 1.17
CDK16-209ENST00000517479 STRCP1A6NGW2 1772 aa22.33■■□□□ 1.17
CDK16-209ENST00000517479 SLIT1O75093 1534 aa22.33■■□□□ 1.17
CDK16-209ENST00000517479 RPRD2Q5VT52 1461 aaKnown RBP22.32■■□□□ 1.16
CDK16-209ENST00000517479 IDI1Q13907 227 aa22.31■■□□□ 1.16
CDK16-209ENST00000517479 ADGRB3O60242 1522 aa22.31■■□□□ 1.16
CDK16-209ENST00000517479 SCAF11Q99590 1463 aaKnown RBP22.29■■□□□ 1.16
CDK16-209ENST00000517479 LTKP29376 864 aa22.29■■□□□ 1.16
CDK16-209ENST00000517479 NUP155O75694 1391 aa22.27■■□□□ 1.16
CDK16-209ENST00000517479 NAIPQ13075 1403 aa22.27■■□□□ 1.16
CDK16-209ENST00000517479 IQSEC2Q5JU85 1478 aa22.27■■□□□ 1.16
CDK16-209ENST00000517479 TMEM2Q9UHN6 1383 aa22.25■■□□□ 1.15
CDK16-209ENST00000517479 TMEM131LA2VDJ0 1609 aa22.24■■□□□ 1.15
CDK16-209ENST00000517479 STAG3Q9UJ98 1225 aa22.24■■□□□ 1.15
CDK16-209ENST00000517479 TXNDC2Q86VQ3 553 aa22.23■■□□□ 1.15
CDK16-209ENST00000517479 SPHKAPQ2M3C7 1700 aa22.23■■□□□ 1.15
CDK16-209ENST00000517479 CPS1P31327 1500 aa22.21■■□□□ 1.15
CDK16-209ENST00000517479 SLC52A1Q9NWF4 448 aa22.2■■□□□ 1.14
CDK16-209ENST00000517479 HFM1A2PYH4 1435 aa22.18■■□□□ 1.14
CDK16-209ENST00000517479 XIRP1Q702N8 1843 aaKnown RBP22.17■■□□□ 1.14
CDK16-209ENST00000517479 EID1Q9Y6B2 187 aa22.16■■□□□ 1.14
CDK16-209ENST00000517479 ZFYVE9O95405 1425 aa22.15■■□□□ 1.14
CDK16-209ENST00000517479 SENP3Q9H4L4 574 aaPredicted RBP22.15■■□□□ 1.14
CDK16-209ENST00000517479 LRRC7Q96NW7 1537 aa22.13■■□□□ 1.13
CDK16-209ENST00000517479 CLTCL1P53675 1640 aa22.12■■□□□ 1.13
CDK16-209ENST00000517479 ALKQ9UM73 1620 aa22.12■■□□□ 1.13
CDK16-209ENST00000517479 RIMS2Q9UQ26 1411 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms