RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 CROCC2H7BZ55 1655 aa13.93□□□□□ -0.18
PABPC1-202ENST00000517403 MAP3K1Q13233 1512 aa13.92□□□□□ -0.18
PABPC1-202ENST00000517403 RNF17Q9BXT8 1623 aaKnown RBP13.92□□□□□ -0.18
PABPC1-202ENST00000517403 NEURL4Q96JN8 1562 aa13.91□□□□□ -0.18
PABPC1-202ENST00000517403 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.19
PABPC1-202ENST00000517403 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.19
PABPC1-202ENST00000517403 DHX29Q7Z478 1369 aaKnown RBP13.89□□□□□ -0.19
PABPC1-202ENST00000517403 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
PABPC1-202ENST00000517403 CEP152O94986 1710 aa13.89□□□□□ -0.19
PABPC1-202ENST00000517403 MYOM3Q5VTT5 1437 aa13.89□□□□□ -0.19
PABPC1-202ENST00000517403 TCOF1Q13428 1488 aaKnown RBP13.88□□□□□ -0.19
PABPC1-202ENST00000517403 GGT6Q6P531 493 aa13.88□□□□□ -0.19
PABPC1-202ENST00000517403 CERKQ8TCT0 537 aa13.88□□□□□ -0.19
PABPC1-202ENST00000517403 PTPRTO14522 1441 aa13.88□□□□□ -0.19
PABPC1-202ENST00000517403 ABCC3O15438 1527 aa13.86□□□□□ -0.19
PABPC1-202ENST00000517403 PZPP20742 1482 aa13.86□□□□□ -0.19
PABPC1-202ENST00000517403 PTPN23Q9H3S7 1636 aa13.86□□□□□ -0.19
PABPC1-202ENST00000517403 FBXO31Q5XUX0 539 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-202ENST00000517403 EIF2AK4Q9P2K8 1649 aaKnown RBP13.85□□□□□ -0.19
PABPC1-202ENST00000517403 NCKAP5LQ9HCH0 1330 aa13.85□□□□□ -0.19
PABPC1-202ENST00000517403 POLR1AO95602 1720 aaPredicted RBP13.84□□□□□ -0.19
PABPC1-202ENST00000517403 PLA2R1Q13018 1463 aa13.84□□□□□ -0.19
PABPC1-202ENST00000517403 A2ML1A8K2U0 1454 aa13.83□□□□□ -0.2
PABPC1-202ENST00000517403 ABCC5O15440 1437 aa13.82□□□□□ -0.2
PABPC1-202ENST00000517403 FAM135AQ9P2D6 1515 aa13.82□□□□□ -0.2
PABPC1-202ENST00000517403 KIF3BO15066 747 aa13.82□□□□□ -0.2
PABPC1-202ENST00000517403 ZC3H13Q5T200 1668 aaKnown RBP13.82□□□□□ -0.2
PABPC1-202ENST00000517403 SPATA31D1Q6ZQQ2 1576 aa13.81□□□□□ -0.2
PABPC1-202ENST00000517403 DEPDC5O75140 1603 aa13.81□□□□□ -0.2
PABPC1-202ENST00000517403 ZNF335Q9H4Z2 1342 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-202ENST00000517403 MIA2Q96PC5 1412 aa13.81□□□□□ -0.2
PABPC1-202ENST00000517403 PRDM15P57071 1507 aaPredicted RBP13.8□□□□□ -0.2
PABPC1-202ENST00000517403 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
PABPC1-202ENST00000517403 ESF1Q9H501 851 aaKnown RBP13.79□□□□□ -0.2
PABPC1-202ENST00000517403 TNRQ92752 1358 aa13.79□□□□□ -0.2
PABPC1-202ENST00000517403 SHANK2Q9UPX8 1470 aa13.79□□□□□ -0.2
PABPC1-202ENST00000517403 NPM3O75607 178 aaKnown RBP13.78□□□□□ -0.2
PABPC1-202ENST00000517403 FGD6Q6ZV73 1430 aa13.78□□□□□ -0.2
PABPC1-202ENST00000517403 ERVK-7P63135 1459 aa13.78□□□□□ -0.2
PABPC1-202ENST00000517403 ALKQ9UM73 1620 aa13.78□□□□□ -0.2
PABPC1-202ENST00000517403 DAPK1P53355 1430 aa13.77□□□□□ -0.21
PABPC1-202ENST00000517403 VWDEQ8N2E2 1590 aa13.77□□□□□ -0.21
PABPC1-202ENST00000517403 UBR1Q8IWV7 1749 aa13.76□□□□□ -0.21
PABPC1-202ENST00000517403 DUOX2Q9NRD8 1548 aa13.76□□□□□ -0.21
PABPC1-202ENST00000517403 CFAP65Q6ZU64 1925 aaKnown RBP13.75□□□□□ -0.21
PABPC1-202ENST00000517403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.73□□□□□ -0.21
PABPC1-202ENST00000517403 KIF15Q9NS87 1388 aa13.73□□□□□ -0.21
PABPC1-202ENST00000517403 UGGT1Q9NYU2 1555 aa13.73□□□□□ -0.21
PABPC1-202ENST00000517403 SYNMO15061 1565 aa13.72□□□□□ -0.21
PABPC1-202ENST00000517403 IQGAP1P46940 1657 aa13.72□□□□□ -0.21
PABPC1-202ENST00000517403 IQSEC2Q5JU85 1478 aa13.71□□□□□ -0.21
PABPC1-202ENST00000517403 NLRP1Q9C000 1473 aa13.71□□□□□ -0.21
PABPC1-202ENST00000517403 PIK3C2BO00750 1634 aa13.71□□□□□ -0.22
PABPC1-202ENST00000517403 WASHC2CQ9Y4E1 1318 aa13.7□□□□□ -0.22
PABPC1-202ENST00000517403 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
PABPC1-202ENST00000517403 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
PABPC1-202ENST00000517403 ADGRL2O95490 1459 aa13.69□□□□□ -0.22
PABPC1-202ENST00000517403 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
PABPC1-202ENST00000517403 MED14O60244 1454 aa13.68□□□□□ -0.22
PABPC1-202ENST00000517403 XIRP1Q702N8 1843 aaKnown RBP13.67□□□□□ -0.22
PABPC1-202ENST00000517403 TSPY4P0CV99 314 aa13.67□□□□□ -0.22
PABPC1-202ENST00000517403 TSPY10P0CW01 314 aa13.67□□□□□ -0.22
PABPC1-202ENST00000517403 RRP7BPQ9NSQ0 103 aa13.67□□□□□ -0.22
PABPC1-202ENST00000517403 LMTK2Q8IWU2 1503 aa13.67□□□□□ -0.22
PABPC1-202ENST00000517403 ARHGAP23Q9P227 1491 aa13.67□□□□□ -0.22
PABPC1-202ENST00000517403 EFCAB6Q5THR3 1501 aa13.66□□□□□ -0.22
PABPC1-202ENST00000517403 NPHP4O75161 1426 aaPredicted RBP13.65□□□□□ -0.22
PABPC1-202ENST00000517403 ARHGAP31Q2M1Z3 1444 aa13.65□□□□□ -0.22
PABPC1-202ENST00000517403 ZBTB22O15209 634 aa13.65□□□□□ -0.22
PABPC1-202ENST00000517403 PKD2Q13563 968 aa13.65□□□□□ -0.22
PABPC1-202ENST00000517403 CHIC2Q9UKJ5 165 aa13.65□□□□□ -0.22
PABPC1-202ENST00000517403 SLIT1O75093 1534 aa13.64□□□□□ -0.23
PABPC1-202ENST00000517403 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
PABPC1-202ENST00000517403 UNC13BO14795 1591 aa13.63□□□□□ -0.23
PABPC1-202ENST00000517403 ILDR2Q71H61 639 aa13.63□□□□□ -0.23
PABPC1-202ENST00000517403 CPS1P31327 1500 aa13.61□□□□□ -0.23
PABPC1-202ENST00000517403 NOS1P29475 1434 aa13.61□□□□□ -0.23
PABPC1-202ENST00000517403 LRRC7Q96NW7 1537 aa13.6□□□□□ -0.23
PABPC1-202ENST00000517403 LTKP29376 864 aa13.6□□□□□ -0.23
PABPC1-202ENST00000517403 SCAF11Q99590 1463 aaKnown RBP13.6□□□□□ -0.23
PABPC1-202ENST00000517403 E9PCH4 1651 aa13.59□□□□□ -0.23
PABPC1-202ENST00000517403 TET3O43151 1660 aa13.59□□□□□ -0.23
PABPC1-202ENST00000517403 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
PABPC1-202ENST00000517403 GCC2Q8IWJ2 1684 aa13.59□□□□□ -0.23
PABPC1-202ENST00000517403 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
PABPC1-202ENST00000517403 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.24
PABPC1-202ENST00000517403 ANKRD30AQ9BXX3 1397 aa13.58□□□□□ -0.24
PABPC1-202ENST00000517403 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
PABPC1-202ENST00000517403 ANKRD50Q9ULJ7 1429 aa13.56□□□□□ -0.24
PABPC1-202ENST00000517403 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
PABPC1-202ENST00000517403 TMEM131LA2VDJ0 1609 aa13.54□□□□□ -0.24
PABPC1-202ENST00000517403 IQGAP3Q86VI3 1631 aa13.54□□□□□ -0.24
PABPC1-202ENST00000517403 FAM50AQ14320 339 aaKnown RBP13.54□□□□□ -0.24
PABPC1-202ENST00000517403 ANKLE2Q86XL3 938 aa13.54□□□□□ -0.24
PABPC1-202ENST00000517403 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-202ENST00000517403 MED1Q15648 1581 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-202ENST00000517403 DISP3Q9P2K9 1392 aa13.53□□□□□ -0.24
PABPC1-202ENST00000517403 TMEM2Q9UHN6 1383 aa13.53□□□□□ -0.24
PABPC1-202ENST00000517403 IDI1Q13907 227 aa13.52□□□□□ -0.25
PABPC1-202ENST00000517403 ZFYVE9O95405 1425 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms